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TBX1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
6899 T-box 1 chr22 +19739225 - 19744725 19744225 TBX1_TBX_DBD_dimeric_20_1
TBX1_TBX_DBD_dimeric_23_1
TBX1_TBX_DBD_dimeric_19_1
TBX1_TBX_DBD_dimeric_20_2

Transcription Factor Binding Sites

 
Download all TFBS in the TBX1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RXRG_nuclearreceptor_full_dimeric_14_2 SELEX - 19748361 19748374 4.0E-06 GAGATCATGACCCG 14
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 19747755 19747767 1.0E-06 AAAAACATAAAAA 13
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 19747825 19747836 4.0E-06 ATTAAAAATAAA 12
RXRA_nuclearreceptor_full_dimeric_14_2 SELEX - 19748361 19748374 5.0E-06 GAGATCATGACCCG 14
Rxra_nuclearreceptor_DBD_dimeric_12_1 SELEX + 19748362 19748373 6.0E-06 GGGTCATGATCT 12
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 19747825 19747836 3.0E-06 ATTAAAAATAAA 12
MEF2A_MA0052.1 JASPAR - 19747826 19747835 7.0E-06 TTATTTTTAA 10
POU3F3_POU_DBD_dimeric_12_1 SELEX + 19747822 19747833 9.0E-06 ATGATTAAAAAT 12
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 19747755 19747767 8.0E-06 AAAAACATAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 19747749 19747761 5.0E-06 AAAAAGAAAAACA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 19747755 19747767 0.0E+00 AAAAACATAAAAA 13
RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX + 19748361 19748374 6.0E-06 CGGGTCATGATCTC 14
RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX - 19748361 19748374 7.0E-06 GAGATCATGACCCG 14
V_FOXP1_01_M00987 TRANSFAC - 19747749 19747768 0.0E+00 TTTTTTATGTTTTTCTTTTT 20
V_FOXP1_01_M00987 TRANSFAC - 19747752 19747771 2.0E-06 TTGTTTTTTATGTTTTTCTT 20
V_FOXP1_01_M00987 TRANSFAC - 19747763 19747782 6.0E-06 TTGTATGTCCTTTGTTTTTT 20
V_AP2ALPHA_Q6_M01857 TRANSFAC + 19746188 19746198 6.0E-06 CGCCCCCGGCC 11
V_TCF3_01_M01594 TRANSFAC - 19747762 19747774 0.0E+00 CCTTTGTTTTTTA 13
V_TCF3_01_M01594 TRANSFAC - 19747809 19747821 7.0E-06 TCTTTGTCTTTCT 13
V_CEBP_Q3_M00770 TRANSFAC + 19747976 19747987 8.0E-06 AAATTAGGAAAA 12
V_HMGIY_Q3_M01010 TRANSFAC - 19745399 19745413 2.0E-06 AGTGCATTTTTCTTG 15
V_BCL6_01_M01183 TRANSFAC - 19747751 19747766 0.0E+00 TTTTATGTTTTTCTTT 16
V_BCL6_01_M01183 TRANSFAC - 19747817 19747832 1.0E-06 TTTTTAATCATTCTTT 16
V_MMEF2_Q6_M00405 TRANSFAC - 19747739 19747754 1.0E-06 CTTTTTAAAAAAAAAA 16
V_POU1F1_Q6_M00744 TRANSFAC + 19747822 19747831 8.0E-06 ATGATTAAAA 10
V_FOXO3A_Q1_M01137 TRANSFAC + 19747827 19747838 8.0E-06 TAAAAATAAAGT 12
V_EAR2_Q2_M01728 TRANSFAC - 19747764 19747777 5.0E-06 TGTCCTTTGTTTTT 14
V_HNF3_Q6_01_M01012 TRANSFAC - 19747749 19747766 3.0E-06 TTTTATGTTTTTCTTTTT 18
V_AP4_Q6_02_M01860 TRANSFAC + 19745452 19745464 4.0E-06 CCAGCTGCAGGCG 13
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 19746246 19746261 4.0E-06 CATCCGGAGGGTGGGC 16
V_PU1_Q4_M01172 TRANSFAC - 19747911 19747929 2.0E-06 TCTTTTTTCTTCCCCTATC 19
V_TCFAP2E_04_M02926 TRANSFAC + 19747758 19747771 8.0E-06 AACATAAAAAACAA 14
V_CDX_Q5_M00991 TRANSFAC + 19747748 19747765 4.0E-06 TAAAAAGAAAAACATAAA 18
V_PAX7_01_M01339 TRANSFAC + 19747971 19747987 7.0E-06 ATAACAAATTAGGAAAA 17
V_MEF2A_Q6_M02024 TRANSFAC - 19747825 19747834 4.0E-06 TATTTTTAAT 10
V_WT1_Q6_01_M02036 TRANSFAC - 19748337 19748346 4.0E-06 CGCCCCCGCC 10
V_ELF4_04_M02850 TRANSFAC - 19747738 19747754 3.0E-06 CTTTTTAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC + 19747824 19747840 5.0E-06 GATTAAAAATAAAGTGA 17
V_TST1_01_M00133 TRANSFAC + 19747821 19747835 4.0E-06 AATGATTAAAAATAA 15
V_SOX7_03_M02807 TRANSFAC + 19747760 19747781 0.0E+00 CATAAAAAACAAAGGACATACA 22
V_HELIOSA_02_M01004 TRANSFAC + 19747978 19747988 5.0E-06 ATTAGGAAAAG 11
V_FOXA2_02_M02853 TRANSFAC + 19747761 19747775 3.0E-06 ATAAAAAACAAAGGA 15
V_ZFP105_03_M02827 TRANSFAC + 19747760 19747774 2.0E-06 CATAAAAAACAAAGG 15
V_ZFP105_03_M02827 TRANSFAC + 19747821 19747835 6.0E-06 AATGATTAAAAATAA 15
V_HNF1_Q6_M00790 TRANSFAC - 19747815 19747832 6.0E-06 TTTTTAATCATTCTTTGT 18
V_TEF_Q6_M00672 TRANSFAC + 19747777 19747788 7.0E-06 ATACAAAAATAA 12
V_KROX_Q6_M00982 TRANSFAC - 19744418 19744431 1.0E-06 CCCGCCCACACTCC 14
V_KROX_Q6_M00982 TRANSFAC - 19748335 19748348 2.0E-06 GCCGCCCCCGCCAC 14
V_AMEF2_Q6_M00403 TRANSFAC - 19747737 19747754 7.0E-06 CTTTTTAAAAAAAAAAAA 18
V_SP1_Q6_M00196 TRANSFAC - 19746183 19746195 9.0E-06 CGGGGGCGGAGCC 13
V_AP2BETA_Q3_M01858 TRANSFAC + 19748350 19748365 9.0E-06 GCGGCGGCCCGCGGGT 16
V_EGR1_Q6_M01873 TRANSFAC + 19748338 19748347 4.0E-06 GCGGGGGCGG 10
V_HNF1_Q6_01_M01011 TRANSFAC + 19747750 19747770 1.0E-05 AAAAGAAAAACATAAAAAACA 21
V_HNF1_Q6_01_M01011 TRANSFAC + 19747821 19747841 2.0E-06 AATGATTAAAAATAAAGTGAA 21
V_REST_01_M01256 TRANSFAC - 19745408 19745429 1.0E-06 AAGGGAAGCTGTCCTTAGTGCA 22
V_SOX12_04_M02900 TRANSFAC + 19747809 19747824 2.0E-06 AGAAAGACAAAGAATG 16
V_MUSCLE_INI_B_M00321 TRANSFAC - 19744430 19744450 4.0E-06 CCGCCCCGCCACCCCGCCACC 21
V_MUSCLE_INI_B_M00321 TRANSFAC - 19746095 19746115 0.0E+00 GCCCCCCGGCACCCAGCAGCC 21
V_ZIC3_05_M02941 TRANSFAC - 19744502 19744516 3.0E-06 TCGCGCAGCAGGATA 15
V_TCF7_03_M02817 TRANSFAC + 19747762 19747778 9.0E-06 TAAAAAACAAAGGACAT 17
V_CDC5_01_M00478 TRANSFAC + 19747824 19747835 3.0E-06 GATTAAAAATAA 12
V_ARID3A_04_M02735 TRANSFAC - 19747738 19747754 7.0E-06 CTTTTTAAAAAAAAAAA 17
V_ARID3A_04_M02735 TRANSFAC + 19747818 19747834 9.0E-06 AAGAATGATTAAAAATA 17
V_TBP_06_M02814 TRANSFAC + 19747740 19747755 1.0E-06 TTTTTTTTTAAAAAGA 16
V_TBP_06_M02814 TRANSFAC - 19747740 19747755 1.0E-06 TCTTTTTAAAAAAAAA 16
V_TBP_06_M02814 TRANSFAC - 19747742 19747757 9.0E-06 TTTCTTTTTAAAAAAA 16
V_OCT4_02_M01124 TRANSFAC - 19747743 19747757 8.0E-06 TTTCTTTTTAAAAAA 15
V_SOX11_03_M02795 TRANSFAC + 19747762 19747778 0.0E+00 TAAAAAACAAAGGACAT 17
V_SOX11_03_M02795 TRANSFAC + 19747809 19747825 3.0E-06 AGAAAGACAAAGAATGA 17
V_CTCF_01_M01200 TRANSFAC - 19741184 19741203 5.0E-06 GGCCCCAGCAGGGGGAGCCA 20
V_CTCF_01_M01200 TRANSFAC + 19744222 19744241 2.0E-06 GCGGCCGGCAGGGGGAGCGA 20
V_ISGF4G_04_M02875 TRANSFAC + 19747754 19747767 2.0E-06 GAAAAACATAAAAA 14
V_FOXO1_Q5_M01216 TRANSFAC + 19747764 19747772 1.0E-06 AAAAACAAA 9
V_HOXD9_Q2_M01834 TRANSFAC + 19747757 19747766 2.0E-06 AAACATAAAA 10
V_ZIC2_05_M02940 TRANSFAC - 19744502 19744516 3.0E-06 TCGCGCAGCAGGATA 15
V_MTF1_06_M02882 TRANSFAC + 19747748 19747761 9.0E-06 TAAAAAGAAAAACA 14
V_MTF1_06_M02882 TRANSFAC + 19747759 19747772 1.0E-06 ACATAAAAAACAAA 14
V_MTF1_06_M02882 TRANSFAC + 19747821 19747834 9.0E-06 AATGATTAAAAATA 14
V_FAC1_01_M00456 TRANSFAC + 19747752 19747765 4.0E-06 AAGAAAAACATAAA 14
V_FAC1_01_M00456 TRANSFAC + 19747757 19747770 7.0E-06 AAACATAAAAAACA 14
V_MYOD_Q6_01_M00929 TRANSFAC + 19744260 19744277 7.0E-06 CCGGGCCAGGTGAGGGAG 18
V_SMAD4_04_M02898 TRANSFAC - 19744435 19744451 4.0E-06 GCCGCCCCGCCACCCCG 17
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 19746247 19746255 8.0E-06 GAGGGTGGG 9
V_FOXL1_02_M02857 TRANSFAC + 19747751 19747766 8.0E-06 AAAGAAAAACATAAAA 16
V_PLAG1_01_M01778 TRANSFAC + 19741198 19741213 7.0E-06 GGGGCCACAGAAGGGA 16
V_TCF7_04_M02921 TRANSFAC - 19747741 19747755 2.0E-06 TCTTTTTAAAAAAAA 15
V_GATA3_01_M00077 TRANSFAC + 19747909 19747917 4.0E-06 GAGATAGGG 9
V_RSRFC4_01_M00026 TRANSFAC - 19747823 19747838 7.0E-06 ACTTTATTTTTAATCA 16
V_T3RBETA_Q6_01_M02119 TRANSFAC - 19746157 19746173 1.0E-06 GAGGGAGCCGAGGACAC 17
V_SRF_06_M02916 TRANSFAC - 19747738 19747754 1.0E-06 CTTTTTAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 19747745 19747761 8.0E-06 TTTTAAAAAGAAAAACA 17
V_SRF_06_M02916 TRANSFAC + 19747746 19747762 1.0E-06 TTTAAAAAGAAAAACAT 17
V_SRF_06_M02916 TRANSFAC + 19747747 19747763 2.0E-06 TTAAAAAGAAAAACATA 17
V_SRF_06_M02916 TRANSFAC + 19747824 19747840 3.0E-06 GATTAAAAATAAAGTGA 17
V_SOX4_01_M01308 TRANSFAC + 19747767 19747774 1.0E-05 AACAAAGG 8
V_FOXO1_01_M00473 TRANSFAC + 19747763 19747772 2.0E-06 AAAAAACAAA 10
V_SOX2_Q6_M01272 TRANSFAC - 19747763 19747778 2.0E-06 ATGTCCTTTGTTTTTT 16
V_MAFK_04_M02880 TRANSFAC + 19745400 19745414 1.0E-06 AAGAAAAATGCACTA 15
V_GATA1_02_M00126 TRANSFAC + 19747906 19747919 6.0E-06 ACAGAGATAGGGGA 14
V_GLIS2_04_M02863 TRANSFAC - 19747741 19747754 1.0E-05 CTTTTTAAAAAAAA 14
V_GLIS2_04_M02863 TRANSFAC + 19747825 19747838 8.0E-06 ATTAAAAATAAAGT 14
V_SMAD1_01_M01590 TRANSFAC + 19747749 19747760 8.0E-06 AAAAAGAAAAAC 12
V_SMAD1_01_M01590 TRANSFAC + 19747764 19747775 0.0E+00 AAAAACAAAGGA 12
V_SMAD1_01_M01590 TRANSFAC + 19747811 19747822 2.0E-06 AAAGACAAAGAA 12
V_SOX9_Q4_M01284 TRANSFAC + 19747766 19747776 0.0E+00 AAACAAAGGAC 11
V_ZIC1_05_M02939 TRANSFAC - 19744502 19744516 3.0E-06 TCGCGCAGCAGGATA 15
V_NANOG_02_M01247 TRANSFAC + 19747745 19747764 0.0E+00 TTTTAAAAAGAAAAACATAA 20
V_NANOG_02_M01247 TRANSFAC + 19747751 19747770 7.0E-06 AAAGAAAAACATAAAAAACA 20
V_NANOG_02_M01247 TRANSFAC + 19747760 19747779 0.0E+00 CATAAAAAACAAAGGACATA 20
V_NANOG_02_M01247 TRANSFAC + 19747807 19747826 2.0E-06 AAAGAAAGACAAAGAATGAT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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