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FAM98A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25940 family with sequence similarity 98, member A chr2 - 33823862 - 33829362 33824362 Transcription Factor Binding Sites   Download all TFBS in the FAM98A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 33827538 33827553 9.0E-06 GCACATAATTCATTAA 16 SP8_C2H2_DBD_monomeric_12_1 SELEX - 33823941 33823952 3.0E-06 GCCACCCCCACT 12 PAX6_PAX_DBD_monomeric_19_1 SELEX + 33823973 33823991 2.0E-06 TGACACGCATGACTGACAA 19 PAX6_PAX_DBD_monomeric_19_1 SELEX + 33827529 33827547 2.0E-06 TTTTATGCTTTAATGAATT 19 Pax6_MA0069.1 JASPAR + 33827530 33827543 6.0E-06 TTTATGCTTTAATG 14 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 33823888 33823900 9.0E-06 TTGAGGGGTTAAG 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 33824299 33824307 6.0E-06 TATTCAAAT 9 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 33827266 33827277 2.0E-06 TGATTGCAATCC 12 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 33827266 33827277 3.0E-06 GGATTGCAATCA 12 POU2F3_POU_DBD_monomeric_9_1 SELEX + 33824299 33824307 6.0E-06 TATTCAAAT 9 PAX5_PAX_DBD_monomeric_18_1 SELEX + 33823973 33823990 9.0E-06 TGACACGCATGACTGACA 18 EWSR1-FLI1_MA0149.1 JASPAR - 33828512 33828529 1.0E-06 GGGAGGCAGGAAGGTAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 33828516 33828533 4.0E-06 AAGAGGGAGGCAGGAAGG 18 POU2F2_POU_DBD_monomeric_11_1 SELEX + 33824298 33824308 6.0E-06 GTATTCAAATT 11 PAX1_PAX_DBD_monomeric_17_1 SELEX + 33823973 33823989 1.0E-06 TGACACGCATGACTGAC 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 33824299 33824307 4.0E-06 TATTCAAAT 9 POU4F3_POU_DBD_monomeric_16_1 SELEX - 33827538 33827553 7.0E-06 GCACATAATTCATTAA 16 TCF4_bHLH_full_dimeric_10_1 SELEX + 33828608 33828617 9.0E-06 CACACCTGCA 10 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 33827483 33827498 9.0E-06 AGACATTCAAATGTGG 16 SP1_MA0079.2 JASPAR - 33823810 33823819 9.0E-06 CCCCTCCTCC 10 PAX9_PAX_DBD_monomeric_17_1 SELEX + 33823973 33823989 0.0E+00 TGACACGCATGACTGAC 17 Pou5f1_MA0142.1 JASPAR + 33828650 33828664 5.0E-06 GATTATGATGCAGAT 15 LHX6_homeodomain_full_dimeric_12_1 SELEX + 33827266 33827277 1.0E-06 TGATTGCAATCC 12 LHX6_homeodomain_full_dimeric_12_1 SELEX - 33827266 33827277 2.0E-06 GGATTGCAATCA 12 NRF1_NRF_full_dimeric_12_1 SELEX + 33824352 33824363 2.0E-06 CGCGCATGCGCG 12 NRF1_NRF_full_dimeric_12_1 SELEX - 33824352 33824363 2.0E-06 CGCGCATGCGCG 12 NRF1_NRF_full_dimeric_12_1 SELEX + 33824498 33824509 7.0E-06 TGCACATGCGCG 12 NRF1_NRF_full_dimeric_12_1 SELEX - 33824498 33824509 6.0E-06 CGCGCATGTGCA 12 PAX7_PAX_full_dimeric_10_1 SELEX + 33827539 33827548 8.0E-06 TAATGAATTA 10 V_MINI20_B_M00324 TRANSFAC + 33823719 33823739 3.0E-06 TGCAGCGCCCATACAAGTGGC 21 V_MTF1_01_M01242 TRANSFAC - 33824485 33824504 1.0E-05 ATGTGCAAAACTGCGGGCCC 20 V_STAT5A_Q6_M01890 TRANSFAC + 33827619 33827631 9.0E-06 TTTCTTCTGAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 33827623 33827635 0.0E+00 ACATTTCTCAGAA 13 V_TST1_02_M01316 TRANSFAC - 33827535 33827551 4.0E-06 ACATAATTCATTAAAGC 17 V_DBX1_01_M01483 TRANSFAC - 33827532 33827548 4.0E-06 TAATTCATTAAAGCATA 17 V_ATF5_01_M01295 TRANSFAC - 33824790 33824800 4.0E-06 ATTCTCCCTTT 11 V_HMGIY_Q3_M01010 TRANSFAC + 33824299 33824313 8.0E-06 TATTCAAATTTCCGA 15 V_BCL6_01_M01183 TRANSFAC - 33827396 33827411 2.0E-06 CTAGAAGGAATTCTTT 16 V_MMEF2_Q6_M00405 TRANSFAC - 33825007 33825022 5.0E-06 CTCCTTAAAATAACAT 16 V_STAT_Q6_M00777 TRANSFAC + 33827618 33827630 5.0E-06 TTTTCTTCTGAGA 13 V_POU5F1_02_M02245 TRANSFAC + 33828650 33828664 5.0E-06 GATTATGATGCAGAT 15 V_ISL2_01_M01328 TRANSFAC - 33827535 33827550 3.0E-06 CATAATTCATTAAAGC 16 V_ZFP740_03_M02834 TRANSFAC - 33823939 33823954 1.0E-05 TCGCCACCCCCACTCC 16 V_POU2F3_01_M01476 TRANSFAC + 33824296 33824311 5.0E-06 TGGTATTCAAATTTCC 16 V_MAF_Q6_M00648 TRANSFAC + 33823788 33823803 3.0E-06 TTGAGAGAAGTGGGGT 16 V_SP1_03_M02281 TRANSFAC - 33823810 33823819 9.0E-06 CCCCTCCTCC 10 V_NFAT2_01_M01748 TRANSFAC - 33828625 33828633 3.0E-06 ATGGAAAAA 9 V_ZFP691_03_M02833 TRANSFAC + 33827365 33827381 0.0E+00 TTTACAGTGCTCAGTCT 17 V_TCFAP2E_04_M02926 TRANSFAC - 33827512 33827525 8.0E-06 TTGAAGAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 33827515 33827528 1.0E-05 AAGTTGAAGAAAAA 14 V_STAT4_Q4_M01666 TRANSFAC - 33827618 33827631 1.0E-06 TTCTCAGAAGAAAA 14 V_TRF1_01_M01237 TRANSFAC + 33824895 33824909 2.0E-06 TCAGGGTTAGGGATG 15 V_ELF4_04_M02850 TRANSFAC - 33827510 33827526 2.0E-06 GTTGAAGAAAAAAATGC 17 V_DBX2_01_M01360 TRANSFAC + 33827533 33827548 4.0E-06 ATGCTTTAATGAATTA 16 V_HIC1_06_M02867 TRANSFAC - 33827450 33827465 2.0E-06 GCTGATGCCCAAAATA 16 V_FOXK1_04_M02856 TRANSFAC - 33827632 33827646 1.0E-06 GACATAATAACACAT 15 V_PAX2_01_M00098 TRANSFAC + 33823970 33823988 5.0E-06 CAATGACACGCATGACTGA 19 V_MEF2_03_M00232 TRANSFAC - 33825005 33825026 9.0E-06 CCTTCTCCTTAAAATAACATGC 22 V_XBP1_02_M01770 TRANSFAC - 33824080 33824090 0.0E+00 AATGCCACGTC 11 V_OCT1_08_M01354 TRANSFAC + 33827533 33827548 3.0E-06 ATGCTTTAATGAATTA 16 V_UNCX4.1_01_M01458 TRANSFAC - 33827534 33827550 5.0E-06 CATAATTCATTAAAGCA 17 V_PIT1_01_M01465 TRANSFAC - 33827535 33827551 2.0E-06 ACATAATTCATTAAAGC 17 V_PIT1_01_M01465 TRANSFAC + 33827536 33827552 8.0E-06 CTTTAATGAATTATGTG 17 V_MEF2_04_M00233 TRANSFAC - 33827444 33827465 7.0E-06 GCTGATGCCCAAAATAAGCAAG 22 V_MEF2_Q6_01_M00941 TRANSFAC + 33825008 33825019 1.0E-06 TGTTATTTTAAG 12 V_NKX3A_01_M00451 TRANSFAC - 33828532 33828543 2.0E-06 TTATAAGTAAAA 12 V_HB24_01_M01399 TRANSFAC - 33827537 33827551 2.0E-06 ACATAATTCATTAAA 15 V_STAT4_Q5_M02117 TRANSFAC + 33827623 33827632 5.0E-06 TTCTGAGAAA 10 V_PAX8_B_M00328 TRANSFAC - 33827527 33827544 6.0E-06 TCATTAAAGCATAAAAAA 18 V_HOXD9_Q2_M01834 TRANSFAC - 33827529 33827538 4.0E-06 AAGCATAAAA 10 V_TFIII_Q6_M00706 TRANSFAC - 33828524 33828532 6.0E-06 AGAGGGAGG 9 V_MINI19_B_M00323 TRANSFAC + 33823719 33823739 8.0E-06 TGCAGCGCCCATACAAGTGGC 21 V_AML2_Q3_01_M01854 TRANSFAC + 33827426 33827436 4.0E-06 CCACACCACTT 11 V_T3R_01_M00239 TRANSFAC + 33824270 33824285 3.0E-06 CCATGAGGTCACACTC 16 V_GATA1_01_M00075 TRANSFAC + 33823676 33823685 6.0E-06 GGTGATAGGT 10 V_BRN4_01_M01473 TRANSFAC - 33827535 33827551 1.0E-06 ACATAATTCATTAAAGC 17 V_BRN4_01_M01473 TRANSFAC + 33827536 33827552 8.0E-06 CTTTAATGAATTATGTG 17 V_IPF1_05_M01255 TRANSFAC - 33827487 33827498 8.0E-06 AGACATTCAAAT 12 V_OCT2_01_M01368 TRANSFAC + 33824296 33824311 7.0E-06 TGGTATTCAAATTTCC 16 V_FOXL1_02_M02857 TRANSFAC - 33827633 33827648 7.0E-06 AGGACATAATAACACA 16 V_AIRE_01_M00999 TRANSFAC + 33827641 33827666 3.0E-06 TATGTCCTTGGAATTTGTGGATTTGT 26 V_ZFP206_01_M01742 TRANSFAC + 33824352 33824362 2.0E-06 CGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 33824353 33824363 2.0E-06 CGCGCATGCGC 11 V_OSR2_03_M02785 TRANSFAC - 33824285 33824300 5.0E-06 TACCACAGTAGCATGG 16 V_STAT1STAT1_Q3_M01212 TRANSFAC - 33827621 33827633 2.0E-06 ATTTCTCAGAAGA 13 V_NRF1_Q6_M00652 TRANSFAC - 33824352 33824361 4.0E-06 CGCATGCGCG 10 V_NRF1_Q6_M00652 TRANSFAC + 33824354 33824363 4.0E-06 CGCATGCGCG 10 V_STAT6_02_M00500 TRANSFAC + 33824866 33824873 1.0E-05 GATTTCCT 8 V_BBX_03_M02739 TRANSFAC - 33827534 33827548 2.0E-06 TAATTCATTAAAGCA 15 V_OCT1_07_M00248 TRANSFAC + 33824297 33824308 6.0E-06 GGTATTCAAATT 12 V_SRF_06_M02916 TRANSFAC - 33827510 33827526 1.0E-06 GTTGAAGAAAAAAATGC 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 33828512 33828529 1.0E-06 GGGAGGCAGGAAGGTAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 33828516 33828533 4.0E-06 AAGAGGGAGGCAGGAAGG 18 V_SOX18_04_M02905 TRANSFAC + 33822733 33822748 3.0E-06 AGACTACATTTAATAA 16 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 33827423 33827430 1.0E-05 TGTGGTTT 8 V_SATB1_01_M01232 TRANSFAC + 33828532 33828543 7.0E-06 TTTTACTTATAA 12 V_HOXD8_01_M01432 TRANSFAC - 33827532 33827548 3.0E-06 TAATTCATTAAAGCATA 17 V_SOX1_03_M02802 TRANSFAC - 33827536 33827551 1.0E-06 ACATAATTCATTAAAG 16 V_MEF2_01_M00006 TRANSFAC - 33823779 33823794 9.0E-06 CTCTCAAAATTTCTCC 16 V_MEF2A_05_M01301 TRANSFAC + 33825008 33825019 2.0E-06 TGTTATTTTAAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 33824456 33824469 4.0E-06 GGCAGGGGTGGGGC 14 V_BRN3C_01_M01408 TRANSFAC + 33827533 33827548 8.0E-06 ATGCTTTAATGAATTA 16 V_GFI1_Q6_01_M02010 TRANSFAC - 33823954 33823963 4.0E-06 CTCTGATTTT 10 V_STAT1_05_M01260 TRANSFAC + 33827620 33827641 4.0E-06 TTCTTCTGAGAAATGTGTTATT 22 V_PAX4_04_M00380 TRANSFAC + 33824436 33824465 4.0E-06 GAAACTTGGTCCCACTGACCGCCCCACCCC 30 V_PAX6_01_M00097 TRANSFAC + 33823970 33823990 1.0E-05 CAATGACACGCATGACTGACA 21 V_PAX6_01_M00097 TRANSFAC + 33827526 33827546 0.0E+00 CTTTTTTATGCTTTAATGAAT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.