Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PPM1H Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57460 protein phosphatase, Mg2+/Mn2+ dependent, 1H chr12 - 63328165 - 63333665 63328665 Transcription Factor Binding Sites   Download all TFBS in the PPM1H promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RXRG_nuclearreceptor_full_dimeric_14_2 SELEX + 63329013 63329026 4.0E-06 GGGATCGTGACCTC 14 MESP1_bHLH_DBD_dimeric_10_1 SELEX - 63329097 63329106 2.0E-06 AACACCTGTA 10 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX + 63329013 63329026 5.0E-06 GGGATCGTGACCTC 14 RXRA_nuclearreceptor_full_dimeric_14_2 SELEX - 63329013 63329026 8.0E-06 GAGGTCACGATCCC 14 TCF4_bHLH_full_dimeric_10_1 SELEX - 63329097 63329106 1.0E-06 AACACCTGTA 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX - 63329097 63329106 2.0E-06 AACACCTGTA 10 SP1_MA0079.2 JASPAR + 63328827 63328836 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 63329029 63329038 3.0E-06 CCCCTCCCCC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 63328924 63328933 3.0E-06 ATCACATGAC 10 MZF1_5-13_MA0057.1 JASPAR + 63328394 63328403 1.0E-05 GTAGGGGAAA 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 63328924 63328933 2.0E-06 ATCACATGAC 10 NHLH1_bHLH_full_dimeric_10_1 SELEX + 63328426 63328435 9.0E-06 CGCAGCTGCC 10 TCF3_bHLH_DBD_dimeric_10_1 SELEX - 63329097 63329106 1.0E-06 AACACCTGTA 10 Zfx_MA0146.1 JASPAR + 63328142 63328155 0.0E+00 CCCGCCGAGGCCTG 14 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX + 63329013 63329026 6.0E-06 GGGATCGTGACCTC 14 RXRA_nuclearreceptor_DBD_dimeric_14_2 SELEX - 63329013 63329026 4.0E-06 GAGGTCACGATCCC 14 V_ZFX_01_M01593 TRANSFAC - 63328143 63328158 0.0E+00 GTCCAGGCCTCGGCGG 16 V_NFAT3_Q3_M01734 TRANSFAC + 63324952 63324961 4.0E-06 AATTTTTCCT 10 V_MAF_Q6_M00648 TRANSFAC + 63328109 63328124 8.0E-06 AAGAGGGAAATGGCCA 16 V_SP1_03_M02281 TRANSFAC + 63328827 63328836 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 63329029 63329038 3.0E-06 CCCCTCCCCC 10 V_BACH1_01_M00495 TRANSFAC - 63324978 63324992 6.0E-06 AAAGTGAGTCACGTT 15 V_ZNF219_01_M01122 TRANSFAC - 63329068 63329079 7.0E-06 CGCCCCCATCCC 12 V_GC_01_M00255 TRANSFAC - 63328976 63328989 9.0E-06 CAGGGGAGGGGCTG 14 V_HELIOSA_02_M01004 TRANSFAC + 63327273 63327283 6.0E-06 TAAAGGAAAAG 11 V_ZBED6_01_M01598 TRANSFAC - 63328873 63328884 8.0E-06 CGAGCTCGCCGG 12 V_SP4_03_M02810 TRANSFAC + 63328825 63328841 8.0E-06 TTCCCCGCCCCCTGCGC 17 V_ZBP89_Q4_M01816 TRANSFAC - 63329028 63329037 4.0E-06 CCCTCCCCCA 10 V_E47_02_M00071 TRANSFAC + 63329094 63329109 5.0E-06 CGGTACAGGTGTTAGC 16 V_MAZ_Q6_01_M02023 TRANSFAC + 63329061 63329074 9.0E-06 GGCGGAGGGGATGG 14 V_ASCL2_03_M02737 TRANSFAC + 63328423 63328439 5.0E-06 CTCCGCAGCTGCCGCCG 17 V_SP1SP3_Q4_M01219 TRANSFAC + 63328829 63328839 8.0E-06 CCGCCCCCTGC 11 V_STAT4_Q5_M02117 TRANSFAC + 63327272 63327281 2.0E-06 TTAAAGGAAA 10 V_HIC1_02_M01072 TRANSFAC - 63329123 63329137 2.0E-06 CCCGGCTGCCCGGCT 15 V_BLIMP1_Q6_M01066 TRANSFAC + 63328107 63328122 8.0E-06 AGAAGAGGGAAATGGC 16 V_SP4_Q5_M01273 TRANSFAC + 63328826 63328836 9.0E-06 TCCCCGCCCCC 11 V_AREB6_02_M00413 TRANSFAC - 63329096 63329107 1.0E-06 TAACACCTGTAC 12 V_TFEB_01_M01768 TRANSFAC + 63328924 63328933 7.0E-06 GTCATGTGAT 10 V_TFEB_01_M01768 TRANSFAC - 63328924 63328933 7.0E-06 ATCACATGAC 10 V_ZFP281_01_M01597 TRANSFAC + 63329028 63329038 1.0E-06 TGGGGGAGGGG 11 V_PAX4_02_M00377 TRANSFAC - 63324949 63324959 9.0E-06 GAAAAATTGAC 11 V_SP1_Q2_01_M00933 TRANSFAC + 63328827 63328836 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 63328978 63328991 2.0E-06 GGCAGGGGAGGGGC 14 V_TFE_Q6_M01029 TRANSFAC + 63328925 63328932 1.0E-05 TCATGTGA 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.