Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

UPF3A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 65110 UPF3 regulator of nonsense transcripts homolog A (yeast) chr13 + 115042058 - 115047558 115047058 Transcription Factor Binding Sites   Download all TFBS in the UPF3A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RXRG_nuclearreceptor_full_dimeric_14_2 SELEX - 115046959 115046972 4.0E-06 GGGGTGGTGACCTC 14 POU4F2_POU_full_monomeric_16_1 SELEX - 115046730 115046745 6.0E-06 TTGAATTCTTAATTTT 16 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 115046092 115046104 5.0E-06 CTTAACAAAAACA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 115046591 115046603 2.0E-06 AAAAACAAAAAAA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 115051122 115051134 3.0E-06 AAAAACAAATACA 13 Pax5_MA0014.1 JASPAR - 115046273 115046292 0.0E+00 AAATCACTGAGGCGTGAACA 20 PAX6_PAX_DBD_monomeric_19_1 SELEX + 115046274 115046292 0.0E+00 GTTCACGCCTCAGTGATTT 19 TBX1_TBX_DBD_dimeric_20_2 SELEX - 115044942 115044961 6.0E-06 TGAACACTTCCATCTGTGAA 20 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 115045441 115045459 2.0E-06 GAAGGTCAAATGAAGGGTC 19 Pax6_MA0069.1 JASPAR + 115046275 115046288 2.0E-06 TTCACGCCTCAGTG 14 ZNF713_C2H2_full_monomeric_17_1 SELEX + 115047762 115047778 0.0E+00 AAGAAAAATACCACCAA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 115047330 115047340 1.0E-05 GCCCCGCCCCC 11 SOX21_HMG_DBD_dimeric_13_2 SELEX - 115051165 115051177 4.0E-06 AGAATGGAAGTCA 13 POU3F3_POU_DBD_monomeric_12_1 SELEX + 115047722 115047733 6.0E-06 TTGAATAAATAC 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 115046520 115046537 7.0E-06 GCGGATCACTTGAGGTCA 18 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 115047774 115047790 1.0E-05 ACCAACAAAGAAACACA 17 SRY_HMG_DBD_dimeric_13_2 SELEX + 115051165 115051177 9.0E-06 TGACTTCCATTCT 13 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 115046588 115046599 4.0E-06 TAAAAAAACAAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 115047721 115047733 4.0E-06 TTTGAATAAATAC 13 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX - 115046959 115046972 3.0E-06 GGGGTGGTGACCTC 14 ZNF435_C2H2_full_dimeric_18_1 SELEX - 115044953 115044970 8.0E-06 TTGCTTAACTGAACACTT 18 HNF1B_MA0153.1 JASPAR - 115044978 115044989 3.0E-06 TTAGTATGTAAC 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 115046447 115046457 8.0E-06 TAAAAAAATAT 11 PAX5_PAX_DBD_monomeric_18_1 SELEX + 115046274 115046291 2.0E-06 GTTCACGCCTCAGTGATT 18 EWSR1-FLI1_MA0149.1 JASPAR + 115047375 115047392 1.0E-06 GGAGGGAGGGGAGGGAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 115047384 115047401 1.0E-06 GGAGGGAGGGGAGGGAGG 18 SOX15_HMG_full_dimeric_15_3 SELEX + 115051164 115051178 4.0E-06 ATGACTTCCATTCTC 15 EGR1_C2H2_full_monomeric_14_1 SELEX - 115047266 115047279 3.0E-06 ACCGCCCCCGCAAC 14 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 115051074 115051088 1.0E-06 TTGATGATTCAGCAT 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 115051074 115051088 0.0E+00 ATGCTGAATCATCAA 15 PAX2_PAX_DBD_monomeric_18_1 SELEX + 115046274 115046291 3.0E-06 GTTCACGCCTCAGTGATT 18 ZNF238_C2H2_full_monomeric_13_1 SELEX + 115047785 115047797 8.0E-06 AACACAGATGTGG 13 ZIC4_C2H2_DBD_monomeric_15_1 SELEX - 115047487 115047501 7.0E-06 GACCACCTGCGGGGA 15 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 115049119 115049132 6.0E-06 GACATTATCATAAA 14 POU4F3_POU_DBD_monomeric_16_1 SELEX - 115046730 115046745 4.0E-06 TTGAATTCTTAATTTT 16 LEF1_HMG_DBD_monomeric_15_1 SELEX - 115049226 115049240 2.0E-06 AAAGATGAAAGCAGA 15 ETV2_ETS_DBD_monomeric_11_1 SELEX - 115051761 115051771 8.0E-06 AACAGGAAACA 11 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 115047265 115047280 2.0E-06 CACCGCCCCCGCAACC 16 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 115050531 115050540 8.0E-06 AACCATAAAA 10 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 115045442 115045459 2.0E-06 AAGGTCAAATGAAGGGTC 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 115049127 115049144 8.0E-06 AATGTCACCAGGAAGTCA 18 POU3F3_POU_DBD_monomeric_13_1 SELEX + 115049119 115049131 1.0E-05 TTTATGATAATGT 13 SOX8_HMG_full_dimeric_13_1 SELEX + 115051164 115051176 6.0E-06 ATGACTTCCATTC 13 Sox17_HMG_DBD_dimeric_15_2 SELEX + 115051164 115051178 6.0E-06 ATGACTTCCATTCTC 15 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 115051124 115051134 4.0E-06 AAAAACAAATA 11 E2F8_E2F_DBD_dimeric_12_1 SELEX - 115045314 115045325 5.0E-06 TTTCCCCCCAAG 12 SOX2_HMG_full_dimeric_15_1 SELEX + 115051164 115051178 1.0E-06 ATGACTTCCATTCTC 15 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 115045995 115046012 8.0E-06 TTAATCACACATCATCAG 18 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 115046599 115046608 9.0E-06 AAAAATTAGC 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 115050530 115050540 8.0E-06 AACCATAAAAC 11 EGR2_C2H2_full_monomeric_15_1 SELEX - 115047266 115047280 8.0E-06 CACCGCCCCCGCAAC 15 SP1_MA0079.2 JASPAR - 115047330 115047339 7.0E-06 CCCCGCCCCC 10 FOXI1_MA0042.1 JASPAR + 115051121 115051132 2.0E-06 GTGTATTTGTTT 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 115049054 115049067 2.0E-06 TTGGAAAATTCCTA 14 Gfi_MA0038.1 JASPAR - 115046284 115046293 3.0E-06 AAAATCACTG 10 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 115051073 115051089 0.0E+00 TTTGATGATTCAGCATA 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 115051073 115051089 0.0E+00 TATGCTGAATCATCAAA 17 SP4_C2H2_full_monomeric_17_1 SELEX - 115047034 115047050 7.0E-06 CCAGCCCCGCCCCTCCT 17 MAFK_bZIP_full_dimeric_15_1 SELEX + 115051074 115051088 0.0E+00 TTGATGATTCAGCAT 15 MAFK_bZIP_full_dimeric_15_1 SELEX - 115051074 115051088 0.0E+00 ATGCTGAATCATCAA 15 Egr3_C2H2_DBD_monomeric_15_1 SELEX - 115047265 115047279 3.0E-06 ACCGCCCCCGCAACC 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 115049229 115049240 3.0E-06 AAAGATGAAAGC 12 SOX14_HMG_DBD_dimeric_15_1 SELEX + 115051164 115051178 1.0E-06 ATGACTTCCATTCTC 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 115046591 115046601 8.0E-06 AAAAACAAAAA 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 115051124 115051134 3.0E-06 AAAAACAAATA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 115051071 115051091 0.0E+00 CATTTGATGATTCAGCATATA 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 115051071 115051091 0.0E+00 TATATGCTGAATCATCAAATG 21 PRDM4_C2H2_full_monomeric_13_1 SELEX + 115046759 115046771 6.0E-06 TTTCATGGCGCCC 13 EGR4_C2H2_DBD_monomeric_16_2 SELEX - 115047265 115047280 5.0E-06 CACCGCCCCCGCAACC 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 115046732 115046748 3.0E-06 CATTTGAATTCTTAATT 17 PAX9_PAX_DBD_monomeric_17_1 SELEX + 115046274 115046290 9.0E-06 GTTCACGCCTCAGTGAT 17 TBX2_TBX_full_monomeric_11_1 SELEX + 115045296 115045306 7.0E-06 AGGGTGTTAAA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX + 115049120 115049131 8.0E-06 TTATGATAATGT 12 Foxd3_MA0041.1 JASPAR - 115046589 115046600 1.0E-06 TTTTGTTTTTTT 12 MAFG_bZIP_full_dimeric_21_1 SELEX + 115051071 115051091 0.0E+00 CATTTGATGATTCAGCATATA 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 115051071 115051091 0.0E+00 TATATGCTGAATCATCAAATG 21 Myf_MA0055.1 JASPAR + 115047226 115047237 7.0E-06 CAGCAGCAGGAG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX + 115046438 115046454 7.0E-06 GTGTGTTCATAAAAAAA 17 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 115049146 115049154 2.0E-06 TGCTGTTAA 9 POU3F2_POU_DBD_monomeric_12_1 SELEX + 115049120 115049131 6.0E-06 TTATGATAATGT 12 ELF5_MA0136.1 JASPAR - 115044845 115044853 2.0E-06 TATTTCCTT 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 115046442 115046452 7.0E-06 GTTCATAAAAA 11 Sox2_MA0143.1 JASPAR - 115046587 115046601 5.0E-06 TTTTTGTTTTTTTAA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 115046589 115046601 0.0E+00 AAAAAAACAAAAA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 115051120 115051132 6.0E-06 AAACAAATACACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 115051124 115051136 9.0E-06 GGAAAAACAAATA 13 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 115049123 115049136 6.0E-06 TGGTGACATTATCA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 115046092 115046104 5.0E-06 CTTAACAAAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 115046591 115046603 0.0E+00 AAAAACAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 115051122 115051134 2.0E-06 AAAAACAAATACA 13 NFIA_NFI_full_monomeric_10_1 SELEX + 115050480 115050489 2.0E-06 ATTGCCAAAT 10 NFE2L2_MA0150.1 JASPAR + 115051077 115051087 2.0E-06 ATGATTCAGCA 11 TBX1_TBX_DBD_dimeric_20_1 SELEX - 115045987 115046006 7.0E-06 ATGTGTGATTAAAAGTAGGA 20 Sox1_HMG_DBD_dimeric_15_2 SELEX + 115051164 115051178 1.0E-06 ATGACTTCCATTCTC 15 POU4F1_POU_DBD_monomeric_14_1 SELEX - 115046732 115046745 3.0E-06 TTGAATTCTTAATT 14 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 115046361 115046372 0.0E+00 CTACATGAAAAA 12 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 115047799 115047810 0.0E+00 TTACATGAAAAA 12 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX + 115046959 115046972 7.0E-06 GAGGTCACCACCCC 14 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX - 115046959 115046972 5.0E-06 GGGGTGGTGACCTC 14 V_NFAT_Q4_01_M00935 TRANSFAC - 115049058 115049067 1.0E-06 TTGGAAAATT 10 V_HOXA9_01_M01351 TRANSFAC + 115046440 115046456 4.0E-06 GTGTTCATAAAAAAATA 17 V_MTF1_01_M01242 TRANSFAC - 115045038 115045057 4.0E-06 ATGTACAGAACTTTACAGCC 20 V_FOXP1_01_M00987 TRANSFAC - 115046730 115046749 5.0E-06 ACATTTGAATTCTTAATTTT 20 V_FOXP1_01_M00987 TRANSFAC - 115047762 115047781 6.0E-06 TTGTTGGTGGTATTTTTCTT 20 V_FOXP1_01_M00987 TRANSFAC + 115051115 115051134 1.0E-06 CTCTTTGTGTATTTGTTTTT 20 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 115049120 115049133 4.0E-06 TGACATTATCATAA 14 V_HNF3B_01_M00131 TRANSFAC - 115046588 115046602 3.0E-06 TTTTTTGTTTTTTTA 15 V_KLF15_Q2_M01714 TRANSFAC + 115047033 115047046 6.0E-06 GAGGAGGGGCGGGG 14 V_AP1_Q2_M00173 TRANSFAC + 115051033 115051043 3.0E-06 AATGACTCAGT 11 V_DBX1_01_M01483 TRANSFAC - 115046386 115046402 1.0E-05 AAGTTATTTTAAAATGG 17 V_DBX1_01_M01483 TRANSFAC + 115046727 115046743 1.0E-06 AAAAAAATTAAGAATTC 17 V_FREAC7_01_M00293 TRANSFAC + 115047721 115047736 2.0E-06 TTTGAATAAATACATT 16 V_TCF3_01_M01594 TRANSFAC - 115046589 115046601 0.0E+00 TTTTTGTTTTTTT 13 V_AML_Q6_M00769 TRANSFAC + 115047788 115047802 1.0E-06 ACAGATGTGGTTTAC 15 V_CDX2_Q5_01_M01659 TRANSFAC + 115046443 115046453 1.0E-06 TTCATAAAAAA 11 V_E2F4_04_M02847 TRANSFAC + 115048021 115048037 9.0E-06 CTCTCGGCGCCACGGGT 17 V_FLI1_Q6_M01208 TRANSFAC + 115049135 115049145 1.0E-06 CAGGAAGTCAC 11 V_XFD1_01_M00267 TRANSFAC + 115047723 115047736 6.0E-06 TGAATAAATACATT 14 V_RHOX11_01_M01347 TRANSFAC + 115044663 115044679 6.0E-06 AGTAAGCTGTAATTCGG 17 V_RHOX11_01_M01347 TRANSFAC - 115049088 115049104 3.0E-06 AGGATGCTGTTTAGGAA 17 V_CEBP_Q3_M00770 TRANSFAC - 115050480 115050491 5.0E-06 GGATTTGGCAAT 12 V_SOX30_03_M02804 TRANSFAC + 115046590 115046605 8.0E-06 AAAAAACAAAAAAATT 16 V_HMGIY_Q3_M01010 TRANSFAC - 115045302 115045316 0.0E+00 AAGTCAATTTTTTAA 15 V_FOXD3_01_M00130 TRANSFAC - 115046589 115046600 1.0E-06 TTTTGTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 115044970 115044985 1.0E-06 TATGTAACTTTACTTT 16 V_BCL6_01_M01183 TRANSFAC + 115045022 115045037 9.0E-06 CTTCCTGCTTTGCTTT 16 V_GM397_03_M02760 TRANSFAC + 115049066 115049082 6.0E-06 AAAATGTACACTGACTT 17 V_ETS_B_M00340 TRANSFAC + 115049133 115049146 7.0E-06 ACCAGGAAGTCACT 14 V_ETS_B_M00340 TRANSFAC - 115051758 115051771 2.0E-06 AACAGGAAACATGT 14 V_MMEF2_Q6_M00405 TRANSFAC + 115046387 115046402 5.0E-06 CATTTTAAAATAACTT 16 V_SP1_Q6_01_M00931 TRANSFAC + 115047038 115047047 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 115047331 115047340 4.0E-06 GGGGCGGGGC 10 V_EOMES_03_M02747 TRANSFAC + 115045293 115045309 1.0E-06 AGAAGGGTGTTAAAAAA 17 V_SRY_02_M00160 TRANSFAC + 115046591 115046602 2.0E-06 AAAAACAAAAAA 12 V_NFAT3_Q3_M01734 TRANSFAC + 115049236 115049245 6.0E-06 TCTTTTTCCT 10 V_POU1F1_Q6_M00744 TRANSFAC + 115047722 115047731 5.0E-06 TTGAATAAAT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 115046590 115046601 4.0E-06 AAAAAACAAAAA 12 V_FOXO3A_Q1_M01137 TRANSFAC - 115051124 115051135 7.0E-06 GAAAAACAAATA 12 V_POU3F2_02_M00464 TRANSFAC + 115049120 115049129 2.0E-06 TTATGATAAT 10 V_RFX4_03_M02789 TRANSFAC + 115051138 115051152 1.0E-06 CCACATAGCAACGAA 15 V_HOXC4_01_M01369 TRANSFAC + 115046726 115046742 7.0E-06 CAAAAAAATTAAGAATT 17 V_HNF3_Q6_01_M01012 TRANSFAC - 115046589 115046606 8.0E-06 TAATTTTTTTGTTTTTTT 18 V_HNF3_Q6_01_M01012 TRANSFAC + 115051119 115051136 2.0E-06 TTGTGTATTTGTTTTTCC 18 V_FOXJ1_03_M02750 TRANSFAC + 115046588 115046603 7.0E-06 TAAAAAAACAAAAAAA 16 V_SP1_03_M02281 TRANSFAC - 115047330 115047339 7.0E-06 CCCCGCCCCC 10 V_HFH4_01_M00742 TRANSFAC + 115051121 115051133 3.0E-06 GTGTATTTGTTTT 13 V_HOXC6_01_M01406 TRANSFAC + 115046726 115046742 8.0E-06 CAAAAAAATTAAGAATT 17 V_SP1_02_M01303 TRANSFAC + 115047400 115047410 8.0E-06 GGGGCGGGGGC 11 V_TCFAP2E_04_M02926 TRANSFAC + 115046443 115046456 0.0E+00 TTCATAAAAAAATA 14 V_TCFAP2E_04_M02926 TRANSFAC + 115046583 115046596 2.0E-06 TACTTTAAAAAAAC 14 V_TCFAP2E_04_M02926 TRANSFAC + 115046592 115046605 4.0E-06 AAAACAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 115050517 115050530 1.0E-05 CACTTGGAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 115051020 115051033 1.0E-05 CAAGTCAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 115051021 115051034 2.0E-06 AAGTCAAAAAAAAA 14 V_LDSPOLYA_B_M00317 TRANSFAC + 115046433 115046448 4.0E-06 TGCCTGTGTGTTCATA 16 V_MEF2A_Q6_M02024 TRANSFAC - 115046389 115046398 2.0E-06 TATTTTAAAA 10 V_MEF2A_Q6_M02024 TRANSFAC - 115047983 115047992 5.0E-06 TATTTAAAAC 10 V_RHOX11_02_M01384 TRANSFAC + 115044663 115044679 8.0E-06 AGTAAGCTGTAATTCGG 17 V_RHOX11_02_M01384 TRANSFAC - 115049088 115049104 4.0E-06 AGGATGCTGTTTAGGAA 17 V_AR_03_M00956 TRANSFAC - 115051912 115051938 3.0E-06 ATTACATTTGCTCAGTGTTCTTAATTT 27 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 115046530 115046544 1.0E-06 TGAGGTCAGGAGTTA 15 V_HNF1_C_M00206 TRANSFAC - 115045299 115045315 0.0E+00 AGTCAATTTTTTAACAC 17 V_AP1_Q6_M00174 TRANSFAC + 115051033 115051043 1.0E-06 AATGACTCAGT 11 V_ETS_Q4_M00771 TRANSFAC - 115049135 115049146 7.0E-06 AGTGACTTCCTG 12 RXRA_VDR_MA0074.1 JASPAR + 115044640 115044654 8.0E-06 ATGTCAAAAGGTTCA 15 V_ELF4_04_M02850 TRANSFAC + 115046441 115046457 1.0E-06 TGTTCATAAAAAAATAT 17 V_ELF4_04_M02850 TRANSFAC + 115046442 115046458 3.0E-06 GTTCATAAAAAAATATG 17 V_ELF4_04_M02850 TRANSFAC + 115046443 115046459 4.0E-06 TTCATAAAAAAATATGT 17 V_ELF4_04_M02850 TRANSFAC + 115046584 115046600 6.0E-06 ACTTTAAAAAAACAAAA 17 V_ELF4_04_M02850 TRANSFAC + 115046586 115046602 1.0E-06 TTTAAAAAAACAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 115051022 115051038 2.0E-06 AGTCAAAAAAAAATGAC 17 V_GC_01_M00255 TRANSFAC + 115047036 115047049 1.0E-06 GAGGGGCGGGGCTG 14 V_SOX7_03_M02807 TRANSFAC + 115046587 115046608 1.0E-06 TTAAAAAAACAAAAAAATTAGC 22 V_HELIOSA_02_M01004 TRANSFAC - 115044792 115044802 4.0E-06 TTTAGGATAAA 11 V_HELIOSA_02_M01004 TRANSFAC - 115049059 115049069 4.0E-06 TTTTGGAAAAT 11 V_HELIOSA_02_M01004 TRANSFAC - 115049238 115049248 6.0E-06 AGAAGGAAAAA 11 V_HELIOSA_02_M01004 TRANSFAC - 115050519 115050529 7.0E-06 ACTTGGAAAAA 11 V_FOXA2_02_M02853 TRANSFAC + 115046588 115046602 5.0E-06 TAAAAAAACAAAAAA 15 V_POU3F2_01_M00463 TRANSFAC + 115047722 115047735 3.0E-06 TTGAATAAATACAT 14 V_EGR1_01_M00243 TRANSFAC + 115047267 115047278 4.0E-06 TTGCGGGGGCGG 12 V_MYF_01_M01302 TRANSFAC + 115047226 115047237 7.0E-06 CAGCAGCAGGAG 12 V_ZFP105_03_M02827 TRANSFAC + 115046587 115046601 0.0E+00 TTAAAAAAACAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 115046590 115046604 0.0E+00 AAAAAACAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC + 115046591 115046605 1.0E-05 AAAAACAAAAAAATT 15 V_ZFP105_03_M02827 TRANSFAC + 115051023 115051037 4.0E-06 GTCAAAAAAAAATGA 15 V_NFAT_Q6_M00302 TRANSFAC - 115049058 115049069 4.0E-06 TTTTGGAAAATT 12 V_NGFIC_01_M00244 TRANSFAC + 115047267 115047278 5.0E-06 TTGCGGGGGCGG 12 V_POLY_C_M00212 TRANSFAC + 115044971 115044988 9.0E-06 AAGTAAAGTTACATACTA 18 V_NKX61_01_M00424 TRANSFAC - 115046728 115046740 1.0E-06 TTCTTAATTTTTT 13 V_HIC1_03_M01073 TRANSFAC - 115047275 115047292 6.0E-06 GAGGTTTGCCCGCACCGC 18 V_HIC1_03_M01073 TRANSFAC + 115047866 115047883 7.0E-06 CAGCGTTGCCCGCCCGGC 18 V_KROX_Q6_M00982 TRANSFAC - 115047325 115047338 1.0E-06 CCCGCCCCCGTCCC 14 V_IRX4_01_M01410 TRANSFAC + 115046358 115046374 3.0E-06 AGCCTACATGAAAAAGA 17 V_IRX4_01_M01410 TRANSFAC - 115047795 115047811 4.0E-06 ATTTTTCATGTAAACCA 17 V_AMEF2_Q6_M00403 TRANSFAC + 115046387 115046404 3.0E-06 CATTTTAAAATAACTTCC 18 V_AP1_Q6_01_M00925 TRANSFAC + 115051034 115051042 7.0E-06 ATGACTCAG 9 V_HOXB9_01_M01426 TRANSFAC - 115050527 115050542 2.0E-06 GAAACCATAAAACACT 16 V_AP1_Q4_M00188 TRANSFAC + 115051033 115051043 3.0E-06 AATGACTCAGT 11 V_SP1_Q6_M00196 TRANSFAC + 115047036 115047048 2.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC + 115047329 115047341 2.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 115047398 115047410 9.0E-06 GAGGGGCGGGGGC 13 V_HNF1B_04_M02266 TRANSFAC - 115044978 115044989 3.0E-06 TTAGTATGTAAC 12 V_IRF3_Q3_M01279 TRANSFAC - 115044964 115044976 2.0E-06 TTACTTTTGCTTA 13 V_EVI1_01_M00078 TRANSFAC - 115049245 115049260 6.0E-06 TGACAGGAGAAGAGAA 16 V_EVI1_01_M00078 TRANSFAC - 115051174 115051189 8.0E-06 TGATAAAAGTAGAGAA 16 V_MAZ_Q6_01_M02023 TRANSFAC + 115047376 115047389 0.0E+00 GAGGGAGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 115047381 115047394 3.0E-06 AGGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 115047385 115047398 0.0E+00 GAGGGAGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 115047390 115047403 3.0E-06 AGGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 115047394 115047407 1.0E-05 GAGGGAGGGGCGGG 14 V_HNF3_Q6_M00791 TRANSFAC + 115046587 115046599 6.0E-06 TTAAAAAAACAAA 13 V_HNF3_Q6_M00791 TRANSFAC + 115046591 115046603 4.0E-06 AAAAACAAAAAAA 13 V_HNF3_Q6_M00791 TRANSFAC + 115047722 115047734 8.0E-06 TTGAATAAATACA 13 V_HNF3_Q6_M00791 TRANSFAC - 115051122 115051134 1.0E-06 AAAAACAAATACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 115047722 115047732 8.0E-06 TATTTATTCAA 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 115051124 115051134 0.0E+00 TATTTGTTTTT 11 V_EGR1_Q6_M01873 TRANSFAC + 115047269 115047278 4.0E-06 GCGGGGGCGG 10 V_STAT5A_02_M00460 TRANSFAC - 115044837 115044860 3.0E-06 TTCCCAGTATTTCCTTTAACGATA 24 V_CDX2_Q5_M00729 TRANSFAC + 115050527 115050540 6.0E-06 AGTGTTTTATGGTT 14 V_LXR_DR4_Q3_M00766 TRANSFAC - 115046522 115046537 6.0E-06 TGACCTCAAGTGATCC 16 V_TTF1_Q6_M00794 TRANSFAC - 115046524 115046535 7.0E-06 ACCTCAAGTGAT 12 V_EGR1_04_M02848 TRANSFAC + 115046788 115046803 3.0E-06 GGGGGAGTGGGATAAA 16 V_TATA_C_M00216 TRANSFAC + 115046584 115046593 6.0E-06 ACTTTAAAAA 10 V_RFXDC2_03_M02790 TRANSFAC + 115051138 115051152 0.0E+00 CCACATAGCAACGAA 15 V_ELF5_01_M01197 TRANSFAC + 115044843 115044853 1.0E-06 TAAAGGAAATA 11 V_GR_01_M00955 TRANSFAC - 115051912 115051938 5.0E-06 ATTACATTTGCTCAGTGTTCTTAATTT 27 V_GR_Q6_M00192 TRANSFAC - 115044781 115044799 9.0E-06 AGGATAAACTGTGTCCTGA 19 V_SOX12_04_M02900 TRANSFAC + 115046589 115046604 8.0E-06 AAAAAAACAAAAAAAT 16 V_SOX12_04_M02900 TRANSFAC - 115051113 115051128 2.0E-06 AAATACACAAAGAGAA 16 V_TCF7_03_M02817 TRANSFAC - 115049225 115049241 8.0E-06 AAAAGATGAAAGCAGAA 17 V_AP1_C_M00199 TRANSFAC + 115051034 115051042 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC + 115046384 115046395 8.0E-06 AGCCATTTTAAA 12 V_MEF2_Q6_01_M00941 TRANSFAC - 115046390 115046401 1.0E-06 AGTTATTTTAAA 12 V_MEF2_Q6_01_M00941 TRANSFAC - 115046586 115046597 6.0E-06 TGTTTTTTTAAA 12 V_NCX_02_M01420 TRANSFAC + 115046727 115046743 7.0E-06 AAAAAAATTAAGAATTC 17 V_STAT4_Q5_M02117 TRANSFAC + 115044842 115044851 2.0E-06 TTAAAGGAAA 10 V_OCT4_02_M01124 TRANSFAC - 115046585 115046599 5.0E-06 TTTGTTTTTTTAAAG 15 V_SOX11_03_M02795 TRANSFAC + 115046589 115046605 0.0E+00 AAAAAAACAAAAAAATT 17 V_NR1B1_Q6_M02110 TRANSFAC + 115045441 115045450 1.0E-05 GAAGGTCAAA 10 V_TBX5_01_M01019 TRANSFAC + 115045295 115045306 6.0E-06 AAGGGTGTTAAA 12 V_SOX9_B1_M00410 TRANSFAC + 115044721 115044734 5.0E-06 TAAAAACAATGTGT 14 V_ICSBP_Q6_M00699 TRANSFAC - 115050536 115050547 8.0E-06 GACCTGAAACCA 12 V_FOXO1_Q5_M01216 TRANSFAC + 115046591 115046599 1.0E-06 AAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC - 115051126 115051134 1.0E-06 AAAAACAAA 9 V_FOXM1_01_M00630 TRANSFAC + 115045307 115045315 7.0E-06 AAATTGACT 9 V_HOXD9_Q2_M01834 TRANSFAC - 115050531 115050540 4.0E-06 AACCATAAAA 10 V_IRF7_01_M00453 TRANSFAC + 115046735 115046752 4.0E-06 TAAGAATTCAAATGTGAA 18 V_GATA4_Q3_M00632 TRANSFAC - 115049077 115049088 5.0E-06 AGATAGAAGTCA 12 V_BCL6B_04_M02844 TRANSFAC - 115047033 115047048 9.0E-06 AGCCCCGCCCCTCCTC 16 V_SP4_Q5_M01273 TRANSFAC - 115047037 115047047 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 115047330 115047340 1.0E-06 GCCCCGCCCCC 11 V_IRX3_02_M01485 TRANSFAC + 115047796 115047812 9.0E-06 GGTTTACATGAAAAATG 17 V_AP1_Q4_01_M00926 TRANSFAC - 115051034 115051041 1.0E-05 TGAGTCAT 8 V_SOX15_03_M02799 TRANSFAC + 115045300 115045316 9.0E-06 TGTTAAAAAATTGACTT 17 V_SOX15_03_M02799 TRANSFAC + 115046589 115046605 3.0E-06 AAAAAAACAAAAAAATT 17 V_MTF1_06_M02882 TRANSFAC + 115046590 115046603 2.0E-06 AAAAAACAAAAAAA 14 V_TTF1_Q5_M02034 TRANSFAC + 115044654 115044667 2.0E-06 AGACACTTGAGTAA 14 V_TAL1_01_M01591 TRANSFAC + 115049240 115049252 1.0E-06 TTTCCTTCTCTTC 13 V_IPF1_05_M01255 TRANSFAC + 115046729 115046740 8.0E-06 AAAAATTAAGAA 12 V_GATA1_04_M00128 TRANSFAC - 115051180 115051192 6.0E-06 TTCTGATAAAAGT 13 V_AP1FJ_Q2_M00172 TRANSFAC + 115051033 115051043 6.0E-06 AATGACTCAGT 11 V_FOXL1_02_M02857 TRANSFAC - 115046093 115046108 9.0E-06 GGATCTTAACAAAAAC 16 V_FOXL1_02_M02857 TRANSFAC + 115046388 115046403 2.0E-06 ATTTTAAAATAACTTC 16 V_FOXL1_02_M02857 TRANSFAC + 115046587 115046602 2.0E-06 TTAAAAAAACAAAAAA 16 V_FOXL1_04_M02753 TRANSFAC + 115046586 115046602 5.0E-06 TTTAAAAAAACAAAAAA 17 V_ZSCAN4_04_M02942 TRANSFAC - 115046305 115046320 7.0E-06 TCAAGCACACACAAGA 16 V_HDX_01_M01333 TRANSFAC - 115047684 115047700 1.0E-06 TAGGAGAAATCAGGGTA 17 V_RHOX11_05_M03099 TRANSFAC + 115044663 115044679 8.0E-06 AGTAAGCTGTAATTCGG 17 V_RHOX11_05_M03099 TRANSFAC - 115049088 115049104 4.0E-06 AGGATGCTGTTTAGGAA 17 V_ZBTB4_04_M02929 TRANSFAC - 115046241 115046256 6.0E-06 GCGTCACTGGCAGAAA 16 V_TCF1_06_M02815 TRANSFAC - 115044956 115044972 6.0E-06 TTTTGCTTAACTGAACA 17 V_GATA3_01_M00077 TRANSFAC + 115044902 115044910 4.0E-06 GAGATAGGG 9 V_FRA1_Q5_M01267 TRANSFAC - 115051034 115051041 1.0E-05 TGAGTCAT 8 V_FOXO3_01_M00477 TRANSFAC - 115046588 115046601 3.0E-06 TTTTTGTTTTTTTA 14 V_TCF4_Q5_M00671 TRANSFAC + 115047853 115047860 1.0E-05 CCTTTGAA 8 V_MTATA_B_M00320 TRANSFAC - 115047977 115047993 5.0E-06 GTATTTAAAACCGCACT 17 V_FOX_Q2_M00809 TRANSFAC + 115051121 115051133 4.0E-06 GTGTATTTGTTTT 13 V_PLZF_02_M01075 TRANSFAC + 115045031 115045059 8.0E-06 TTGCTTTGGCTGTAAAGTTCTGTACATGT 29 V_PLZF_02_M01075 TRANSFAC + 115045291 115045319 6.0E-06 TCAGAAGGGTGTTAAAAAATTGACTTGGG 29 V_PLZF_02_M01075 TRANSFAC - 115046573 115046601 5.0E-06 TTTTTGTTTTTTTAAAGTAGAGACGGGGT 29 V_T3RBETA_Q6_01_M02119 TRANSFAC + 115046522 115046538 2.0E-06 GGATCACTTGAGGTCAG 17 V_ETS1_B_M00339 TRANSFAC + 115049134 115049148 5.0E-06 CCAGGAAGTCACTGC 15 V_TITF1_Q3_M00432 TRANSFAC - 115044656 115044665 1.0E-06 ACTCAAGTGT 10 V_EGR1_06_M02744 TRANSFAC - 115047266 115047279 2.0E-06 ACCGCCCCCGCAAC 14 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 115046528 115046542 1.0E-06 CTTGAGGTCAGGAGT 15 V_SOX8_03_M02808 TRANSFAC - 115046589 115046605 8.0E-06 AATTTTTTTGTTTTTTT 17 V_SOX2_01_M02246 TRANSFAC - 115046587 115046601 5.0E-06 TTTTTGTTTTTTTAA 15 V_NUR77_Q5_M01217 TRANSFAC - 115045440 115045449 7.0E-06 TTGACCTTCC 10 V_SRF_06_M02916 TRANSFAC + 115046584 115046600 2.0E-06 ACTTTAAAAAAACAAAA 17 V_SRF_06_M02916 TRANSFAC + 115046585 115046601 0.0E+00 CTTTAAAAAAACAAAAA 17 V_SRF_06_M02916 TRANSFAC + 115046586 115046602 0.0E+00 TTTAAAAAAACAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 115046587 115046603 2.0E-06 TTAAAAAAACAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 115046588 115046604 9.0E-06 TAAAAAAACAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 115046589 115046605 2.0E-06 AAAAAAACAAAAAAATT 17 V_SRF_06_M02916 TRANSFAC + 115046590 115046606 2.0E-06 AAAAAACAAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC - 115050512 115050528 4.0E-06 CTTGGAAAAAAACACAG 17 V_SRF_06_M02916 TRANSFAC + 115051022 115051038 5.0E-06 AGTCAAAAAAAAATGAC 17 V_SRF_06_M02916 TRANSFAC + 115051023 115051039 9.0E-06 GTCAAAAAAAAATGACT 17 V_HFH3_01_M00289 TRANSFAC + 115051121 115051133 1.0E-06 GTGTATTTGTTTT 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 115047375 115047392 1.0E-06 GGAGGGAGGGGAGGGAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 115047384 115047401 1.0E-06 GGAGGGAGGGGAGGGAGG 18 V_FOXJ2_01_M00422 TRANSFAC + 115047720 115047737 3.0E-06 TTTTGAATAAATACATTT 18 V_FOXJ2_01_M00422 TRANSFAC - 115051119 115051136 1.0E-05 GGAAAAACAAATACACAA 18 V_VMAF_01_M00035 TRANSFAC + 115051072 115051090 0.0E+00 ATTTGATGATTCAGCATAT 19 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 115047793 115047800 1.0E-05 TGTGGTTT 8 V_YY1_01_M00059 TRANSFAC + 115046381 115046397 2.0E-06 GAAAGCCATTTTAAAAT 17 V_SOX1_03_M02802 TRANSFAC - 115047717 115047732 4.0E-06 TATTTATTCAAAAAGC 16 V_FOXO1_01_M00473 TRANSFAC + 115046590 115046599 2.0E-06 AAAAAACAAA 10 V_SOX2_Q6_M01272 TRANSFAC - 115046590 115046605 2.0E-06 AATTTTTTTGTTTTTT 16 V_NFE2_01_M00037 TRANSFAC - 115051034 115051044 5.0E-06 CACTGAGTCAT 11 V_RFX3_04_M02788 TRANSFAC + 115051134 115051156 1.0E-06 TCCCCCACATAGCAACGAAGTTA 23 V_PAX4_02_M00377 TRANSFAC + 115046598 115046608 2.0E-06 AAAAAATTAGC 11 V_PAX4_02_M00377 TRANSFAC + 115046728 115046738 2.0E-06 AAAAAATTAAG 11 V_SOX12_03_M02796 TRANSFAC - 115046588 115046601 7.0E-06 TTTTTGTTTTTTTA 14 V_MEF2_01_M00006 TRANSFAC + 115046388 115046403 1.0E-06 ATTTTAAAATAACTTC 16 V_SP1_Q2_01_M00933 TRANSFAC - 115047037 115047046 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 115047330 115047339 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 115047399 115047408 7.0E-06 CCCCGCCCCT 10 V_MEF2A_05_M01301 TRANSFAC - 115046390 115046401 0.0E+00 AGTTATTTTAAA 12 V_NFE2L2_01_M02263 TRANSFAC + 115051077 115051087 2.0E-06 ATGATTCAGCA 11 V_GATA5_03_M02756 TRANSFAC - 115049201 115049217 1.0E-06 AGTACTGATAAGGGAAC 17 V_FOXO4_01_M00472 TRANSFAC - 115051124 115051134 5.0E-06 AAAAACAAATA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 115047040 115047053 4.0E-06 GGCGGGGCTGGGGC 14 V_HMEF2_Q6_M00406 TRANSFAC + 115046388 115046403 1.0E-06 ATTTTAAAATAACTTC 16 V_ELF5_04_M02241 TRANSFAC - 115044845 115044853 2.0E-06 TATTTCCTT 9 V_GATA1_02_M00126 TRANSFAC - 115049203 115049216 1.0E-06 GTACTGATAAGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 115047036 115047048 3.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC + 115047329 115047341 3.0E-06 CGGGGGCGGGGCG 13 V_HOXD10_01_M01375 TRANSFAC + 115046440 115046456 8.0E-06 GTGTTCATAAAAAAATA 17 V_TCF11MAFG_01_M00284 TRANSFAC + 115051029 115051050 6.0E-06 AAAAAATGACTCAGTGGGTTTA 22 V_RHOX11_06_M03100 TRANSFAC + 115044663 115044679 6.0E-06 AGTAAGCTGTAATTCGG 17 V_RHOX11_06_M03100 TRANSFAC - 115049088 115049104 3.0E-06 AGGATGCTGTTTAGGAA 17 V_TCF3_05_M02920 TRANSFAC + 115051022 115051036 1.0E-06 AGTCAAAAAAAAATG 15 V_TCF3_05_M02920 TRANSFAC - 115051124 115051138 8.0E-06 GGGGAAAAACAAATA 15 V_TCF3_05_M02920 TRANSFAC - 115051125 115051139 3.0E-06 GGGGGAAAAACAAAT 15 V_ARID5A_04_M02840 TRANSFAC + 115047984 115048000 5.0E-06 TTTTAAATACCGGAGAA 17 V_VDRRXR_01_M01202 TRANSFAC + 115044640 115044654 8.0E-06 ATGTCAAAAGGTTCA 15 V_PAX4_04_M00380 TRANSFAC - 115044995 115045024 5.0E-06 AAGAAATATCTCCAAATCCTTCTTCATGTG 30 V_SMAD1_01_M01590 TRANSFAC + 115046591 115046602 0.0E+00 AAAAACAAAAAA 12 V_SPI1_02_M02043 TRANSFAC + 115044844 115044853 8.0E-06 AAAGGAAATA 10 V_PAX6_01_M00097 TRANSFAC + 115046271 115046291 3.0E-06 TGTGTTCACGCCTCAGTGATT 21 V_NANOG_02_M01247 TRANSFAC + 115046587 115046606 0.0E+00 TTAAAAAAACAAAAAAATTA 20 V_T3RALPHA_Q6_M01724 TRANSFAC + 115046528 115046538 1.0E-06 CTTGAGGTCAG 11 V_OCT4_01_M01125 TRANSFAC - 115047797 115047811 2.0E-06 ATTTTTCATGTAAAC 15 V_TCF11_01_M00285 TRANSFAC - 115051026 115051038 0.0E+00 GTCATTTTTTTTT 13 V_HSF1_Q6_01_M02017 TRANSFAC - 115051811 115051824 5.0E-06 CTATCTTCTGGAAT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.