Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

IREB2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3658 iron-responsive element binding protein 2 chr15 + 78725517 - 78731017 78730517 Transcription Factor Binding Sites   Download all TFBS in the IREB2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RXRG_nuclearreceptor_full_dimeric_14_2 SELEX - 78730285 78730298 5.0E-06 GGGGTCATGAATTC 14 NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 78730129 78730137 3.0E-06 CCACTTGAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 78727205 78727217 1.0E-06 ACAAACAAAAACA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 78731309 78731321 3.0E-06 GAAAACATAAGCA 13 SOX10_HMG_full_dimeric_16_1 SELEX + 78731342 78731357 2.0E-06 AACAATGTTGAGGGTC 16 SOX9_HMG_full_dimeric_16_1 SELEX + 78731342 78731357 3.0E-06 AACAATGTTGAGGGTC 16 IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 78727282 78727293 9.0E-06 TTACACAACAAA 12 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX + 78730285 78730298 4.0E-06 GAATTCATGACCCC 14 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX - 78730285 78730298 5.0E-06 GGGGTCATGAATTC 14 SOX8_HMG_DBD_dimeric_16_1 SELEX + 78731342 78731357 1.0E-06 AACAATGTTGAGGGTC 16 HLF_bZIP_full_dimeric_12_1 SELEX + 78727280 78727291 7.0E-06 AATTACACAACA 12 EWSR1-FLI1_MA0149.1 JASPAR - 78730560 78730577 0.0E+00 GGAAAGAAGGAAGCAGGC 18 EWSR1-FLI1_MA0149.1 JASPAR - 78730564 78730581 0.0E+00 GGGAGGAAAGAAGGAAGC 18 EWSR1-FLI1_MA0149.1 JASPAR - 78730568 78730585 1.0E-06 GCAAGGGAGGAAAGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 78730597 78730614 2.0E-06 GGAAGACGGGGAGGAAGA 18 NFIX_NFI_full_dimeric_15_2 SELEX + 78726605 78726619 8.0E-06 TTGGAAATGTTCCAT 15 NFIX_NFI_full_dimeric_15_2 SELEX - 78726605 78726619 7.0E-06 ATGGAACATTTCCAA 15 SOX7_HMG_full_dimeric_17_2 SELEX + 78730068 78730084 5.0E-06 GAAAAAATTCATTCATT 17 Sox17_HMG_DBD_dimeric_15_2 SELEX + 78730069 78730083 4.0E-06 AAAAAATTCATTCAT 15 RXRG_nuclearreceptor_DBD_dimeric_14_2 SELEX + 78730285 78730298 8.0E-06 GAATTCATGACCCC 14 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 78731215 78731224 9.0E-06 AATAAATGGT 10 SP4_C2H2_full_monomeric_17_1 SELEX + 78730441 78730457 4.0E-06 TTAGCTCCGCCCCTTCC 17 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 78727280 78727291 4.0E-06 AATTACACAACA 12 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 78727255 78727271 9.0E-06 AGATTGCCTGCATTCCA 17 VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 78730426 78730446 3.0E-06 AGCTAACCAGAAAGCGATTTC 21 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 78730128 78730137 8.0E-06 CCCACTTGAA 10 Foxd3_MA0041.1 JASPAR + 78727248 78727259 7.0E-06 GAATGTTAGATT 12 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 78730183 78730199 5.0E-06 CTTTCCCCTAACTATAA 17 SOX18_HMG_full_dimeric_15_3 SELEX + 78730069 78730083 2.0E-06 AAAAAATTCATTCAT 15 TEAD1_TEA_full_dimeric_17_1 SELEX - 78727237 78727253 4.0E-06 ACATTCATTGAATCCCA 17 Sox2_MA0143.1 JASPAR - 78727281 78727295 1.0E-05 TCTTTGTTGTGTAAT 15 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 78727205 78727217 0.0E+00 ACAAACAAAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 78731309 78731321 2.0E-06 GAAAACATAAGCA 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 78727282 78727293 3.0E-06 TTACACAACAAA 12 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX - 78730285 78730298 8.0E-06 GGGGTCATGAATTC 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 78727282 78727293 4.0E-06 TTACACAACAAA 12 V_FOXP1_01_M00987 TRANSFAC + 78727198 78727217 8.0E-06 AAATGGGTGTTTTTGTTTGT 20 V_KLF15_Q2_M01714 TRANSFAC - 78730360 78730373 8.0E-06 CAGTGGGGGCGTTG 14 V_TST1_02_M01316 TRANSFAC + 78730069 78730085 8.0E-06 AAAAAATTCATTCATTC 17 V_TCF3_01_M01594 TRANSFAC - 78727283 78727295 1.0E-06 TCTTTGTTGTGTA 13 V_TCF3_01_M01594 TRANSFAC + 78730461 78730473 2.0E-06 TCTTTGTTTTCCT 13 V_MYB_03_M02883 TRANSFAC - 78730723 78730738 2.0E-06 TTTCCAACTGCCAGAC 16 V_HMGIY_Q3_M01010 TRANSFAC - 78730066 78730080 3.0E-06 AATGAATTTTTTCTT 15 V_FOXD3_01_M00130 TRANSFAC + 78727248 78727259 8.0E-06 GAATGTTAGATT 12 V_LRH1_Q5_01_M02098 TRANSFAC - 78730935 78730945 6.0E-06 GGTCAAGGCCA 11 V_FOXO4_02_M00476 TRANSFAC + 78730461 78730474 5.0E-06 TCTTTGTTTTCCTG 14 V_GATA3_03_M00351 TRANSFAC + 78731387 78731396 5.0E-06 AAAGATCTGA 10 V_STAT_Q6_M00777 TRANSFAC + 78729844 78729856 1.0E-06 GGCATTTCTGGGA 13 V_SOX5_01_M00042 TRANSFAC + 78731340 78731349 7.0E-06 TTAACAATGT 10 V_CBF_02_M01080 TRANSFAC + 78726569 78726584 2.0E-06 ACAGCTGCGGTTATAA 16 V_EGR_Q6_M00807 TRANSFAC - 78730122 78730132 3.0E-06 GTGGGGGCGGC 11 V_NKX25_Q6_M02108 TRANSFAC + 78730128 78730138 1.0E-06 CCCACTTGAAA 11 V_NERF_Q2_M00531 TRANSFAC + 78726590 78726607 3.0E-06 CAACAGGAAGGATCCTTG 18 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 78729880 78729895 9.0E-06 TAAGAAGTGGGTGGGG 16 V_AP4_Q6_01_M00927 TRANSFAC + 78726568 78726576 1.0E-05 AACAGCTGC 9 V_HBP1_Q2_M01661 TRANSFAC + 78727242 78727250 3.0E-06 TTCAATGAA 9 V_GC_01_M00255 TRANSFAC - 78730442 78730455 1.0E-06 AAGGGGCGGAGCTA 14 V_CRX_Q4_M00623 TRANSFAC - 78729804 78729816 0.0E+00 TTTCTAATCTCAC 13 V_TCF3_04_M02816 TRANSFAC + 78727283 78727299 6.0E-06 TACACAACAAAGAATCA 17 V_POU3F2_01_M00463 TRANSFAC - 78730066 78730079 1.0E-06 ATGAATTTTTTCTT 14 V_RXRA_03_M02791 TRANSFAC + 78730287 78730303 7.0E-06 ATTCATGACCCCAATAG 17 V_SOX8_04_M02912 TRANSFAC - 78727240 78727253 8.0E-06 ACATTCATTGAATC 14 V_KROX_Q6_M00982 TRANSFAC + 78730389 78730402 9.0E-06 TCCGCCCCCGCTCG 14 V_SP1_Q6_M00196 TRANSFAC - 78730443 78730455 7.0E-06 AAGGGGCGGAGCT 13 V_EGR1_Q6_M01873 TRANSFAC - 78730390 78730399 4.0E-06 GCGGGGGCGG 10 V_STAT5A_02_M00460 TRANSFAC - 78729834 78729857 1.0E-05 CTCCCAGAAATGCCTTTAGCCAAG 24 V_SOX_Q6_M01014 TRANSFAC + 78730460 78730472 7.0E-06 TTCTTTGTTTTCC 13 V_HBP1_03_M02762 TRANSFAC + 78727239 78727254 1.0E-06 GGATTCAATGAATGTT 16 V_HBP1_03_M02762 TRANSFAC - 78730071 78730086 0.0E+00 TGAATGAATGAATTTT 16 V_HBP1_03_M02762 TRANSFAC - 78730075 78730090 0.0E+00 CTGTTGAATGAATGAA 16 V_TCF7_03_M02817 TRANSFAC + 78727283 78727299 7.0E-06 TACACAACAAAGAATCA 17 V_PAX8_01_M00717 TRANSFAC - 78730078 78730092 9.0E-06 AACTGTTGAATGAAT 15 V_SOX11_03_M02795 TRANSFAC + 78727283 78727299 4.0E-06 TACACAACAAAGAATCA 17 V_SOX11_03_M02795 TRANSFAC - 78730457 78730473 2.0E-06 AGGAAAACAAAGAAAGG 17 V_MZF1_02_M00084 TRANSFAC + 78730186 78730198 2.0E-06 TAGTTAGGGGAAA 13 V_FOXO1_Q5_M01216 TRANSFAC - 78730463 78730471 5.0E-06 GAAAACAAA 9 V_SOX17_04_M02904 TRANSFAC - 78727241 78727257 4.0E-06 TCTAACATTCATTGAAT 17 V_CIZ_01_M00734 TRANSFAC + 78730068 78730076 5.0E-06 GAAAAAATT 9 V_RARA_04_M02891 TRANSFAC - 78730288 78730303 9.0E-06 CTATTGGGGTCATGAA 16 V_FAC1_01_M00456 TRANSFAC - 78727201 78727214 9.0E-06 AACAAAAACACCCA 14 V_TAL1_01_M01591 TRANSFAC + 78730764 78730776 9.0E-06 CTTGCTTTTCTCG 13 V_BRN4_01_M01473 TRANSFAC - 78730068 78730084 7.0E-06 AATGAATGAATTTTTTC 17 V_SMAD4_04_M02898 TRANSFAC + 78731420 78731436 8.0E-06 GCCTCCCCGCCACTGCC 17 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 78730891 78730899 8.0E-06 GAGGGTGGG 9 V_FOXL1_02_M02857 TRANSFAC + 78727281 78727296 7.0E-06 ATTACACAACAAAGAA 16 V_FOXJ3_06_M02855 TRANSFAC + 78727280 78727296 4.0E-06 AATTACACAACAAAGAA 17 V_PLAG1_01_M01778 TRANSFAC - 78730365 78730380 4.0E-06 GAGGCTCCAGTGGGGG 16 V_DMRT7_01_M01151 TRANSFAC - 78727287 78727300 5.0E-06 TTGATTCTTTGTTG 14 V_BBX_03_M02739 TRANSFAC + 78730076 78730090 7.0E-06 TCATTCATTCAACAG 15 V_EGR1_06_M02744 TRANSFAC + 78730389 78730402 2.0E-06 TCCGCCCCCGCTCG 14 V_TCFAP2A_03_M02819 TRANSFAC - 78730650 78730664 9.0E-06 TATCCCTCCGGGGAG 15 V_SOX2_01_M02246 TRANSFAC - 78727281 78727295 1.0E-05 TCTTTGTTGTGTAAT 15 V_SRF_06_M02916 TRANSFAC + 78730064 78730080 9.0E-06 GTAAGAAAAAATTCATT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 78730560 78730577 0.0E+00 GGAAAGAAGGAAGCAGGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 78730564 78730581 0.0E+00 GGGAGGAAAGAAGGAAGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 78730568 78730585 1.0E-06 GCAAGGGAGGAAAGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 78730597 78730614 2.0E-06 GGAAGACGGGGAGGAAGA 18 V_SOX1_03_M02802 TRANSFAC + 78730069 78730084 2.0E-06 AAAAAATTCATTCATT 16 V_MEF2_01_M00006 TRANSFAC - 78731396 78731411 5.0E-06 GGTTGAAAAGAACCTT 16 V_ARP1_01_M00155 TRANSFAC + 78730284 78730299 4.0E-06 CGAATTCATGACCCCA 16 V_CEBP_Q2_01_M00912 TRANSFAC + 78727281 78727292 8.0E-06 ATTACACAACAA 12 V_SP1_Q4_01_M00932 TRANSFAC - 78730443 78730455 5.0E-06 AAGGGGCGGAGCT 13 V_TCF11MAFG_01_M00284 TRANSFAC + 78731369 78731390 3.0E-06 CCGCTATGAGTCTGCACAAAAG 22 V_TCF11MAFG_01_M00284 TRANSFAC + 78731481 78731502 2.0E-06 GATCTTTGACTTAGTAGTTCAG 22 V_TCF3_05_M02920 TRANSFAC + 78730061 78730075 5.0E-06 AGGGTAAGAAAAAAT 15 V_SMAD1_01_M01590 TRANSFAC - 78730460 78730471 3.0E-06 GAAAACAAAGAA 12 V_SOX9_Q4_M01284 TRANSFAC - 78730459 78730469 3.0E-06 AAACAAAGAAA 11 V_CEBPA_Q6_M01866 TRANSFAC - 78727280 78727292 6.0E-06 TTGTTGTGTAATT 13 V_NANOG_02_M01247 TRANSFAC + 78727281 78727300 1.0E-06 ATTACACAACAAAGAATCAA 20 V_NANOG_02_M01247 TRANSFAC - 78730456 78730475 3.0E-06 ACAGGAAAACAAAGAAAGGG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.