Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

HIRIP3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
8479 HIRA interacting protein 3 chr16 -30006917 - 30012417 30007417

Transcription Factor Binding Sites

 
Download all TFBS in the HIRIP3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 30007336 30007344 8.0E-06 ACACTTGAA 9
GABPA_MA0062.2 JASPAR + 30007548 30007558 1.0E-06 CCGGAAGTGGA 11
Zfp423_MA0116.1 JASPAR + 30007186 30007200 7.0E-06 GCACCCTTTGGGTGA 15
YY1_C2H2_full_monomeric_11_1 SELEX + 30007382 30007392 3.0E-06 TCCGCCATTTT 11
PAX1_PAX_DBD_monomeric_17_1 SELEX - 30006431 30006447 6.0E-06 GGTTCCGCTTCAATTCA 17
Klf4_MA0039.2 JASPAR + 30007788 30007797 5.0E-06 TGGGTGGGGC 10
TCF4_bHLH_full_dimeric_10_1 SELEX + 30006659 30006668 9.0E-06 CACACCTGCA 10
SP1_MA0079.2 JASPAR + 30006600 30006609 9.0E-06 CCCCTCCTCC 10
YY2_C2H2_full_monomeric_11_1 SELEX + 30007382 30007392 0.0E+00 TCCGCCATTTT 11
PAX9_PAX_DBD_monomeric_17_1 SELEX - 30006431 30006447 8.0E-06 GGTTCCGCTTCAATTCA 17
DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 30007199 30007211 5.0E-06 GAAACCTAATCAG 13
NR3C1_MA0113.1 JASPAR - 30006283 30006300 4.0E-06 GGGAACAGCAAGTACAGA 18
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 30003960 30003970 1.0E-06 TTTCCCCACCC 11
RUNX1_MA0002.2 JASPAR + 30007327 30007337 9.0E-06 TTTTGTGGCTT 11
ETV6_ETS_full_dimeric_15_1 SELEX + 30007682 30007696 5.0E-06 TCTGAAGCGGAAGCT 15
FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 30003960 30003971 8.0E-06 TTTCCCCACCCC 12
NRF1_NRF_full_dimeric_12_1 SELEX + 30007000 30007011 5.0E-06 CGCGCACGCGCA 12
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 30007663 30007675 5.0E-06 ACAAAAAAAAATA 13
V_IPF1_02_M01234 TRANSFAC + 30007202 30007211 5.0E-06 ACCTAATCAG 10
V_ATF5_01_M01295 TRANSFAC - 30004011 30004021 0.0E+00 CTTCTCCCTTA 11
V_ATF5_01_M01295 TRANSFAC + 30006211 30006221 6.0E-06 CTTCTCCCTTC 11
V_NF1A_Q6_M02103 TRANSFAC + 30003906 30003921 7.0E-06 TGGGCCTGTAGCCAGA 16
V_AR_Q6_01_M01996 TRANSFAC + 30006286 30006300 3.0E-06 GTACTTGCTGTTCCC 15
V_NKX25_Q6_M02108 TRANSFAC - 30007335 30007345 2.0E-06 GACACTTGAAG 11
V_P53_DECAMER_Q2_M00761 TRANSFAC - 30007087 30007096 9.0E-06 AAACAAGTCT 10
V_SP1_03_M02281 TRANSFAC + 30006600 30006609 9.0E-06 CCCCTCCTCC 10
V_PU1_Q4_M01172 TRANSFAC + 30007692 30007710 7.0E-06 AAGCTCAAGTTCCTCATCT 19
V_NR3C1_01_M02219 TRANSFAC - 30006283 30006300 4.0E-06 GGGAACAGCAAGTACAGA 18
V_TCFAP2E_04_M02926 TRANSFAC + 30007659 30007672 3.0E-06 GACTACAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 30007662 30007675 0.0E+00 TACAAAAAAAAATA 14
V_MYBL1_04_M02884 TRANSFAC - 30007100 30007114 9.0E-06 CCTCCAACTGCCCAG 15
V_ELF4_04_M02850 TRANSFAC + 30007660 30007676 0.0E+00 ACTACAAAAAAAAATAC 17
V_ELF4_04_M02850 TRANSFAC + 30007661 30007677 1.0E-05 CTACAAAAAAAAATACC 17
V_GC_01_M00255 TRANSFAC - 30006597 30006610 8.0E-06 AGGAGGAGGGGCCT 14
V_GC_01_M00255 TRANSFAC - 30006618 30006631 7.0E-06 CGGAGGCGGGGCTT 14
V_GCM1_04_M02862 TRANSFAC + 30004005 30004021 3.0E-06 TTTGCATAAGGGAGAAG 17
V_ZFP105_03_M02827 TRANSFAC + 30007662 30007676 0.0E+00 TACAAAAAAAAATAC 15
V_FKLF_Q5_M01837 TRANSFAC + 30006471 30006480 2.0E-06 GGGGTGGGAG 10
V_FOXO1_02_M00474 TRANSFAC + 30007088 30007101 7.0E-06 GACTTGTTTTCTCT 14
V_RUNX1_01_M02257 TRANSFAC + 30007327 30007337 9.0E-06 TTTTGTGGCTT 11
V_KROX_Q6_M00982 TRANSFAC + 30006622 30006635 1.0E-05 CCCGCCTCCGCCTC 14
V_TTF1_Q6_M00794 TRANSFAC - 30006367 30006378 7.0E-06 CACTCAAGAAGC 12
V_SFPI1_04_M02896 TRANSFAC + 30007670 30007683 8.0E-06 AAAATACCGGAATC 14
V_YY1_Q6_02_M01035 TRANSFAC + 30007382 30007392 0.0E+00 TCCGCCATTTT 11
V_REX1_03_M01744 TRANSFAC - 30007381 30007392 2.0E-06 AAAATGGCGGAC 12
V_SRF_Q5_02_M01007 TRANSFAC + 30007126 30007144 3.0E-06 CCTACCCTTTTTTGGAACG 19
V_GATA5_04_M02860 TRANSFAC + 30007757 30007773 9.0E-06 GGACAAGATCTCAGTTT 17
V_SRF_03_M01304 TRANSFAC - 30007130 30007142 4.0E-06 TTCCAAAAAAGGG 13
V_ELK1_01_M00007 TRANSFAC + 30007684 30007699 7.0E-06 TGAAGCGGAAGCTCAA 16
V_GCNF_01_M00526 TRANSFAC + 30007689 30007706 2.0E-06 CGGAAGCTCAAGTTCCTC 18
V_YY1_03_M02044 TRANSFAC + 30007382 30007393 1.0E-06 TCCGCCATTTTT 12
V_LBP9_01_M01592 TRANSFAC - 30007087 30007103 9.0E-06 CCAGAGAAAACAAGTCT 17
V_TCFE2A_03_M02823 TRANSFAC + 30007772 30007788 6.0E-06 TTACCCAGGTGTAAAGT 17
V_ZFP206_01_M01742 TRANSFAC + 30007000 30007010 9.0E-06 CGCGCACGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 30007001 30007011 7.0E-06 TGCGCGTGCGC 11
V_ASCL2_04_M02841 TRANSFAC + 30003959 30003974 1.0E-06 TTTTCCCCACCCCTTT 16
V_SRF_02_M01257 TRANSFAC - 30007125 30007142 4.0E-06 TTCCAAAAAAGGGTAGGA 18
V_SRF_06_M02916 TRANSFAC + 30007660 30007676 1.0E-06 ACTACAAAAAAAAATAC 17
V_SRF_06_M02916 TRANSFAC + 30007661 30007677 3.0E-06 CTACAAAAAAAAATACC 17
V_VDR_Q3_M00444 TRANSFAC + 30008180 30008194 8.0E-06 GGGTGAGCAAGGTCT 15
V_TFE_Q6_M01029 TRANSFAC + 30003888 30003895 1.0E-05 TCATGTGA 8
V_PAX6_01_M00097 TRANSFAC - 30006430 30006450 5.0E-06 AAAGGTTCCGCTTCAATTCAG 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL