Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

XRRA1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
143570 X-ray radiation resistance associated 1 chr11 -74659732 - 74665232 74660232

Transcription Factor Binding Sites

 
Download all TFBS in the XRRA1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 74664747 74664764 7.0E-06 TATGCAAATATAATCTTT 18
PAX6_PAX_DBD_monomeric_19_1 SELEX - 74662486 74662504 7.0E-06 GTACACACTTGAGCGAATA 19
SOX4_HMG_DBD_dimeric_16_1 SELEX - 74664710 74664725 1.0E-06 CAAGAATTGCTGTGTT 16
RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 74661666 74661681 3.0E-06 TAAGCTTAAGAGTTCA 16
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 74660992 74661008 2.0E-06 AAAAACAACAGGAAAAA 17
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 74664622 74664638 8.0E-06 ATAAAGAAGTGTAATAA 17
FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 74664747 74664758 7.0E-06 TATGCAAATATA 12
POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 74664747 74664755 2.0E-06 TATGCAAAT 9
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 74664747 74664757 6.0E-06 TATGCAAATAT 11
POU2F3_POU_DBD_monomeric_9_1 SELEX + 74664747 74664755 2.0E-06 TATGCAAAT 9
SOX8_HMG_full_dimeric_15_1 SELEX - 74664710 74664724 1.0E-06 AAGAATTGCTGTGTT 15
PAX5_PAX_DBD_monomeric_18_1 SELEX + 74661621 74661638 1.0E-06 GGTCACGCTCCATTGCCC 18
EWSR1-FLI1_MA0149.1 JASPAR - 74661016 74661033 3.0E-06 GGAGGGAAGAGAGGAGAG 18
POU1F1_POU_DBD_monomeric_14_1 SELEX + 74664745 74664758 6.0E-06 AGTATGCAAATATA 14
NFYA_MA0060.1 JASPAR + 74660275 74660290 4.0E-06 TCCAGCCAATCGGCTT 16
POU2F2_POU_DBD_monomeric_11_1 SELEX + 74664746 74664756 2.0E-06 GTATGCAAATA 11
PAX2_PAX_DBD_monomeric_18_1 SELEX + 74661621 74661638 0.0E+00 GGTCACGCTCCATTGCCC 18
POU3F4_POU_DBD_monomeric_9_1 SELEX + 74664747 74664755 2.0E-06 TATGCAAAT 9
PAX1_PAX_DBD_monomeric_17_1 SELEX + 74661621 74661637 1.0E-06 GGTCACGCTCCATTGCC 17
Pou2f2_POU_DBD_monomeric_9_1 SELEX + 74664747 74664755 2.0E-06 TATGCAAAT 9
POU3F3_POU_DBD_monomeric_13_1 SELEX + 74664745 74664757 1.0E-06 AGTATGCAAATAT 13
TCF4_bHLH_full_dimeric_10_1 SELEX + 74662591 74662600 3.0E-06 CACACCTGTA 10
MEF2A_MA0052.1 JASPAR - 74664736 74664745 7.0E-06 TTATTTTTAA 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 74655919 74655933 3.0E-06 AATGAATGAGTAACT 15
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 74659832 74659841 9.0E-06 AGCAGCTGTC 10
SOX18_HMG_full_dimeric_15_1 SELEX - 74664710 74664724 6.0E-06 AAGAATTGCTGTGTT 15
NFATC1_NFAT_full_dimeric_20_1 SELEX - 74659949 74659968 3.0E-06 GACTGAAACTTAGTTTTCGA 20
YY2_C2H2_full_monomeric_11_1 SELEX - 74660328 74660338 4.0E-06 GCCGCCATCTT 11
SOX7_HMG_full_dimeric_17_1 SELEX - 74664709 74664725 6.0E-06 CAAGAATTGCTGTGTTC 17
POU1F1_POU_DBD_monomeric_17_1 SELEX - 74664740 74664756 5.0E-06 TATTTGCATACTTATTT 17
PAX9_PAX_DBD_monomeric_17_1 SELEX + 74661621 74661637 1.0E-06 GGTCACGCTCCATTGCC 17
POU3F1_POU_DBD_monomeric_12_1 SELEX + 74664746 74664757 4.0E-06 GTATGCAAATAT 12
EN1_homeodomain_full_dimeric_14_1 SELEX - 74664743 74664756 7.0E-06 TATTTGCATACTTA 14
IRF9_IRF_full_trimeric_15_1 SELEX - 74664609 74664623 8.0E-06 ATGGCAAGTGAAACT 15
ERF_ETS_DBD_monomeric_10_1 SELEX + 74660412 74660421 9.0E-06 ACAGGAAGTG 10
TBX21_TBX_full_dimeric_19_1 SELEX - 74661598 74661616 3.0E-06 TCACAAGAGAAGAGTGTGA 19
POU2F1_POU_DBD_monomeric_12_1 SELEX + 74664745 74664756 1.0E-06 AGTATGCAAATA 12
Tp53_p53l_DBD_dimeric_17_1 SELEX + 74663056 74663072 9.0E-06 ACAAGTAGATAGCATCT 17
Sox11_HMG_DBD_dimeric_15_1 SELEX - 74664710 74664724 1.0E-06 AAGAATTGCTGTGTT 15
ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 74664770 74664786 7.0E-06 TCCATCACAGAATAACT 17
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 74661666 74661680 4.0E-06 AAGCTTAAGAGTTCA 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 74655919 74655933 4.0E-06 AATGAATGAGTAACT 15
POU3F3_POU_DBD_dimeric_12_1 SELEX + 74664738 74664749 7.0E-06 AAAAATAAGTAT 12
POU3F2_POU_DBD_monomeric_12_1 SELEX + 74664746 74664757 5.0E-06 GTATGCAAATAT 12
ELF5_MA0136.1 JASPAR - 74662470 74662478 4.0E-06 TACTTCCTT 9
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 74664747 74664757 6.0E-06 TATGCAAATAT 11
SOX9_HMG_full_dimeric_17_1 SELEX - 74664709 74664725 3.0E-06 CAAGAATTGCTGTGTTC 17
V_FOXP1_01_M00987 TRANSFAC + 74661554 74661573 0.0E+00 TTACTTGTCTTTTTGAGTGT 20
V_FOXP1_01_M00987 TRANSFAC - 74664738 74664757 4.0E-06 ATATTTGCATACTTATTTTT 20
V_HSF2_01_M00147 TRANSFAC + 74659846 74659855 5.0E-06 AGAATAATCG 10
V_TGIF_01_M00418 TRANSFAC - 74659828 74659838 2.0E-06 AGCTGTCATTT 11
V_MEIS1_02_M01419 TRANSFAC - 74659827 74659842 0.0E+00 AAGCAGCTGTCATTTT 16
V_ZSCAN4_03_M02838 TRANSFAC + 74659739 74659755 5.0E-06 TGGAAGTGCACATAGGA 17
V_PREP1_01_M01459 TRANSFAC - 74659827 74659842 3.0E-06 AAGCAGCTGTCATTTT 16
V_TCF3_01_M01594 TRANSFAC + 74660984 74660996 3.0E-06 TTTTTCTTTTTTT 13
V_POU3F3_01_M03090 TRANSFAC - 74664742 74664758 2.0E-06 TATATTTGCATACTTAT 17
V_POU3F3_01_M03090 TRANSFAC + 74664743 74664759 2.0E-06 TAAGTATGCAAATATAA 17
V_AREB6_03_M00414 TRANSFAC + 74659920 74659931 7.0E-06 CCACACCTGGGC 12
V_BCL6_01_M01183 TRANSFAC - 74659809 74659824 8.0E-06 CTGTTTGTAATGTTTT 16
V_BCL6_01_M01183 TRANSFAC + 74660977 74660992 8.0E-06 TTTAAGATTTTTCTTT 16
V_GM397_03_M02760 TRANSFAC - 74659738 74659754 3.0E-06 CCTATGTGCACTTCCAG 17
V_GM397_03_M02760 TRANSFAC + 74659739 74659755 8.0E-06 TGGAAGTGCACATAGGA 17
V_GATA3_03_M00351 TRANSFAC - 74664755 74664764 5.0E-06 AAAGATTATA 10
V_OCT1_Q5_01_M00930 TRANSFAC - 74664747 74664757 2.0E-06 ATATTTGCATA 11
V_MEF2_02_M00231 TRANSFAC - 74662459 74662480 3.0E-06 TATACTTCCTTAAATAGATTCA 22
V_OCTAMER_01_M01324 TRANSFAC - 74664742 74664758 2.0E-06 TATATTTGCATACTTAT 17
V_OCTAMER_01_M01324 TRANSFAC + 74664743 74664759 2.0E-06 TAAGTATGCAAATATAA 17
V_IRF_Q6_01_M00972 TRANSFAC - 74660985 74660995 6.0E-06 AAAAAAGAAAA 11
V_NFAT3_Q3_M01734 TRANSFAC - 74655941 74655950 1.0E-05 ACATTTTCCA 10
V_NFAT3_Q3_M01734 TRANSFAC + 74660990 74660999 6.0E-06 TTTTTTTCCT 10
V_OCT1_01_M00135 TRANSFAC + 74664742 74664760 0.0E+00 ATAAGTATGCAAATATAAT 19
V_POU2F3_01_M01476 TRANSFAC + 74664744 74664759 0.0E+00 AAGTATGCAAATATAA 16
V_FOXO3A_Q1_M01137 TRANSFAC + 74664737 74664748 2.0E-06 TAAAAATAAGTA 12
V_YY1_Q6_M00793 TRANSFAC - 74660327 74660335 7.0E-06 GCCATCTTG 9
V_OCT_C_M00210 TRANSFAC - 74664746 74664758 2.0E-06 TATATTTGCATAC 13
V_E2A_Q2_M00804 TRANSFAC + 74659969 74659982 7.0E-06 GCACCTGCCTCCGG 14
V_TCFAP2E_04_M02926 TRANSFAC - 74660989 74661002 1.0E-06 AACAGGAAAAAAAG 14
V_MEF2A_Q6_M02024 TRANSFAC - 74664735 74664744 9.0E-06 TATTTTTAAG 10
V_AR_03_M00956 TRANSFAC + 74660937 74660963 6.0E-06 TATTTGAGTATTGACTGTTCTACTGGG 27
V_CETS1P54_02_M00074 TRANSFAC - 74660991 74661003 8.0E-06 CAACAGGAAAAAA 13
V_TGIF2_01_M01407 TRANSFAC - 74659827 74659842 2.0E-06 AAGCAGCTGTCATTTT 16
V_RPC155_01_M01798 TRANSFAC - 74661661 74661676 2.0E-06 TTAAGAGTTCAAGGCC 16
V_MEIS2_01_M01488 TRANSFAC - 74659827 74659842 0.0E+00 AAGCAGCTGTCATTTT 16
V_TGIF_02_M01346 TRANSFAC + 74659826 74659842 0.0E+00 TAAAATGACAGCTGCTT 17
V_PR_01_M00954 TRANSFAC + 74660937 74660963 5.0E-06 TATTTGAGTATTGACTGTTCTACTGGG 27
V_GATA3_05_M02859 TRANSFAC - 74663057 74663078 1.0E-06 CTAATCAGATGCTATCTACTTG 22
V_STAF_01_M00262 TRANSFAC + 74661632 74661653 8.0E-06 ATTGCCCAGAATGGATCTTAGC 22
V_HNF1_Q6_M00790 TRANSFAC - 74655917 74655934 4.0E-06 AAGTTACTCATTCATTCT 18
V_TEF_Q6_M00672 TRANSFAC + 74664748 74664759 1.0E-06 ATGCAAATATAA 12
V_NFAT_Q6_M00302 TRANSFAC - 74660991 74661002 6.0E-06 AACAGGAAAAAA 12
V_PXRRXR_02_M01153 TRANSFAC - 74661666 74661673 1.0E-05 AGAGTTCA 8
V_MAZ_Q6_01_M02023 TRANSFAC + 74660298 74660311 0.0E+00 GTCGGAGGGGAGGG 14
V_PAX5_01_M00143 TRANSFAC - 74660065 74660092 1.0E-06 GCGGCAGGCACCGCAGTGGAGCGGCTCC 28
V_SFPI1_04_M02896 TRANSFAC + 74662464 74662477 1.0E-05 CTATTTAAGGAAGT 14
V_ELF5_01_M01197 TRANSFAC + 74662468 74662478 1.0E-06 TTAAGGAAGTA 11
V_YY1_Q6_02_M01035 TRANSFAC - 74660328 74660338 7.0E-06 GCCGCCATCTT 11
V_OCT1_04_M00138 TRANSFAC + 74664740 74664762 0.0E+00 AAATAAGTATGCAAATATAATCT 23
V_REX1_03_M01744 TRANSFAC + 74660328 74660339 1.0E-06 AAGATGGCGGCG 12
V_GR_01_M00955 TRANSFAC + 74660937 74660963 1.0E-06 TATTTGAGTATTGACTGTTCTACTGGG 27
V_HBP1_03_M02762 TRANSFAC + 74655909 74655924 6.0E-06 TAAATGAAAGAATGAA 16
V_HBP1_03_M02762 TRANSFAC + 74655913 74655928 4.0E-06 TGAAAGAATGAATGAG 16
V_HBP1_03_M02762 TRANSFAC + 74655917 74655932 3.0E-06 AGAATGAATGAGTAAC 16
V_GR_Q6_M00192 TRANSFAC - 74664706 74664724 7.0E-06 AAGAATTGCTGTGTTCTTA 19
V_TEL2_Q6_M00678 TRANSFAC - 74660413 74660422 6.0E-06 CCACTTCCTG 10
V_BBX_04_M02843 TRANSFAC + 74659795 74659811 8.0E-06 TCTCCGTTAACACGAAA 17
V_MEF2_Q6_01_M00941 TRANSFAC - 74664736 74664747 2.0E-06 ACTTATTTTTAA 12
V_NKX3A_01_M00451 TRANSFAC + 74664740 74664751 4.0E-06 AAATAAGTATGC 12
V_CETS1P54_01_M00032 TRANSFAC + 74660412 74660421 9.0E-06 ACAGGAAGTG 10
V_BRACH_01_M00150 TRANSFAC - 74659827 74659850 3.0E-06 ATTCTCTCAAGCAGCTGTCATTTT 24
V_TGIF1_01_M03111 TRANSFAC + 74659826 74659842 0.0E+00 TAAAATGACAGCTGCTT 17
V_OCT1_B_M00342 TRANSFAC + 74664747 74664756 0.0E+00 TATGCAAATA 10
V_ISGF4G_04_M02875 TRANSFAC + 74659807 74659820 1.0E-06 CGAAAACATTACAA 14
V_OCT_Q6_M00795 TRANSFAC - 74664747 74664757 1.0E-06 ATATTTGCATA 11
V_FOXO1_Q5_M01216 TRANSFAC - 74661000 74661008 5.0E-06 AAAAACAAC 9
V_IRF7_01_M00453 TRANSFAC + 74659942 74659959 2.0E-06 CTCGAATTCGAAAACTAA 18
V_TFIII_Q6_M00706 TRANSFAC - 74661035 74661043 6.0E-06 AGAGGGAGG 9
V_ELF1_Q6_M00746 TRANSFAC - 74660993 74661004 9.0E-06 ACAACAGGAAAA 12
V_YY1_03_M02044 TRANSFAC - 74660327 74660338 1.0E-06 GCCGCCATCTTG 12
V_MYOD_Q6_02_M02100 TRANSFAC - 74659831 74659839 4.0E-06 CAGCTGTCA 9
V_MTF1_06_M02882 TRANSFAC - 74660982 74660995 0.0E+00 AAAAAAGAAAAATC 14
V_GATA2_01_M00076 TRANSFAC - 74660090 74660099 6.0E-06 GAAGATAGCG 10
V_NFYC_Q5_M02107 TRANSFAC + 74660277 74660290 9.0E-06 CAGCCAATCGGCTT 14
V_POU5F1_01_M01307 TRANSFAC + 74664747 74664756 2.0E-06 TATGCAAATA 10
V_GABPBETA_Q3_M01876 TRANSFAC + 74660412 74660422 5.0E-06 ACAGGAAGTGG 11
V_MRG2_01_M01395 TRANSFAC - 74659827 74659842 1.0E-06 AAGCAGCTGTCATTTT 16
V_PKNOX2_01_M01411 TRANSFAC - 74659827 74659842 0.0E+00 AAGCAGCTGTCATTTT 16
V_OCT2_01_M01368 TRANSFAC + 74664744 74664759 0.0E+00 AAGTATGCAAATATAA 16
V_AREB6_02_M00413 TRANSFAC + 74662590 74662601 6.0E-06 TCACACCTGTAA 12
V_LUN1_01_M00480 TRANSFAC - 74661702 74661718 1.0E-06 TCCCAGCTACTCAGGAA 17
V_TFIIA_Q6_M00707 TRANSFAC + 74662465 74662476 4.0E-06 TATTTAAGGAAG 12
V_NFY_01_M00287 TRANSFAC + 74660275 74660290 8.0E-06 TCCAGCCAATCGGCTT 16
V_TBX15_02_M01264 TRANSFAC - 74659910 74659927 2.0E-06 AGGTGTGGAGTTTCCAAA 18
V_TBX5_Q5_M01044 TRANSFAC + 74662589 74662598 3.0E-06 CTCACACCTG 10
V_SRF_06_M02916 TRANSFAC - 74660981 74660997 3.0E-06 GAAAAAAAGAAAAATCT 17
V_SRF_06_M02916 TRANSFAC - 74660982 74660998 9.0E-06 GGAAAAAAAGAAAAATC 17
V_HFH3_01_M00289 TRANSFAC - 74664747 74664759 4.0E-06 TTATATTTGCATA 13
V_EWSR1FLI1_01_M02252 TRANSFAC - 74661016 74661033 3.0E-06 GGAGGGAAGAGAGGAGAG 18
V_ZIC3_04_M02837 TRANSFAC - 74660048 74660062 4.0E-06 GATCCCCGGGGGGCT 15
V_HNF1A_Q5_M02013 TRANSFAC - 74655923 74655933 5.0E-06 AGTTACTCATT 11
V_PR_02_M00957 TRANSFAC + 74660937 74660963 5.0E-06 TATTTGAGTATTGACTGTTCTACTGGG 27
V_PIT1_Q6_M00802 TRANSFAC - 74664737 74664754 2.0E-06 TTTGCATACTTATTTTTA 18
V_MEF2_01_M00006 TRANSFAC + 74664734 74664749 9.0E-06 TCTTAAAAATAAGTAT 16
V_ARP1_01_M00155 TRANSFAC + 74661658 74661673 1.0E-06 TGCGGCCTTGAACTCT 16
V_MEF2A_05_M01301 TRANSFAC - 74664736 74664747 1.0E-06 ACTTATTTTTAA 12
V_ELF5_04_M02241 TRANSFAC - 74662470 74662478 4.0E-06 TACTTCCTT 9
V_NFYA_Q5_M02106 TRANSFAC + 74660277 74660290 9.0E-06 CAGCCAATCGGCTT 14
V_OBOX5_01_M01381 TRANSFAC - 74664751 74664767 7.0E-06 CGGAAAGATTATATTTG 17
V_ZIC2_04_M02836 TRANSFAC - 74660048 74660062 4.0E-06 GATCCCCGGGGGGCT 15
V_ZIC2_04_M02836 TRANSFAC + 74660049 74660063 9.0E-06 GCCCCCCGGGGATCT 15
V_OBOX6_06_M03067 TRANSFAC + 74664751 74664767 7.0E-06 CAAATATAATCTTTCCG 17
V_PAX4_04_M00380 TRANSFAC + 74659808 74659837 7.0E-06 GAAAACATTACAAACAGCTAAAATGACAGC 30
V_TCF11_01_M00285 TRANSFAC - 74659822 74659834 1.0E-06 GTCATTTTAGCTG 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL