Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PAX1 target genes for motif:
PAX1_PAX_DBD_monomeric_17_1

The PAX1_PAX_DBD_monomeric_17_1 motif was discovered for PAX1 and was found in the SELEX repository.

PAX1 motif sequence logo


PAX1 motif positions


 

PAX1 target gene list


Download all PAX1 TF binding sites
GeneEntrez# of SitesStrandChromosomePromoter LocationTSS
ATXN1L 342371 1 chr16 + 71874893-71880393 71879893
G0S2 50486 1 chr1 + 209843669-209849169 209848669
KIF20B 9585 1 chr10 + 91456366-91461866 91461366
PLEKHG5 57449 1 chr1 - 6579621-6585121 6580121
CNN3 1266 1 chr1 - 95392235-95397735 95392735
THAP3 90326 1 chr1 + 6679924-6685709 6685209
PTGS2 5743 1 chr1 - 186649059-186654559 186649559
DAO 1610 1 chr12 + 109268856-109274356 109273856
SND1 27044 1 chr7 + 127287201-127292701 127292201
GPHN 10243 1 chr14 + 66969124-66974624 66974124
FAM131C 348487 1 chr1 - 16399627-16405127 16400127
~ 283710 1 chr15 - 31522550-31528050 31523050
FKBP10 60681 2 chr17 + 39963961-39969461 39968961
~ 100526842 1 chr18 - 47017454-47023935 47017954
GLYCTK 132158 1 chr3 + 52316835-52322335 52321835
GPR56 9289 1 chr16 + 57648909-57654409 57653909
RPUSD3 285367 1 chr3 - 9885202-9890702 9885702
ORAI2 80228 1 chr7 + 102068976-102074476 102073976
REV3L 5980 1 chr6 - 111803914-111809414 111804414
AKIP1 56672 1 chr11 + 8927700-8933200 8932700
NAP1L1 4673 1 chr12 - 76478238-76483738 76478738
MARK3 4140 1 chr14 + 103846700-103852200 103851700
MAT1A 4143 1 chr10 - 82048934-82054434 82049434
CD27 939 1 chr12 + 6549050-6554550 6554050
DMRTA2 63950 1 chr1 - 50888619-50894119 50889119
FBXO3 26273 1 chr11 - 33795571-33801071 33796071
CPLX1 10815 1 chr4 - 819445-824945 819945
FAM98A 25940 1 chr2 - 33823862-33829362 33824362
NGLY1 55768 1 chr3 - 25831030-25836530 25831530
ANKS1A 23294 1 chr6 + 34852037-34857537 34857037
CRTAM 56253 1 chr11 + 122704254-122709754 122709254
LRRC14 9684 1 chr8 + 145738348-145743848 145743348
TNFSF9 8744 1 chr19 + 6526009-6531509 6531009
CAPN7 23473 1 chr3 + 15242732-15248232 15247732
LRRC27 80313 1 chr10 + 134140613-134146240 134145740
KCNK10 54207 1 chr14 - 88789093-88798256 88789593
CD248 57124 1 chr11 - 66084015-66089515 66084515
ZNF673 55634 1 chrX + 46301623-46307123 46306623
CIRBP 1153 1 chr19 + 1264266-1269766 1269266
SAFB2 9667 1 chr19 - 5622438-5627938 5622938
TNKS2 80351 1 chr10 + 93553150-93558650 93558150
FLVCR1 28982 1 chr1 + 213026596-213032096 213031596
SLC12A9 56996 1 chr7 + 100445340-100450840 100450340
SPCS2 9789 1 chr11 + 74655291-74660791 74660291
HEXB 3074 1 chr5 + 73975968-73981468 73980968
EFCAB13 124989 1 chr17 + 45396326-45401826 45401326
EIF5B 9669 1 chr2 + 99948833-99954333 99953833
NR2C2AP 126382 1 chr19 - 19313738-19319238 19314238
APOPT1 84334 1 chr14 + 104024298-104029798 104029298
MAPK3 5595 1 chr16 - 30134130-30139630 30134630
KLHL21 9903 1 chr1 - 6662429-6667929 6662929
TXNDC9 10190 1 chr2 - 99952360-99957860 99952860
SRGAP3 9901 1 chr3 - 9290869-9296369 9291369
CBR4 84869 1 chr4 - 169930968-169936468 169931468
COL1A1 1277 1 chr17 - 48278500-48284000 48279000
C18orf32 497661 1 chr18 - 47013144-47018644 47013644
ATP6V0A1 535 1 chr17 + 40605861-40611361 40610861
LIPT1 51601 1 chr2 + 99766417-99772036 99771536
RARA 5914 1 chr17 + 38460422-38465922 38465422
KRTAP2-1 81872 1 chr17 - 39203068-39208568 39203568
AADAT 51166 1 chr4 - 171010683-171016372 171011183
ADORA2B 136 1 chr17 + 15843230-15848730 15848230
~ 114569 1 chr8 + 120215609-120221109 120220609
TAPBPL 55080 1 chr12 + 6556176-6561676 6561176
GPN2 54707 1 chr1 - 27216369-27221869 27216869
SFXN2 118980 1 chr10 + 104469297-104474797 104474297
INO80C 125476 1 chr18 - 33077455-33082955 33077955
DHRS13 147015 1 chr17 - 27229589-27235089 27230089
DZIP1 22873 1 chr13 - 96296460-96301960 96296960
MMP16 4325 1 chr8 - 89339217-89344717 89339717
USP7 7874 1 chr16 - 9056841-9062341 9057341
PLCH2 9651 1 chr1 + 2402753-2408253 2407753
MYO10 4651 1 chr5 - 16935885-16941385 16936385
QSOX1 5768 1 chr1 + 180118967-180124467 180123967
PPM1A 5494 1 chr14 + 60707469-60716465 60715965
SLC12A6 9990 1 chr15 - 34628545-34635265 34629045
~ 147646 1 chr19 - 51893328-51898828 51893828
TRAP1 10131 1 chr16 - 3767098-3772598 3767598
LAGE3 8270 1 chrX - 153707096-153712596 153707596
ICAM2 3384 1 chr17 - 62097494-62102994 62097994
PTPDC1 138639 1 chr9 + 96788075-96793590 96793090
TMEM201 199953 1 chr1 + 9643931-9649431 9648931
ST6GALNAC3 256435 1 chr1 + 76535388-76540888 76540388
ANKRD26 22852 1 chr10 - 27388927-27394427 27389427
PKM 5315 1 chr15 - 72521563-72528727 72522063
TICAM2 353376 1 chr5 - 114937676-114943176 114938176
WBP1L 54838 1 chr10 + 104498726-104504226 104503726
CDCA4 55038 1 chr14 - 105486925-105492425 105487425
TCTN1 79600 1 chr12 + 111046831-111052411 111051911
C6orf223 221416 1 chr6 + 43963336-43968836 43968336
YWHAZ 7534 1 chr8 - 101962299-101970623 101962799
TRMT61B 55006 1 chr2 - 29092675-29098175 29093175
ITM2B 9445 1 chr13 + 48802273-48807773 48807273
NCAPG2 54892 1 chr7 - 158497020-158502520 158497520
EXOSC6 118460 1 chr16 - 70285333-70290833 70285833
ALKBH5 54890 1 chr17 + 18081866-18087366 18086866
BAG5 9529 1 chr14 - 104028155-104034151 104028655
KISS1 3814 1 chr1 - 204165119-204170619 204165619
GPRIN2 9721 1 chr10 + 46988545-46994045 46993545
LFNG 3955 1 chr7 + 2547162-2557996 2557496
GPX4 2879 1 chr19 + 1098935-1105148 1104648
PUS1 80324 1 chr12 + 132408744-132414312 132413812
PGS1 9489 1 chr17 + 76369734-76375234 76374734
TFAP2A 7020 1 chr6 - 10414970-10424797 10415470
HRAS 3265 1 chr11 - 535050-540550 535550
GAB2 9846 1 chr11 - 78128368-78133868 78128868
CRELD2 79174 1 chr22 + 50307282-50312782 50312282
NIPAL3 57185 1 chr1 + 24737244-24742744 24742244
ST8SIA4 7903 1 chr5 - 100238470-100243987 100238970
PCSK1 5122 1 chr5 - 95767363-95773985 95767863
SLFN12L 100506736 1 chr17 - 33814258-33819758 33814758
RNF149 284996 1 chr2 - 101924678-101930178 101925178
LTBR 4055 1 chr12 + 6479533-6485033 6484533
FASTKD2 22868 1 chr2 + 207625111-207630611 207630111
LTBP2 4053 1 chr14 - 75078534-75084034 75079034
LEPREL4 10609 2 chr17 - 39967951-39973451 39968451
DUSP5 1847 1 chr10 + 112252624-112258124 112257624
RAB3A 5864 1 chr19 - 18314374-18319874 18314874
CCNI 10983 1 chr4 - 77996625-78002125 77997125
FAM170B 170370 1 chr10 - 50341565-50347065 50342065
SEC61A1 29927 1 chr3 + 127766211-127771711 127771211
HK2 3099 1 chr2 + 75054781-75060281 75059781
SNX3 8724 1 chr6 - 108581964-108587464 108582464
MAGEB2 4113 1 chrX + 30228674-30234174 30233674
BDNF 627 1 chr11 - 27740794-27748605 27741294
TMEM19 55266 1 chr12 + 72074877-72080377 72079877
CCDC147 159686 1 chr10 + 106108521-106114021 106113521
HOXB8 3218 1 chr17 - 46691801-46697301 46692301
MARCH3 115123 1 chr5 - 126365940-126371440 126366440
SEC61G 23480 1 chr7 - 54826439-54831939 54826939
DIO2 1734 1 chr14 - 80696897-80702397 80697397
ACTB 60 1 chr7 - 5569732-5575232 5570232
HIST1H2BO 8348 1 chr6 + 27856202-27861702 27861202
KDM3A 55818 1 chr2 + 86663270-86669083 86668583
MYL4 4635 1 chr17 + 45281427-45287213 45286713
B3GALTL 145173 1 chr13 + 31769111-31774611 31774111
RD3L 647286 1 chr14 - 104408145-104413645 104408645
NEGR1 257194 1 chr1 - 72747777-72753277 72748277
THOC6 79228 1 chr16 + 3069031-3074531 3074031
HOXB7 3217 1 chr17 - 46687883-46693383 46688383
LYN 4067 1 chr8 + 56787385-56792885 56792385
EEF2 1938 1 chr19 - 3984961-3990461 3985461
C10orf95 79946 1 chr10 - 104210800-104216300 104211300
ST5 6764 1 chr11 - 8931998-8937498 8932498
RTN4IP1 84816 1 chr6 - 107076873-107082373 107077373
~ 9401 1 chr8 - 145742710-145748210 145743210
SPEN 23013 1 chr1 + 16169358-16174858 16174358
~ 8356 1 chr6 - 27858070-27863570 27858570
VCL 7414 1 chr10 + 75752871-75758371 75757871
IPCEF1 26034 1 chr6 - 154677400-154682900 154677900
ARL3 403 1 chr10 - 104473690-104479190 104474190
CIC 23152 1 chr19 + 42783816-42789316 42788816
SLC9A8 23315 1 chr20 + 48424249-48429749 48429249
RFK 55312 1 chr9 - 79008944-79014444 79009444
CABIN1 23523 1 chr22 + 24402764-24408319 24407819
QRSL1 55278 1 chr6 + 107072440-107077940 107077440
IFT88 8100 1 chr13 + 21136207-21141707 21141207
KCNK12 56660 1 chr2 - 47796970-47802470 47797470
ZNF347 84671 1 chr19 - 53661813-53667322 53662313
SESN3 143686 1 chr11 - 94963746-94970705 94964246
TTLL13 440307 1 chr15 + 90787763-90793263 90792763
ALG12 79087 1 chr22 - 50311606-50317106 50312106
NUDT8 254552 1 chr11 - 67396908-67402408 67397408
~ 728635 1 chr14 + 24500709-24506209 24505709
TAF11 6882 1 chr6 - 34855348-34860848 34855848
RHBDL1 9028 1 chr16 + 721074-726574 726074
AGAP3 116988 1 chr7 + 150778825-150784325 150783825
SLC15A4 121260 1 chr12 - 129308041-129313541 129308541
AGAP2 116986 1 chr12 - 58131529-58140944 58132029
NYX 60506 1 chrX + 41301712-41307212 41306712
JUND 3727 1 chr19 - 18391932-18397432 18392432
SLK 9748 1 chr10 + 105722469-105727969 105727469
FADS3 3995 1 chr11 - 61658506-61664006 61659006
TALDO1 6888 1 chr11 + 742431-747931 747431
GMEB2 26205 1 chr20 - 62257881-62263381 62258381
CSRP2 1466 1 chr12 - 77272299-77277799 77272799
B3GNT3 10331 1 chr19 + 17900918-17906418 17905918
RNF187 149603 2 chr1 + 228670067-228675567 228675067
TXNDC11 51061 1 chr16 - 11836148-11841648 11836648
SAFB 6294 1 chr19 + 5618045-5623545 5623045
NQO2 4835 1 chr6 + 2995066-3000566 3000066
XRRA1 143570 1 chr11 - 74659732-74665232 74660232
FASTK 10922 1 chr7 - 150777470-150782970 150777970
WDFY3 23001 1 chr4 - 85887044-85892544 85887544
SPTLC3 55304 1 chr20 + 12984626-12990126 12989626
HFE2 148738 1 chr1 + 145408190-145413690 145413190
EIF3I 8668 1 chr1 + 32682970-32688470 32687970
RBM23 55147 1 chr14 - 23387896-23393396 23388396
INO80E 283899 1 chr16 + 30002530-30008030 30007530
TNFRSF12A 51330 1 chr16 + 3065312-3070812 3070312
RPL17 6139 1 chr18 - 47018334-47023935 47018834
HCFC1R1 54985 1 chr16 - 3073787-3079287 3074287
MYO1G 64005 1 chr7 - 45018204-45023704 45018704
CENPM 79019 1 chr22 - 42342648-42348148 42343148
STUB1 10273 1 chr16 + 725114-730614 730114
C11orf9 745 1 chr11 + 61515120-61523360 61522860
SNX8 29886 1 chr7 - 2353599-2359099 2354099
NAALAD2 10003 1 chr11 + 89862817-89868317 89867817
MYADM 91663 1 chr19 + 54364610-54373280 54372780
TMUB1 83590 1 chr7 - 150779913-150785620 150780413
KCTD5 54442 1 chr16 + 2727494-2732994 2732494
LY86 9450 1 chr6 + 6583933-6589433 6588933
IL36G 56300 1 chr2 + 113730605-113736105 113735605
TRAF4 9618 1 chr17 + 27066022-27071522 27071022
GPM6B 2824 1 chrX - 13956331-13961831 13956831
TCN2 6948 1 chr22 + 30998069-31003569 31003069
MDH1B 130752 1 chr2 - 207629550-207635050 207630050
FUT11 170384 1 chr10 + 75527048-75532548 75532048
SNRPA1 6627 1 chr15 - 101834960-101840460 101835460
SHISA7 729956 1 chr19 - 55953730-55959230 55954230
HENMT1 113802 1 chr1 - 109203244-109209148 109203744
PRSS3 5646 1 chr9 + 33745463-33751318 33750818
FJX1 24147 1 chr11 + 35634734-35640234 35639734
NCOA6 23054 1 chr20 - 33412933-33418433 33413433
FAM124A 220108 1 chr13 + 51791469-51796969 51796469
DNASE2B 58511 1 chr1 + 84859214-84879033 0
POU2AF1 5450 1 chr11 - 111249657-111255157 111250157
PTAFR 5724 1 chr1 - 28519947-28525447 28520447
HNRNPF 3185 1 chr10 - 43902799-43909696 43903299
TMEM234 56063 1 chr1 - 32687426-32692926 32687926
KDM5B 10765 1 chr1 - 202777049-202782549 202777549
FOXRED1 55572 1 chr11 + 126133934-126139434 126138934
HNRNPAB 3182 1 chr5 + 177626507-177632007 177631507
TRPV3 162514 1 chr17 - 3460789-3466289 3461289
SYNGR1 9145 1 chr22 + 39740953-39746453 39745953
COL8A1 1295 1 chr3 + 99352439-99357939 99357439
PYROXD2 84795 1 chr10 - 100174478-100179978 100174978
SMAD7 4092 1 chr18 - 46475203-46482081 46475703
METRNL 284207 1 chr17 + 81032566-81038066 81037566
XRCC6BP1 91419 1 chr12 + 58330444-58335944 58335444
ING1 3621 1 chr13 + 111359969-111368283 111367783
AKT2 208 1 chr19 - 40790802-40796302 40791302
LRRC56 115399 1 chr11 + 532521-538021 537521
ZNF567 163081 1 chr19 + 37175301-37180801 37180301
ELOVL7 79993 1 chr5 - 60139601-60145101 60140101
MED27 9442 1 chr9 - 134954774-134960274 134955274
FAM65A 79567 1 chr16 + 67557716-67564039 67563539
HIRIP3 8479 1 chr16 - 30006917-30012417 30007417
TSPAN8 7103 1 chr12 - 71551279-71556779 71551779
SRPR 6734 1 chr11 - 126138377-126143877 126138877
TFEB 7942 1 chr6 - 41701639-41708997 41702139
TSGA10 80705 1 chr2 - 99770687-99776187 99771187
RNF212 285498 1 chr4 - 1106852-1112352 1107352
TAC3 6866 1 chr12 - 57409844-57415344 57410344
HTR2C 3358 1 chrX + 113813550-113819050 113818550
CARHSP1 23589 1 chr16 - 8961748-8967863 8962248
KCNN1 3780 1 chr19 + 18057110-18062610 18062110
LHX6 26468 1 chr9 - 124989365-124996091 124989865
DEFB108B 245911 1 chr11 + 71539245-71544745 71544245
PLXNB1 5364 1 chr3 - 48470372-48476460 48470872
FDX1 2230 1 chr11 + 110295660-110301160 110300660
PNOC 5368 1 chr8 + 28169648-28175148 28174648
ZNF845 91664 1 chr19 + 53832001-53837501 53837001
HOXC4 3221 1 chr12 + 54405641-54411141 54410641
STPG1 90529 1 chr1 - 24739762-24746587 24740262
HOXC6 3223 1 chr12 + 54405641-54411141 54410641
FBXO9 26268 1 chr6 + 52924795-52930756 52930256
C5orf4 10826 1 chr5 - 154229713-154235213 154230213
SCNN1A 6337 1 chr12 - 6483890-6491523 6484390
~ 8336 1 chr6 - 27860463-27865963 27860963
PIGH 5283 1 chr14 - 68066517-68072017 68067017
REPIN1 29803 1 chr7 + 150060878-150068757 150068257
WIPI2 26100 1 chr7 + 5224834-5230334 5229834
NPY 4852 1 chr7 + 24318806-24324306 24323806
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL