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RXRA target genes for motif:
RXRA_nuclearreceptor_DBD_dimeric_14_2

The RXRA_nuclearreceptor_DBD_dimeric_14_2 motif was discovered for RXRA and was found in the SELEX repository.

RXRA motif sequence logo


RXRA motif positions


 

RXRA target gene list


Download all RXRA TF binding sites
GeneEntrez# of SitesStrandChromosomePromoter LocationTSS
SH3RF2 153769 1 chr5 + 145311125-145316625 145316125
KRI1 65095 2 chr19 - 10676202-10681702 10676702
SLC9A3R1 9368 2 chr17 + 72739750-72745250 72744750
SLC26A4 5172 2 chr7 + 107296079-107301579 107301079
DNAJA2 10294 2 chr16 - 47007125-47012625 47007625
PPIL2 23759 2 chr22 + 22015272-22020772 22020272
PLAUR 5329 2 chr19 - 44173998-44179498 44174498
SP1 6667 2 chr12 + 53768978-53774927 53774427
ADM 133 2 chr11 + 10321641-10327141 10326641
ANKRD2 26287 2 chr10 + 99327255-99332755 99332255
TAF8 129685 2 chr6 + 42013250-42018750 42018250
IREB2 3658 1 chr15 + 78725517-78731017 78730517
IRF1 3659 2 chr5 - 131825965-131831465 131826465
SCAP 22937 2 chr3 - 47516945-47522445 47517445
APOBR 55911 2 chr16 + 28500969-28506469 28505969
TCAIM 285343 1 chr3 + 44374610-44380443 44379943
FAM100A 124402 2 chr16 - 4664427-4669927 4664927
ATP2B3 492 1 chrX + 152796579-152802079 152801579
HIST1H2BI 8339 1 chr6 - 26216372-26221872 26216872
IK 3550 2 chr5 + 140022383-140027883 140027383
NIT2 56954 1 chr3 + 100048561-100054061 100053561
SLCO2A1 6578 2 chr3 - 133748420-133753920 133748920
TMEM190 147744 1 chr19 + 55883203-55888703 55888203
THBD 7056 1 chr20 - 23029801-23035301 23030301
ZWILCH 55055 2 chr15 + 66792430-66797930 66797430
GLT25D1 79709 2 chr19 + 17661510-17667010 17666510
CLDND2 125875 1 chr19 - 51871757-51877257 51872257
POPDC2 64091 2 chr3 - 119378904-119384404 119379404
OSTM1 28962 2 chr6 - 108395441-108400941 108395941
GYS1 2997 2 chr19 - 49496110-49501610 49496610
C11orf80 79703 2 chr11 + 66507206-66512706 66512206
MPDZ 8777 2 chr9 - 13279063-13284563 13279563
ZNF587B 84914 1 chr19 + 58356180-58361680 58361180
VPREB1 7441 1 chr22 + 22594199-22599699 22599199
GJB5 2709 2 chr1 + 35215647-35221147 35220647
SLC7A5 8140 1 chr16 - 87902600-87908100 87903100
MAFF 23764 1 chr22 + 38592938-38599526 38599026
GPR116 221395 2 chr6 - 46922175-46927675 46922675
TPM1 7168 2 chr15 + 63329837-63335337 63334837
COX5A 9377 1 chr15 - 75229995-75235495 75230495
GJA5 2702 1 chr1 - 147244984-147250484 147245484
MRPL23 6150 2 chr11 + 1963501-1969001 1968501
APBA3 9546 1 chr19 - 3761173-3766673 3761673
RPL24 6152 2 chr3 - 101405063-101410563 101405563
XXYLT1 152002 2 chr3 - 194991395-194996895 194991895
RFX5 5993 2 chr1 - 151319269-151324769 151319769
CELSR2 1952 2 chr1 + 109787640-109793140 109792640
MFAP2 4237 2 chr1 - 17306673-17313081 17307173
DNAJC18 202052 2 chr5 - 138774714-138780214 138775214
CYP3A7 1551 2 chr7 - 99332319-99337819 99332819
C3orf18 51161 2 chr3 - 50604723-50613458 50605223
DPY19L3 147991 2 chr19 + 32891654-32897521 32897021
ANKRD24 170961 2 chr19 + 4178350-4183850 4183350
AJUBA 84962 1 chr14 - 23445932-23456848 23446432
RPL4 6124 2 chr15 - 66796693-66802193 66797193
ERF 2077 2 chr19 - 42758809-42764309 42759309
UBA5 79876 1 chr3 + 132368289-132373789 132373289
ZNF219 51222 2 chr14 - 21572363-21577863 21572863
ACP1 52 1 chr2 + 259868-265368 264868
GET4 51608 2 chr7 + 911190-916690 916190
LIN9 286826 2 chr1 - 226496704-226502449 226497204
CIB1 10519 2 chr15 - 90776779-90782279 90777279
OSGEP 55644 2 chr14 - 20922767-20928267 20923267
ITGAE 3682 2 chr17 - 3704037-3709537 3704537
AHSA2 130872 2 chr2 + 61399554-61405054 61404554
DDX5 1655 2 chr17 - 62501984-62507484 62502484
CHCHD3 54927 2 chr7 - 132766328-132771828 132766828
CCDC60 160777 1 chr12 + 119767516-119773016 119772516
ATP6V1H 51606 2 chr8 - 54755102-54760871 54755602
GIMAP8 155038 2 chr7 + 150142961-150148461 150147961
RCVRN 5957 2 chr17 - 9808184-9813684 9808684
MRPL54 116541 1 chr19 + 3757664-3763164 3762664
APPL2 55198 2 chr12 - 105626683-105635008 105627183
OXA1L 5018 2 chr14 + 23230730-23236230 23235730
FUZ 80199 2 chr19 - 50316067-50321567 50316567
ADAMTSL2 9719 2 chr9 + 136392285-136400474 136399974
CTBP1 1487 2 chr4 - 1242408-1247908 1242908
ZBED6 100381270 2 chr1 + 203761650-203767150 203766650
TMEM55B 90809 2 chr14 - 20929137-20934637 20929637
HSPA2 3306 2 chr14 + 65002185-65007685 65007185
PIPOX 51268 1 chr17 + 27364917-27370417 27369917
FAM19A2 338811 2 chr12 - 62586120-62591620 62586620
TNFRSF1A 7132 2 chr12 - 6450783-6456283 6451283
RASGRP1 10125 2 chr15 - 38856507-38862007 38857007
SLC4A7 9497 2 chr3 - 27525411-27530911 27525911
NYX 60506 1 chrX + 41301712-41307212 41306712
PKP2 5318 2 chr12 - 33049280-33054780 33049780
KIF26A 26153 2 chr14 + 104600059-104605559 104605059
KDM2A 22992 1 chr11 + 66881739-66887239 66886739
CTR9 9646 1 chr11 + 10767810-10773310 10772810
BLID 414899 1 chr11 - 121986423-121991923 121986923
IL7 3574 1 chr8 - 79717258-79722758 79717758
KDELC2 143888 2 chr11 - 108368659-108374159 108369159
EHBP1L1 254102 1 chr11 + 65338508-65344008 65343508
ERAS 3266 2 chrX + 48679922-48685422 48684922
IL6ST 3572 2 chr5 - 55290321-55295821 55290821
WNT16 51384 1 chr7 + 120960420-120969589 120969089
LCLAT1 253558 2 chr2 + 30665122-30670636 30670136
CD247 919 1 chr1 - 167487347-167492847 167487847
XKR7 343702 2 chr20 + 30550804-30556304 30555804
ZBTB7B 51043 2 chr1 + 154970105-154975605 154975105
CHURC1 91612 1 chr14 + 65376078-65381578 65381078
FKBP14 55033 3 chr7 - 30065917-30071417 30066417
CARD9 64170 1 chr9 - 139267633-139273133 139268133
RCC2 55920 2 chr1 - 17764559-17771250 17765059
KCNAB2 8514 2 chr1 + 6047357-6052857 6052357
FAM109B 150368 2 chr22 + 42465254-42470754 42470254
TXN 7295 2 chr9 - 113018420-113023920 113018920
KIT 3815 2 chr4 + 55519094-55524594 55524094
BZRAP1 9256 4 chr17 - 56405652-56411152 56406152
IL11 3589 1 chr19 - 55881331-55886831 55881831
GJB4 127534 2 chr1 + 35220341-35225841 35225341
LRRC47 57470 2 chr1 - 3712568-3718068 3713068
C3orf58 205428 1 chr3 + 143685639-143692666 143692166
PCNXL3 399909 2 chr11 + 65378782-65384282 65383782
MAPKAPK3 7867 1 chr3 + 50644292-50655061 50654561
CHURC1-FNTB 100529261 1 chr14 + 65376078-65381578 65381078
TFCP2 7024 2 chr12 - 51566426-51571926 51566926
PTER 9317 2 chr10 + 16473941-16479441 16478941
ADAR 103 1 chr1 - 154599956-154605456 154600456
HSPA9 3313 2 chr5 - 137910818-137916318 137911318
SFT2D2 375035 2 chr1 + 168190254-168195754 168195254
~ 100861540 2 chr7 - 99332319-99337819 99332819
GIP 2695 1 chr17 - 47045455-47050955 47045955
HYAL2 8692 1 chr3 - 50359781-50365281 50360281
OR10W1 81341 1 chr11 - 58035232-58040732 58035732
PLEKHA8 84725 3 chr7 + 30062976-30068476 30067976
SH3YL1 26751 1 chr2 - 263568-269068 264068
PSRC1 84722 2 chr1 - 109825290-109830790 109825790
ESCO1 114799 2 chr18 - 19180193-19185693 19180693
HIST1H2AE 3012 1 chr6 + 26212147-26217647 26217147
SLC25A5 292 2 chrX + 118597362-118602862 118602362
MYL12B 103910 1 chr18 + 3257110-3263216 3262716
MAP3K11 4296 2 chr11 - 65381220-65386720 65381720
PRR14L 253143 1 chr22 - 32145620-32151120 32146120
MT1A 4489 2 chr16 + 56667577-56673077 56672577
VPS26A 9559 2 chr10 + 70878907-70884407 70883907
HSD11B2 3291 1 chr16 + 67460035-67465535 67465035
WDR87 83889 1 chr19 - 38396817-38402317 38397317
GDPGP1 390637 2 chr15 + 90772486-90777986 90777486
RANBP17 64901 2 chr5 + 170283895-170289395 170288895
LEFTY1 10637 1 chr1 - 226076346-226081846 226076846
PTGER1 5731 2 chr19 - 14585674-14591174 14586174
RELA 5970 2 chr11 - 65429943-65435443 65430443
MRPL50 54534 2 chr9 - 104160419-104165919 104160919
FMO4 2329 2 chr1 + 171278485-171283985 171283485
SALL1 6299 2 chr16 - 51184008-51190183 51184508
C4orf6 10141 2 chr4 + 5521882-5527382 5526882
RAD18 56852 2 chr3 - 9004659-9010159 9005159
SPATA6 54558 1 chr1 - 48937376-48942876 48937876
SFXN5 94097 2 chr2 - 73298465-73303965 73298965
NXNL2 158046 1 chr9 + 91145015-91150515 91150015
ATP13A3 79572 2 chr3 - 194188468-194193968 194188968
P4HA1 5033 2 chr10 - 74856232-74861732 74856732
NAPB 63908 2 chr20 - 23401656-23407156 23402156
EMC2 9694 1 chr8 + 109450852-109456352 109455852
PPM1H 57460 2 chr12 - 63328165-63333665 63328665
TRRAP 8295 2 chr7 + 98471112-98476612 98476112
PRAM1 84106 1 chr19 - 8567038-8572538 8567538
CALM3 801 1 chr14 + 90858326-90863826 90863326
ZC3H11A 9877 2 chr1 + 203759750-203765250 203764750
KDM4C 23081 1 chr9 + 6715862-6721362 6720862
RPL34 6164 1 chr4 + 109536721-109542248 109541748
ALDH5A1 7915 1 chr6 + 24490196-24495696 24495196
ANKRD28 23243 2 chr3 - 15900553-15906053 15901053
DNAJB1 3337 1 chr19 - 14628701-14634201 14629201
RUVBL2 10856 2 chr19 + 49492155-49497655 49497155
FAM89B 23625 1 chr11 + 65334819-65340319 65339819
GRB10 2887 2 chr7 - 50860659-50866159 50861159
NEFM 4741 2 chr8 + 24766273-24772954 24772454
IFNGR1 3459 2 chr6 - 137540067-137545567 137540567
UPF3A 65110 2 chr13 + 115042058-115047558 115047058
CEP95 90799 2 chr17 + 62498157-62503657 62503157
STC2 8614 2 chr5 - 172756006-172761506 172756506
GAPVD1 26130 2 chr9 + 128019110-128024610 128024110
PMPCB 9512 2 chr7 + 102932872-102938372 102937872
CDKN2D 1032 2 chr19 - 10679131-10684655 10679631
MARCKSL1 65108 1 chr1 - 32801340-32806840 32801840
TAS2R5 54429 2 chr7 + 141485016-141490516 141490016
RAB1A 5861 2 chr2 - 65356935-65362435 65357435
MSRB1 51734 1 chr16 - 1992794-1998294 1993294
B4GALT1 2683 1 chr9 - 33166856-33172356 33167356
RPL13A 23521 1 chr19 + 49985810-49991310 49990810
FMNL1 752 2 chr17 + 43294291-43299791 43299291
TMEM86B 255043 1 chr19 - 55740132-55745632 55740632
CPSF1 29894 1 chr8 - 145634233-145639733 145634733
FAM92A1 137392 2 chr8 + 94707772-94713272 94712772
TGFBR3L 100507588 2 chr19 + 7976031-7981531 7981031
ETFB 2109 1 chr19 - 51869172-51874672 51869672
~ 200373 1 chr2 + 120297007-120302507 120302007
DEPDC5 9681 1 chr22 + 32144936-32151347 32150847
BRI3 25798 2 chr7 + 97905978-97911478 97910978
TUSC2 11334 1 chr3 - 50365168-50370668 50365668
SRGN 5552 2 chr10 + 70842827-70848327 70847827
C3orf67 200844 2 chr3 - 59035215-59040715 59035715
JUN 3725 2 chr1 - 59249285-59254785 59249785
JUNB 3726 2 chr19 + 12897309-12902809 12902309
SNAPC2 6618 2 chr19 + 7980193-7985693 7985193
FN1 2335 1 chr2 - 216300291-216305791 216300791
SIPA1L3 23094 1 chr19 + 38392867-38398367 38397867
HEMK1 51409 2 chr3 + 50601908-50607408 50606908
SCAF1 58506 2 chr19 + 50140381-50145881 50145381
SIRT6 51548 2 chr19 - 4182096-4187596 4182596
KIAA1737 85457 2 chr14 + 77559577-77565077 77564577
PLD6 201164 2 chr17 - 17109146-17114646 17109646
RAPGEF1 2889 1 chr9 - 134612425-134617925 134612925
SNED1 25992 2 chr2 + 241933254-241938754 241938254
MOGAT3 346606 2 chr7 - 100843802-100849302 100844302
TPD52L1 7164 2 chr6 + 125469878-125475919 125475419
ATP6V0E1 8992 1 chr5 + 172405762-172411262 172410762
LGALS8 3964 2 chr1 + 236676513-236687526 236687026
EIF4ENIF1 56478 1 chr22 - 31885047-31890874 31885547
RCBTB2 1102 1 chr13 - 49106816-49112316 49107316
TPM4 7171 1 chr19 + 16173316-16178816 16178316
C9orf89 84270 1 chr9 + 95853449-95858949 95858449
POLDIP3 84271 1 chr22 - 43010462-43015962 43010962
SLMO2 51012 2 chr20 - 57617401-57622901 57617901
RPL22 6146 2 chr1 - 6259179-6264679 6259679
SIX1 6495 1 chr14 - 61115655-61121155 61116155
SIPA1 6494 2 chr11 + 65400577-65408091 65407591
ARHGEF25 115557 2 chr12 + 57998962-58005717 58005217
DACH1 1602 2 chr13 - 72440830-72446330 72441330
GSDMD 79792 2 chr8 + 144630556-144640976 144640476
SKIDA1 387640 1 chr10 - 21814111-21819611 21814611
TRAPPC6A 79090 1 chr19 - 45681001-45686501 45681501
ZNF675 171392 2 chr19 - 23869517-23875017 23870017
CLN3 1201 2 chr16 - 28502903-28508623 28503403
RRAS 6237 2 chr19 - 50142900-50148400 50143400
PIK3IP1 113791 1 chr22 - 31688020-31693520 31688520
PCNP 57092 2 chr3 + 101288041-101293541 101293041
ZNF765 91661 2 chr19 + 53893396-53898896 53898396
KCNJ4 3761 2 chr22 - 38850705-38856205 38851205
TBX1 6899 2 chr22 + 19739225-19744725 19744225
ZNF79 7633 2 chr9 + 130181652-130187152 130186652
DTX4 23220 2 chr11 + 58934811-58940311 58939811
SNRNP70 6625 1 chr19 + 49583464-49588964 49588464
TAGLN2 8407 2 chr1 - 159894784-159900284 159895284
ARRDC2 27106 2 chr19 + 18106943-18112443 18111943
TRIOBP 11078 2 chr22 + 38087994-38093494 38092994
NDUFA2 4695 2 chr5 - 140026870-140032370 140027370
NUCB2 4925 1 chr11 + 17293285-17298785 17298285
EXT1 2131 2 chr8 - 119123558-119129058 119124058
SFI1 9814 1 chr22 + 31887124-31892624 31892124
CTDSP1 58190 2 chr2 + 219258060-219264977 219264477
MTHFD2L 441024 2 chr4 + 75018828-75024328 75023828
ZFPM1 161882 2 chr16 + 88515013-88520513 88520013
CHD3 1107 2 chr17 + 7783122-7792668 7792168
EPB41L1 2036 2 chr20 + 34674425-34681131 34680631
NES 10763 2 chr1 - 156646689-156652189 156647189
C17orf58 284018 2 chr17 - 65989265-65994765 65989765
MUT 4594 2 chr6 - 49430541-49436041 49431041
LIF 3976 2 chr22 - 30642340-30647840 30642840
DNAAF2 55172 1 chr14 - 50101448-50106948 50101948
APEX1 328 2 chr14 + 20918289-20923789 20923289
FZD4 8322 2 chr11 - 86665940-86671440 86666440
CCDC57 284001 1 chr17 - 80170189-80175689 80170689
BLOC1S3 388552 1 chr19 + 45677002-45682502 45682002
PYROXD2 84795 2 chr10 - 100174478-100179978 100174978
CCDC71L 168455 2 chr7 - 106301134-106306634 106301634
METRN 79006 2 chr16 + 760172-765672 765172
CCND2 894 2 chr12 + 4377901-4383401 4382901
RNASE7 84659 2 chr14 + 21505384-21510884 21510384
CCND3 896 2 chr6 - 42016110-42021610 42016610
ZNF391 346157 2 chr6 + 27351523-27357023 27356523
TSSC4 10078 2 chr11 + 2418522-2424022 2423522
GPX4 2879 2 chr19 + 1098935-1105148 1104648
CMYA5 202333 1 chr5 + 78980658-78986158 78985658
NEDD4L 23327 2 chr18 + 55706609-55714957 55714457
CSRNP1 64651 2 chr3 - 39194602-39200102 39195102
SYT15 83849 2 chr10 - 46970101-46975601 46970601
PTTG1IP 754 2 chr21 - 46293318-46298818 46293818
CLEC10A 10462 2 chr17 - 6983100-6988600 6983600
DERL3 91319 1 chr22 - 24180699-24186199 24181199
SPAG9 9043 2 chr17 - 49197726-49203226 49198226
CEBPG 1054 2 chr19 + 33859574-33865929 33865429
NPHP4 261734 2 chr1 - 6052033-6057533 6052533
NEK6 10783 1 chr9 + 127014884-127021029 127020529
CLIP2 7461 1 chr7 + 73698804-73704304 73703804
MXRA8 54587 2 chr1 - 1293415-1298915 1293915
SNX22 79856 2 chr15 + 64438915-64444415 64443915
ILVBL 10994 2 chr19 - 15236077-15241577 15236577
CENPQ 55166 2 chr6 + 49426095-49431595 49431095
NAGA 4668 2 chr22 - 42466346-42471846 42466846
IMMT 10989 2 chr2 - 86422393-86427893 86422893
WIZ 58525 2 chr19 - 15560262-15565762 15560762
FILIP1L 11259 2 chr3 - 99832849-99838349 99833349
ACPL2 92370 2 chr3 + 140945681-140951181 140950681
C19orf77 284422 2 chr19 - 3480040-3485540 3480540
ADAMTS14 140766 2 chr10 + 72427558-72433058 72432558
EIF4A2 1974 1 chr3 + 186496360-186501860 186501360
DAG1 1605 2 chr3 + 49501135-49508064 49507564
LIMD1 8994 2 chr3 + 45631322-45636822 45636322
ZNF189 7743 2 chr9 + 104156162-104161662 104161162
ELF4 2000 2 chrX - 129243975-129249688 129244475
MRPL35 51318 2 chr2 + 86421555-86427055 86426555
TRNT1 51095 1 chr3 + 3163599-3169099 3168599
BCL10 8915 2 chr1 - 85742087-85747587 85742587
C16orf74 404550 2 chr16 - 85784189-85789689 85784689
NR2C1 7181 4 chr12 - 95466904-95472404 95467404
NR2C2 7182 2 chr3 + 14984235-14989735 14989235
FGFBP3 143282 2 chr10 - 93668758-93674258 93669258
THADA 63892 2 chr2 - 43822613-43828185 43823113
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