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LIN9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 286826 lin-9 homolog (C. elegans) chr1 - 226496704 - 226502449 226497204 Transcription Factor Binding Sites   Download all TFBS in the LIN9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX - 226495943 226495957 3.0E-06 ACCAATTCCATAGTT 15 MYBL2_MYB_DBD_dimeric_15_1 SELEX + 226497874 226497888 7.0E-06 GACCGTTAAGCAGTC 15 SOX4_HMG_DBD_dimeric_16_1 SELEX - 226495943 226495958 8.0E-06 CACCAATTCCATAGTT 16 Tp53_p53l_DBD_dimeric_18_1 SELEX + 226495975 226495992 1.0E-06 ACAAGTGAGCATACATGT 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 226497501 226497518 4.0E-06 GAGACCTTGAGAGGTCAT 18 SRY_HMG_DBD_dimeric_15_1 SELEX - 226495943 226495957 4.0E-06 ACCAATTCCATAGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX - 226495942 226495958 3.0E-06 CACCAATTCCATAGTTT 17 FOXF2_MA0030.1 JASPAR - 226494944 226494957 5.0E-06 TTATCATAAACATG 14 SRY_HMG_DBD_dimeric_13_2 SELEX + 226494973 226494985 6.0E-06 TGAAAAACATTTT 13 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX + 226497511 226497524 9.0E-06 GAGGTCATGAAGTT 14 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX - 226497511 226497524 9.0E-06 AACTTCATGACCTC 14 EBF1_EBF_full_dimeric_14_1 SELEX - 226496207 226496220 8.0E-06 CTTCCCCTGGGACC 14 TEF_bZIP_DBD_dimeric_12_1 SELEX + 226496414 226496425 2.0E-06 AGTTACATAACC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 226496414 226496425 9.0E-06 GGTTATGTAACT 12 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 226496280 226496296 7.0E-06 GAGGACAGTGAAGATCA 17 HLF_bZIP_full_dimeric_12_1 SELEX + 226496414 226496425 2.0E-06 AGTTACATAACC 12 EWSR1-FLI1_MA0149.1 JASPAR + 226497075 226497092 6.0E-06 GGGCGGGAGGAAGGGAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 226497079 226497096 0.0E+00 GGGAGGAAGGGAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 226497083 226497100 0.0E+00 GGAAGGGAGGAAGGAGGC 18 NFIL3_MA0025.1 JASPAR - 226496413 226496423 3.0E-06 TTATGTAACTC 11 STAT1_MA0137.2 JASPAR - 226497905 226497919 7.0E-06 TAGTTCCTGGAATTC 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 226495943 226495957 4.0E-06 ACCAATTCCATAGTT 15 SOX15_HMG_full_dimeric_15_3 SELEX + 226494972 226494986 8.0E-06 ATGAAAAACATTTTC 15 DBP_bZIP_full_dimeric_12_1 SELEX + 226496414 226496425 5.0E-06 AGTTACATAACC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 226496414 226496425 6.0E-06 GGTTATGTAACT 12 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 226494855 226494863 5.0E-06 GCCACTTAA 9 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 226498686 226498700 5.0E-06 TTTAATCTTCTTAGG 15 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 226501931 226501944 3.0E-06 ATCATTATCATTGG 14 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 226498770 226498787 1.0E-06 GAGATCAAGAAAAGGTCA 18 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 226494855 226494863 8.0E-06 GCCACTTAA 9 MYBL2_MYB_DBD_monomeric_11_1 SELEX + 226497872 226497882 1.0E-05 GAGACCGTTAA 11 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 226496280 226496296 0.0E+00 GAGGACAGTGAAGATCA 17 ZNF740_C2H2_full_monomeric_10_1 SELEX - 226496267 226496276 5.0E-06 ACCCCCCCAC 10 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 226498771 226498787 0.0E+00 AGATCAAGAAAAGGTCA 17 RXRG_nuclearreceptor_DBD_dimeric_14_2 SELEX + 226497511 226497524 1.0E-05 GAGGTCATGAAGTT 14 RXRG_nuclearreceptor_DBD_dimeric_14_2 SELEX - 226497511 226497524 7.0E-06 AACTTCATGACCTC 14 SP1_MA0079.2 JASPAR - 226492405 226492414 9.0E-06 CCCCTCCTCC 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 226498771 226498787 1.0E-06 AGATCAAGAAAAGGTCA 17 SOX18_HMG_full_dimeric_15_1 SELEX - 226495943 226495957 4.0E-06 ACCAATTCCATAGTT 15 NFATC1_NFAT_full_dimeric_20_1 SELEX - 226495916 226495935 9.0E-06 AATGGAACTTAATTTTGTAA 20 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 226497904 226497920 7.0E-06 TGAATTCCAGGAACTAC 17 SOX15_HMG_full_dimeric_15_1 SELEX - 226495943 226495957 8.0E-06 ACCAATTCCATAGTT 15 YY2_C2H2_full_monomeric_11_1 SELEX + 226496833 226496843 2.0E-06 TCCGCCATCTT 11 SOX7_HMG_full_dimeric_17_1 SELEX - 226495942 226495958 6.0E-06 CACCAATTCCATAGTTT 17 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 226495743 226495763 1.0E-05 AAAATGAGGACTCAACATACT 21 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 226496414 226496425 2.0E-06 AGTTACATAACC 12 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 226496881 226496896 5.0E-06 GCCCCACAATGCACCG 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 226494863 226494879 6.0E-06 AAATGCCTCTCATTACA 17 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 226494855 226494864 7.0E-06 GCCACTTAAA 10 Foxd3_MA0041.1 JASPAR - 226494823 226494834 3.0E-06 GAATATTTGCTT 12 Nkx3-2_MA0122.1 JASPAR - 226494855 226494863 8.0E-06 TTAAGTGGC 9 MAFG_bZIP_full_dimeric_21_1 SELEX + 226495743 226495763 1.0E-05 AGTATGTTGAGTCCTCATTTT 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 226495743 226495763 8.0E-06 AAAATGAGGACTCAACATACT 21 TBX21_TBX_full_dimeric_19_1 SELEX + 226494922 226494940 4.0E-06 TGACATCCAAGAGGTGATA 19 FOXI1_forkhead_full_dimeric_17_1 SELEX + 226494945 226494961 3.0E-06 ATGTTTATGATAAAGAT 17 MYBL1_MYB_DBD_monomeric_11_1 SELEX + 226497872 226497882 8.0E-06 GAGACCGTTAA 11 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 226498768 226498787 1.0E-06 ATGAGATCAAGAAAAGGTCA 20 Sox11_HMG_DBD_dimeric_15_1 SELEX - 226495943 226495957 3.0E-06 ACCAATTCCATAGTT 15 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 226494855 226494865 7.0E-06 GCCACTTAAAA 11 ETS1_ETS_full_dimeric_18_1 SELEX + 226496236 226496253 8.0E-06 CACGGAAACACTTCCAGG 18 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 226496267 226496276 2.0E-06 ACCCCCCCAC 10 FOXC1_MA0032.1 JASPAR - 226495963 226495970 7.0E-06 AGTAAGTA 8 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 226498518 226498535 1.0E-06 ATTGCTGATGCCAGCTCT 18 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 226498518 226498535 8.0E-06 AGAGCTGGCATCAGCAAT 18 Sox3_HMG_DBD_dimeric_17_1 SELEX + 226495942 226495958 4.0E-06 AAACTATGGAATTGGTG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 226495942 226495958 4.0E-06 CACCAATTCCATAGTTT 17 Sox2_MA0143.1 JASPAR - 226496630 226496644 4.0E-06 CCTTTGTTATGGTGT 15 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX + 226497511 226497524 9.0E-06 GAGGTCATGAAGTT 14 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX - 226497511 226497524 1.0E-05 AACTTCATGACCTC 14 V_OSR1_03_M02784 TRANSFAC + 226494899 226494914 0.0E+00 CAAAACAGTAGCTCTA 16 RXR_RAR_DR5_MA0159.1 JASPAR + 226498771 226498787 0.0E+00 AGATCAAGAAAAGGTCA 17 V_AP2ALPHA_Q6_M01857 TRANSFAC + 226497059 226497069 3.0E-06 CGCCTCCGGCC 11 V_FREAC7_01_M00293 TRANSFAC - 226494942 226494957 3.0E-06 TTATCATAAACATGTC 16 V_GEN_INI_B_M00315 TRANSFAC + 226495755 226495762 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC - 226496632 226496644 3.0E-06 CCTTTGTTATGGT 13 V_EBF_Q6_M00977 TRANSFAC - 226496209 226496219 2.0E-06 TTCCCCTGGGA 11 V_GATA1_Q6_M02004 TRANSFAC + 226494947 226494961 4.0E-06 GTTTATGATAAAGAT 15 V_XFD1_01_M00267 TRANSFAC - 226494942 226494955 1.0E-05 ATCATAAACATGTC 14 V_NRSF_Q4_M01028 TRANSFAC - 226497199 226497217 6.0E-06 CTGCAGTTCCCGCAGCTGC 19 V_BCL6B_03_M02740 TRANSFAC + 226497840 226497855 5.0E-06 TTTCTCCAGGAATTTA 16 V_EVI1_04_M00081 TRANSFAC + 226494936 226494950 6.0E-06 TGATAAGACATGTTT 15 V_EVI1_04_M00081 TRANSFAC + 226496322 226496336 1.0E-05 TGACAGGACAAGATC 15 V_FOXD3_01_M00130 TRANSFAC - 226494823 226494834 3.0E-06 GAATATTTGCTT 12 V_SATB1_Q3_M01723 TRANSFAC + 226494831 226494846 3.0E-06 ATTCCTAATGGCAGTT 16 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 226494839 226494852 4.0E-06 TGGCAGTTGTAAGA 14 V_NFAT3_Q3_M01734 TRANSFAC - 226498467 226498476 1.0E-05 TTATTTTCCA 10 V_YY1_Q6_M00793 TRANSFAC + 226496836 226496844 7.0E-06 GCCATCTTG 9 V_STAT5B_01_M00459 TRANSFAC + 226497905 226497919 2.0E-06 GAATTCCAGGAACTA 15 V_STAT5B_01_M00459 TRANSFAC - 226497905 226497919 1.0E-06 TAGTTCCTGGAATTC 15 V_SP1_03_M02281 TRANSFAC - 226492405 226492414 9.0E-06 CCCCTCCTCC 10 V_GATA_C_M00203 TRANSFAC + 226494936 226494946 5.0E-06 TGATAAGACAT 11 V_NKX24_01_M01350 TRANSFAC + 226494852 226494867 0.0E+00 AAAGCCACTTAAAATG 16 V_SP1_02_M01303 TRANSFAC + 226496272 226496282 5.0E-06 GGGGTGGGGAG 11 V_HTF_01_M00538 TRANSFAC - 226498454 226498477 9.0E-06 TTTATTTTCCACGTCTTGAAAGGT 24 V_AP4_Q6_01_M00927 TRANSFAC + 226495053 226495061 6.0E-06 ACCAGCTGC 9 V_NFAT2_01_M01748 TRANSFAC + 226498466 226498474 8.0E-06 GTGGAAAAT 9 V_P53_02_M00272 TRANSFAC + 226494941 226494950 2.0E-06 AGACATGTTT 10 V_P53_02_M00272 TRANSFAC - 226494941 226494950 9.0E-06 AAACATGTCT 10 V_PAX_Q6_M00808 TRANSFAC - 226497903 226497913 5.0E-06 CTGGAATTCAC 11 V_GEN_INI3_B_M00314 TRANSFAC + 226495755 226495762 1.0E-05 CCTCATTT 8 V_DBP_Q6_01_M01872 TRANSFAC - 226496416 226496423 5.0E-06 TTATGTAA 8 V_HOXB13_01_M01467 TRANSFAC + 226494755 226494770 7.0E-06 ACCCTAATATAAATCC 16 V_HNF3G_Q4_M02015 TRANSFAC + 226497220 226497227 7.0E-06 TGTTTGTT 8 V_E4BP4_01_M00045 TRANSFAC - 226496414 226496425 3.0E-06 GGTTATGTAACT 12 V_GATA3_05_M02859 TRANSFAC + 226498760 226498781 1.0E-06 ATTTGGAGATGAGATCAAGAAA 22 V_GATA3_05_M02859 TRANSFAC - 226498761 226498782 0.0E+00 TTTTCTTGATCTCATCTCCAAA 22 V_STAF_01_M00262 TRANSFAC - 226496877 226496898 2.0E-06 CCGCCCCACAATGCACCGCGGC 22 V_NKX31_02_M02782 TRANSFAC + 226494851 226494867 3.0E-06 GAAAGCCACTTAAAATG 17 V_NKX26_01_M01322 TRANSFAC + 226494852 226494867 0.0E+00 AAAGCCACTTAAAATG 16 V_STAT1_01_M00224 TRANSFAC - 226497323 226497343 5.0E-06 CGTGGGTTTCGGGAACTGTGA 21 V_OLF1_01_M00261 TRANSFAC + 226496203 226496224 9.0E-06 CTGTGGTCCCAGGGGAAGGGGC 22 V_EVI1_01_M00078 TRANSFAC + 226494936 226494951 8.0E-06 TGATAAGACATGTTTA 16 V_EVI1_01_M00078 TRANSFAC + 226496322 226496337 0.0E+00 TGACAGGACAAGATCA 16 V_MAZ_Q6_01_M02023 TRANSFAC + 226496271 226496284 0.0E+00 GGGGGTGGGGAGGA 14 V_NKX22_02_M01372 TRANSFAC + 226494852 226494868 1.0E-06 AAAGCCACTTAAAATGC 17 V_SZF11_01_M01109 TRANSFAC + 226496531 226496545 8.0E-06 CCAGGGGAGCAGCCA 15 V_YY1_Q6_02_M01035 TRANSFAC + 226496833 226496843 7.0E-06 TCCGCCATCTT 11 V_OCT1_04_M00138 TRANSFAC + 226494943 226494965 1.0E-06 ACATGTTTATGATAAAGATACCA 23 V_REX1_03_M01744 TRANSFAC - 226496832 226496843 6.0E-06 AAGATGGCGGAG 12 V_ZBRK1_01_M01105 TRANSFAC - 226496865 226496879 8.0E-06 GGCGGGCAGCCTTTG 15 V_RREB1_01_M00257 TRANSFAC - 226496267 226496280 5.0E-06 CCCCACCCCCCCAC 14 V_IRX5_01_M01472 TRANSFAC + 226494938 226494954 6.0E-06 ATAAGACATGTTTATGA 17 V_IRX5_01_M01472 TRANSFAC + 226495982 226495998 1.0E-05 AGCATACATGTCTTAGA 17 V_NKX32_02_M01482 TRANSFAC + 226494851 226494867 4.0E-06 GAAAGCCACTTAAAATG 17 V_YY1_03_M02044 TRANSFAC + 226496833 226496844 2.0E-06 TCCGCCATCTTG 12 V_POU6F1_02_M01462 TRANSFAC - 226501926 226501942 1.0E-06 AATGATAATGATCTTGA 17 V_NKX25_03_M01414 TRANSFAC + 226494852 226494867 0.0E+00 AAAGCCACTTAAAATG 16 V_GATA1_04_M00128 TRANSFAC + 226494949 226494961 7.0E-06 TTATGATAAAGAT 13 V_FOXJ3_06_M02855 TRANSFAC + 226496629 226496645 0.0E+00 GACACCATAACAAAGGC 17 V_GEN_INI2_B_M00313 TRANSFAC + 226495755 226495762 1.0E-05 CCTCATTT 8 V_MEIS1_01_M00419 TRANSFAC + 226496319 226496330 4.0E-06 CTGTGACAGGAC 12 V_TCF7_04_M02921 TRANSFAC - 226494945 226494959 8.0E-06 CTTTATCATAAACAT 15 V_FPM315_01_M01587 TRANSFAC + 226492402 226492413 4.0E-06 AAGGGAGGAGGG 12 V_OSR2_03_M02785 TRANSFAC + 226494899 226494914 1.0E-06 CAAAACAGTAGCTCTA 16 V_TCF4_Q5_M00671 TRANSFAC - 226496863 226496870 1.0E-05 CCTTTGAA 8 V_T3RBETA_Q6_01_M02119 TRANSFAC + 226496271 226496287 4.0E-06 GGGGGTGGGGAGGACAG 17 V_ZFP281_01_M01597 TRANSFAC + 226496270 226496280 4.0E-06 GGGGGGTGGGG 11 V_R_01_M00273 TRANSFAC - 226496503 226496523 6.0E-06 CCGGCCCCCAGCCGAGGTGGA 21 V_IRX2_01_M01405 TRANSFAC + 226494938 226494954 9.0E-06 ATAAGACATGTTTATGA 17 V_LEF1TCF1_Q4_M00978 TRANSFAC - 226497915 226497925 5.0E-06 ACTTTGTAGTT 11 V_RXR_RAR_01_M02272 TRANSFAC + 226498771 226498787 0.0E+00 AGATCAAGAAAAGGTCA 17 V_STAT5A_01_M00457 TRANSFAC + 226497905 226497919 0.0E+00 GAATTCCAGGAACTA 15 V_STAT5A_01_M00457 TRANSFAC - 226497905 226497919 1.0E-06 TAGTTCCTGGAATTC 15 V_SOX2_01_M02246 TRANSFAC - 226496630 226496644 4.0E-06 CCTTTGTTATGGTGT 15 V_ZFP281_04_M02831 TRANSFAC - 226496267 226496281 0.0E+00 TCCCCACCCCCCCAC 15 V_NUR77_Q5_M01217 TRANSFAC - 226498779 226498788 9.0E-06 CTGACCTTTT 10 V_POU6F1_03_M01479 TRANSFAC - 226501926 226501942 2.0E-06 AATGATAATGATCTTGA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 226497075 226497092 6.0E-06 GGGCGGGAGGAAGGGAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 226497079 226497096 0.0E+00 GGGAGGAAGGGAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 226497083 226497100 0.0E+00 GGAAGGGAGGAAGGAGGC 18 V_FOXJ2_01_M00422 TRANSFAC + 226494819 226494836 7.0E-06 TATGAAGCAAATATTCCT 18 V_SOX4_01_M01308 TRANSFAC + 226496637 226496644 1.0E-05 AACAAAGG 8 V_HLF_01_M00260 TRANSFAC + 226496415 226496424 7.0E-06 GTTACATAAC 10 V_SOX2_Q6_M01272 TRANSFAC - 226496633 226496648 3.0E-06 GCCGCCTTTGTTATGG 16 V_DR3_Q4_M00966 TRANSFAC - 226497508 226497528 3.0E-06 GACCAACTTCATGACCTCTCA 21 V_UF1H3BETA_Q6_M01068 TRANSFAC - 226497046 226497059 2.0E-06 GGCGGCGGAGGGGC 14 V_SOX5_04_M02910 TRANSFAC + 226495916 226495930 2.0E-06 TTACAAAATTAAGTT 15 V_TCF3_05_M02920 TRANSFAC + 226494755 226494769 3.0E-06 ACCCTAATATAAATC 15 V_BRCA_01_M01082 TRANSFAC - 226494878 226494885 1.0E-05 TTCTGTTG 8 V_STAT1_05_M01260 TRANSFAC + 226497905 226497926 4.0E-06 GAATTCCAGGAACTACAAAGTT 22 V_SMAD_Q6_M00792 TRANSFAC + 226496628 226496636 3.0E-06 AGACACCAT 9 V_MIF1_01_M00279 TRANSFAC + 226496188 226496205 3.0E-06 AAGGTCCACAGCCACCTG 18 V_SMAD1_01_M01590 TRANSFAC + 226496634 226496645 1.0E-06 CATAACAAAGGC 12 V_NKX21_01_M01312 TRANSFAC + 226494852 226494867 1.0E-06 AAAGCCACTTAAAATG 16

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