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TRNT1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51095 tRNA nucleotidyl transferase, CCA-adding, 1 chr3 + 3163599 - 3169099 3168599 Transcription Factor Binding Sites   Download all TFBS in the TRNT1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 3168229 3168246 2.0E-06 TCGGTAAATGTTAACTTA 18 RXRG_nuclearreceptor_full_dimeric_14_2 SELEX + 3168840 3168853 9.0E-06 GAGGTCGTGTCCCC 14 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 3168272 3168280 9.0E-06 TTAATAAAA 9 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 3168394 3168402 9.0E-06 GTAATTAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 3168394 3168403 7.0E-06 GTAATTAAAC 10 GABPA_MA0062.2 JASPAR + 3168627 3168637 4.0E-06 CCGGAAGTGCG 11 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 3168301 3168312 7.0E-06 TGGCAGCTGTCT 12 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 3168538 3168548 1.0E-05 GCCCCGCCCCC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 3168103 3168114 4.0E-06 TAAGAAAATAAA 12 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX + 3168840 3168853 8.0E-06 GAGGTCGTGTCCCC 14 ELF4_ETS_full_monomeric_12_1 SELEX + 3168624 3168635 7.0E-06 AGCCCGGAAGTG 12 HINFP1_C2H2_full_dimeric_20_1 SELEX + 3168518 3168537 1.0E-05 GCGGAAGCCCTTCGGTCCGG 20 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 3168103 3168113 6.0E-06 TAAGAAAATAA 11 PDX1_homeodomain_DBD_monomeric_8_1 SELEX + 3168394 3168401 5.0E-06 GTAATTAA 8 ZNF232_C2H2_full_monomeric_19_1 SELEX + 3168170 3168188 0.0E+00 CTGTCAACTGTGGACTTAA 19 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 3168603 3168614 2.0E-06 GGTGACGTCACC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 3168603 3168614 2.0E-06 GGTGACGTCACC 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 3168301 3168312 7.0E-06 AGACAGCTGCCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 3168301 3168312 1.0E-05 TGGCAGCTGTCT 12 EGR1_C2H2_full_monomeric_14_1 SELEX + 3168540 3168553 2.0E-06 CCCGCCCCCGCACT 14 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 3168603 3168614 6.0E-06 GGTGACGTCACC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 3168603 3168614 6.0E-06 GGTGACGTCACC 12 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 3168231 3168244 1.0E-06 AGTTAACATTTACC 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 3168231 3168244 1.0E-05 GGTAAATGTTAACT 14 JDP2_bZIP_full_dimeric_12_1 SELEX + 3168603 3168614 3.0E-06 GGTGACGTCACC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 3168603 3168614 3.0E-06 GGTGACGTCACC 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 3168539 3168554 2.0E-06 CCCCGCCCCCGCACTC 16 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX + 3168394 3168401 5.0E-06 GTAATTAA 8 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 3168272 3168281 8.0E-06 GTTAATAAAA 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 3168231 3168244 1.0E-06 AGTTAACATTTACC 14 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 3168394 3168402 7.0E-06 GTAATTAAA 9 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX + 3168393 3168402 1.0E-05 CGTAATTAAA 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 3168602 3168615 3.0E-06 TGGTGACGTCACCG 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 3168602 3168615 2.0E-06 CGGTGACGTCACCA 14 EGR2_C2H2_full_monomeric_15_1 SELEX + 3168539 3168553 7.0E-06 CCCCGCCCCCGCACT 15 SP1_MA0079.2 JASPAR + 3168539 3168548 7.0E-06 CCCCGCCCCC 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 3168393 3168402 9.0E-06 CGTAATTAAA 10 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 3168231 3168244 5.0E-06 AGTTAACATTTACC 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 3168231 3168244 6.0E-06 GGTAAATGTTAACT 14 CREB3_bZIP_full_dimeric_14_1 SELEX + 3168602 3168615 1.0E-06 TGGTGACGTCACCG 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 3168602 3168615 0.0E+00 CGGTGACGTCACCA 14 VAX1_homeodomain_DBD_monomeric_8_1 SELEX - 3168394 3168401 9.0E-06 TTAATTAC 8 Egr3_C2H2_DBD_monomeric_15_1 SELEX + 3168540 3168554 2.0E-06 CCCGCCCCCGCACTC 15 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 3171450 3171466 3.0E-06 TTTCACGTAACAGGTCA 17 PRDM4_C2H2_full_monomeric_13_1 SELEX + 3169429 3169441 8.0E-06 TTTCTAGAACCCC 13 EGR4_C2H2_DBD_monomeric_16_2 SELEX + 3168539 3168554 2.0E-06 CCCCGCCCCCGCACTC 16 GSX2_homeodomain_DBD_monomeric_10_1 SELEX + 3168393 3168402 6.0E-06 CGTAATTAAA 10 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 3171514 3171526 7.0E-06 TAACTACTAACTA 13 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 3168231 3168244 3.0E-06 AGTTAACATTTACC 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 3168231 3168244 6.0E-06 GGTAAATGTTAACT 14 VAX2_homeodomain_DBD_monomeric_8_1 SELEX - 3168394 3168401 5.0E-06 TTAATTAC 8 ELF1_ETS_full_monomeric_12_1 SELEX + 3168624 3168635 3.0E-06 AGCCCGGAAGTG 12 ETS1_ETS_full_dimeric_18_1 SELEX + 3168517 3168534 7.0E-06 GGCGGAAGCCCTTCGGTC 18 GSX1_homeodomain_DBD_monomeric_10_1 SELEX + 3168393 3168402 8.0E-06 CGTAATTAAA 10 HSFY2_HSF_DBD_dimeric_9_1 SELEX + 3168152 3168160 8.0E-06 TTTCGAATG 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 3168271 3168281 1.0E-05 GTTAATAAAAC 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 3168104 3168116 3.0E-06 AAGAAAATAAAAT 13 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 3168602 3168615 1.0E-06 TGGTGACGTCACCG 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 3168602 3168615 1.0E-06 CGGTGACGTCACCA 14 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 3168301 3168312 1.0E-05 TGGCAGCTGTCT 12 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX + 3168840 3168853 4.0E-06 GAGGTCGTGTCCCC 14 Meox2_homeodomain_DBD_monomeric_8_1 SELEX - 3168394 3168401 9.0E-06 TTAATTAC 8 V_HNF3B_01_M00131 TRANSFAC - 3168229 3168243 3.0E-06 GTAAATGTTAACTTA 15 V_TEL1_02_M02070 TRANSFAC + 3168626 3168635 5.0E-06 CCCGGAAGTG 10 V_BCL6_Q3_01_M02085 TRANSFAC + 3169428 3169437 4.0E-06 GTTTCTAGAA 10 V_E2F1_Q3_01_M00938 TRANSFAC - 3168575 3168590 4.0E-06 TTGGCGGCGAATGGGA 16 V_YY1_02_M00069 TRANSFAC - 3169251 3169270 9.0E-06 TTCCTGCCATCTTGCAATCT 20 V_ZFX_01_M01593 TRANSFAC + 3168451 3168466 5.0E-06 CAGCGGGCCTCGGCGG 16 V_HMGIY_Q3_M01010 TRANSFAC - 3168103 3168117 1.0E-05 TATTTTATTTTCTTA 15 V_CREB_Q4_M00178 TRANSFAC + 3168603 3168614 2.0E-06 GGTGACGTCACC 12 V_CREB_Q4_M00178 TRANSFAC - 3168603 3168614 2.0E-06 GGTGACGTCACC 12 V_NERF_01_M01976 TRANSFAC + 3168626 3168635 9.0E-06 CCCGGAAGTG 10 V_HOXA13_02_M01297 TRANSFAC + 3168108 3168116 4.0E-06 AAATAAAAT 9 V_GABP_B_M00341 TRANSFAC + 3168626 3168637 1.0E-06 CCCGGAAGTGCG 12 V_SP1_Q6_01_M00931 TRANSFAC - 3168538 3168547 4.0E-06 GGGGCGGGGC 10 V_CREB_Q4_01_M00917 TRANSFAC - 3168605 3168615 2.0E-06 CGGTGACGTCA 11 V_FOXO3A_Q1_M01137 TRANSFAC + 3168105 3168116 6.0E-06 AGAAAATAAAAT 12 V_YY1_Q6_M00793 TRANSFAC - 3169257 3169265 7.0E-06 GCCATCTTG 9 V_SP1_03_M02281 TRANSFAC + 3168539 3168548 7.0E-06 CCCCGCCCCC 10 V_JUNDM2_03_M02772 TRANSFAC + 3168601 3168616 1.0E-06 TTGGTGACGTCACCGC 16 V_JUNDM2_03_M02772 TRANSFAC - 3168601 3168616 1.0E-06 GCGGTGACGTCACCAA 16 V_OCTAMER_02_M01477 TRANSFAC + 3171426 3171442 9.0E-06 CTAACTTAATGAGTACG 17 V_NERF_Q2_M00531 TRANSFAC - 3168726 3168743 2.0E-06 CAGCAGGAAGGAAGGGGC 18 V_HOXD13_01_M01404 TRANSFAC - 3168268 3168283 2.0E-06 CTGTTAATAAAACCTA 16 V_ELF2_02_M02054 TRANSFAC + 3168626 3168635 8.0E-06 CCCGGAAGTG 10 V_RPC155_01_M01798 TRANSFAC - 3171535 3171550 3.0E-06 GCGTAAGTTCGAAACC 16 V_ELF4_04_M02850 TRANSFAC + 3168102 3168118 8.0E-06 GTAAGAAAATAAAATAT 17 V_TEF_Q6_M00672 TRANSFAC + 3168085 3168096 3.0E-06 ATGGTTACACAA 12 V_SOX8_04_M02912 TRANSFAC + 3171402 3171415 7.0E-06 CCATTCATTACAGG 14 V_SP1_Q6_M00196 TRANSFAC - 3168537 3168549 1.0E-06 CGGGGGCGGGGCC 13 V_EVI1_01_M00078 TRANSFAC + 3168199 3168214 9.0E-06 AGATTAGAGGAGAGAA 16 V_EGR1_Q6_M01873 TRANSFAC - 3168541 3168550 4.0E-06 GCGGGGGCGG 10 V_GADP_01_M01258 TRANSFAC - 3168624 3168635 5.0E-06 CACTTCCGGGCT 12 V_CREBATF_Q6_M00981 TRANSFAC - 3168605 3168613 9.0E-06 GTGACGTCA 9 V_OCT1_08_M01354 TRANSFAC - 3171428 3171443 9.0E-06 GCGTACTCATTAAGTT 16 V_BBX_04_M02843 TRANSFAC + 3168227 3168243 6.0E-06 GATAAGTTAACATTTAC 17 V_ATF3_Q6_M00513 TRANSFAC + 3168602 3168615 2.0E-06 TGGTGACGTCACCG 14 V_ARID3A_04_M02735 TRANSFAC - 3168268 3168284 1.0E-05 ACTGTTAATAAAACCTA 17 V_TEL1_01_M01993 TRANSFAC + 3168626 3168635 5.0E-06 CCCGGAAGTG 10 V_CREB_Q2_01_M00916 TRANSFAC + 3168603 3168616 1.0E-06 GGTGACGTCACCGC 14 V_NR1B1_Q6_M02110 TRANSFAC - 3171448 3171457 9.0E-06 ACAGGTCAAA 10 V_ELF4_01_M01979 TRANSFAC + 3168626 3168635 4.0E-06 CCCGGAAGTG 10 V_SP4_Q5_M01273 TRANSFAC + 3168538 3168548 1.0E-06 GCCCCGCCCCC 11 V_CREM_Q6_M01820 TRANSFAC - 3168602 3168612 0.0E+00 TGACGTCACCA 11 V_CREM_Q6_M01820 TRANSFAC + 3168605 3168615 1.0E-06 TGACGTCACCG 11 V_VJUN_01_M00036 TRANSFAC + 3168601 3168616 1.0E-06 TTGGTGACGTCACCGC 16 V_VJUN_01_M00036 TRANSFAC - 3168601 3168616 2.0E-06 GCGGTGACGTCACCAA 16 V_MYOD_Q6_02_M02100 TRANSFAC - 3168301 3168309 8.0E-06 CAGCTGTCT 9 V_CREBP1_Q2_M00179 TRANSFAC + 3168603 3168614 1.0E-06 GGTGACGTCACC 12 V_CREBP1_Q2_M00179 TRANSFAC - 3168603 3168614 1.0E-06 GGTGACGTCACC 12 V_IPF1_05_M01255 TRANSFAC - 3171428 3171439 7.0E-06 ACTCATTAAGTT 12 V_ATF1_03_M02738 TRANSFAC + 3168601 3168616 1.0E-06 TTGGTGACGTCACCGC 16 V_ATF1_03_M02738 TRANSFAC - 3168601 3168616 0.0E+00 GCGGTGACGTCACCAA 16 V_BDP1_01_M01796 TRANSFAC + 3171535 3171546 6.0E-06 GGTTTCGAACTT 12 V_CREB_Q2_M00177 TRANSFAC + 3168603 3168614 1.0E-05 GGTGACGTCACC 12 V_CREB_Q2_M00177 TRANSFAC - 3168603 3168614 1.0E-05 GGTGACGTCACC 12 V_ZBTB12_03_M02824 TRANSFAC - 3169427 3169443 6.0E-06 GCGGGGTTCTAGAAACT 17 V_STAT1STAT1_Q3_M01212 TRANSFAC - 3171455 3171467 1.0E-05 TTTTCACGTAACA 13 V_EGR1_06_M02744 TRANSFAC + 3168540 3168553 0.0E+00 CCCGCCCCCGCACT 14 V_SRF_06_M02916 TRANSFAC + 3168101 3168117 9.0E-06 GGTAAGAAAATAAAATA 17 V_SRF_06_M02916 TRANSFAC + 3168102 3168118 0.0E+00 GTAAGAAAATAAAATAT 17 V_POU6F1_03_M01479 TRANSFAC + 3171427 3171443 9.0E-06 TAACTTAATGAGTACGC 17 V_CREB_02_M00113 TRANSFAC + 3168601 3168612 0.0E+00 TTGGTGACGTCA 12 V_ELF_02_M02053 TRANSFAC + 3168626 3168635 1.0E-05 CCCGGAAGTG 10 V_PAX1_B_M00326 TRANSFAC - 3169210 3169227 1.0E-05 GCCTTCCCTTCTACATAT 18 V_HOXA7_03_M01394 TRANSFAC + 3168391 3168406 5.0E-06 GGCGTAATTAAACGAA 16 V_SP1_Q2_01_M00933 TRANSFAC + 3168539 3168548 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 3168538 3168551 5.0E-06 TGCGGGGGCGGGGC 14 V_HOXA10_01_M01464 TRANSFAC + 3168391 3168406 7.0E-06 GGCGTAATTAAACGAA 16 V_SP1_Q4_01_M00932 TRANSFAC - 3168537 3168549 1.0E-06 CGGGGGCGGGGCC 13 V_GFI1_Q6_01_M02010 TRANSFAC - 3169240 3169249 2.0E-06 CTCTGATTTC 10 V_HOXD10_01_M01375 TRANSFAC + 3168104 3168120 3.0E-06 AAGAAAATAAAATATGC 17 V_HOXD10_01_M01375 TRANSFAC - 3168267 3168283 7.0E-06 CTGTTAATAAAACCTAC 17 V_ATF_B_M00338 TRANSFAC + 3168604 3168615 4.0E-06 GTGACGTCACCG 12 V_GLIS2_04_M02863 TRANSFAC - 3168271 3168284 7.0E-06 ACTGTTAATAAAAC 14

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