Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

C11orf9


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
745 myelin regulatory factor chr11 +61515120 - 61523360 61522860

Transcription Factor Binding Sites

 
Download all TFBS in the C11orf9 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 61515322 61515340 4.0E-06 TACACAGCAGGTGGCGCTG 19
CTCF_MA0139.1 JASPAR + 61520003 61520021 3.0E-06 GGGCCGGCAGGGGGCGCTG 19
MYF6_bHLH_full_dimeric_10_1 SELEX + 61517195 61517204 8.0E-06 AACAATTGTC 10
RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 61519750 61519765 5.0E-06 ACGGGACAAGATGTCA 16
RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 61524315 61524332 8.0E-06 GGAGGGCATTTGAGGGCA 18
ESR2_MA0258.1 JASPAR - 61524326 61524343 8.0E-06 AAAGGCCATTCTGCCCTC 18
EBF1_EBF_full_dimeric_14_1 SELEX + 61524373 61524386 9.0E-06 ACTCCCAAGGGGTT 14
EBF1_EBF_full_dimeric_14_1 SELEX - 61524373 61524386 9.0E-06 AACCCCTTGGGAGT 14
SRY_HMG_DBD_dimeric_16_1 SELEX - 61517189 61517204 7.0E-06 GACAATTGTTATTCTC 16
RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 61524316 61524332 5.0E-06 GAGGGCATTTGAGGGCA 17
EWSR1-FLI1_MA0149.1 JASPAR - 61524550 61524567 0.0E+00 GGAAGGTGGGAAGGTAAG 18
Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 61524315 61524332 8.0E-06 GGAGGGCATTTGAGGGCA 18
NFYA_MA0060.1 JASPAR - 61524439 61524454 3.0E-06 GGCAGCCAATGAGCAG 16
GATA5_GATA_DBD_monomeric_8_1 SELEX + 61522195 61522202 7.0E-06 AGATAAGA 8
EGR1_C2H2_full_monomeric_14_1 SELEX - 61517303 61517316 1.0E-05 ACCGCCCCCGCAGG 14
GATA4_GATA_DBD_monomeric_8_1 SELEX + 61522195 61522202 7.0E-06 AGATAAGA 8
PAX1_PAX_DBD_monomeric_17_1 SELEX + 61522473 61522489 4.0E-06 CGTCACTCTTGAGTGCT 17
FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 61524494 61524507 6.0E-06 AGAAATTATTAACT 14
NR2F1_MA0017.1 JASPAR + 61524460 61524473 7.0E-06 TGGACTTTGCCCTC 14
Klf4_MA0039.2 JASPAR - 61517648 61517657 1.0E-05 AGGGTGGGGC 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 61524493 61524507 1.0E-06 CAGAAATTATTAACT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 61524505 61524519 3.0E-06 ACTGAATCATTAACT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 61524505 61524519 6.0E-06 AGTTAATGATTCAGT 15
ESR1_MA0112.2 JASPAR - 61524327 61524346 6.0E-06 GGAAAAGGCCATTCTGCCCT 20
SP1_MA0079.2 JASPAR - 61517172 61517181 9.0E-06 CCCCTCCTCC 10
SP1_MA0079.2 JASPAR + 61517450 61517459 3.0E-06 CCCCTCCCCC 10
SP1_MA0079.2 JASPAR + 61517549 61517558 3.0E-06 CCCCTCCCCC 10
HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 61524458 61524473 1.0E-06 GAGGGCAAAGTCCAAG 16
ZIC3_C2H2_full_monomeric_15_1 SELEX - 61515323 61515337 8.0E-06 CGCCACCTGCTGTGT 15
CTCF_C2H2_full_monomeric_17_1 SELEX - 61520004 61520020 1.0E-06 AGCGCCCCCTGCCGGCC 17
Gata1_MA0035.2 JASPAR + 61522193 61522203 2.0E-06 AGAGATAAGAG 11
GATA3_GATA_full_monomeric_8_1 SELEX + 61522195 61522202 7.0E-06 AGATAAGA 8
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 61524494 61524506 2.0E-06 GTTAATAATTTCT 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 61524506 61524518 8.0E-06 GTTAATGATTCAG 13
PAX9_PAX_DBD_monomeric_17_1 SELEX + 61522473 61522489 3.0E-06 CGTCACTCTTGAGTGCT 17
FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 61524494 61524507 7.0E-06 AGTTAATAATTTCT 14
ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 61515415 61515431 4.0E-06 CCTTCCCCTGACCCTGC 17
DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 61524502 61524514 5.0E-06 TTAACTGAATCAT 13
HNF4A_MA0114.1 JASPAR - 61524460 61524472 0.0E+00 AGGGCAAAGTCCA 13
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 61524460 61524473 3.0E-06 GAGGGCAAAGTCCA 14
FOXC1_MA0032.1 JASPAR + 61523975 61523982 7.0E-06 AGTAAGTA 8
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 61524493 61524507 2.0E-06 CAGAAATTATTAACT 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 61524505 61524519 3.0E-06 ACTGAATCATTAACT 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 61524505 61524519 7.0E-06 AGTTAATGATTCAGT 15
HNF1A_MA0046.1 JASPAR - 61524494 61524507 0.0E+00 AGTTAATAATTTCT 14
ZIC1_C2H2_full_monomeric_14_1 SELEX - 61515324 61515337 5.0E-06 CGCCACCTGCTGTG 14
V_SRF_Q6_M00186 TRANSFAC + 61515554 61515567 1.0E-05 GGCCAAACAAGGGT 14
V_TAXCREB_01_M00114 TRANSFAC + 61522127 61522141 8.0E-06 GGGGGCTGACGCCAC 15
V_KLF15_Q2_M01714 TRANSFAC + 61522226 61522239 7.0E-06 GAGCAGGGGAGGGG 14
V_STAT5A_Q6_M01890 TRANSFAC + 61517105 61517117 5.0E-06 CCGTTTCTCAGAA 13
V_FLI1_Q6_M01208 TRANSFAC + 61524104 61524114 7.0E-06 CAGGAAGTGCT 11
V_TCFE2A_04_M02927 TRANSFAC - 61527361 61527377 4.0E-06 CAGGTCAGATGTTTGCT 17
V_GATA2_02_M00348 TRANSFAC + 61522193 61522202 0.0E+00 AGAGATAAGA 10
V_SMAD3_Q6_01_M01888 TRANSFAC - 61523947 61523959 3.0E-06 GGACAGACAGAGA 13
V_ESR1_01_M02261 TRANSFAC - 61524327 61524346 6.0E-06 GGAAAAGGCCATTCTGCCCT 20
V_ZFX_01_M01593 TRANSFAC - 61522314 61522329 6.0E-06 CCCTAGGCCTCAGGGG 16
V_SOX30_03_M02804 TRANSFAC + 61517191 61517206 1.0E-06 GAATAACAATTGTCTT 16
V_ETS_B_M00340 TRANSFAC + 61524102 61524115 5.0E-06 GGCAGGAAGTGCTC 14
V_HNF4_Q6_M00967 TRANSFAC - 61524459 61524467 2.0E-06 AAAGTCCAA 9
V_EAR2_Q2_M01728 TRANSFAC + 61524460 61524473 6.0E-06 TGGACTTTGCCCTC 14
V_SP1_03_M02281 TRANSFAC - 61517172 61517181 9.0E-06 CCCCTCCTCC 10
V_SP1_03_M02281 TRANSFAC + 61517450 61517459 3.0E-06 CCCCTCCCCC 10
V_SP1_03_M02281 TRANSFAC + 61517549 61517558 3.0E-06 CCCCTCCCCC 10
V_HNF4A_03_M02220 TRANSFAC - 61524460 61524472 0.0E+00 AGGGCAAAGTCCA 13
V_GKLF_02_M01588 TRANSFAC + 61517648 61517659 5.0E-06 GCCCCACCCTCC 12
V_SP1_02_M01303 TRANSFAC + 61524089 61524099 5.0E-06 GGGGTGGGGGG 11
V_PPARGRXRA_01_M02262 TRANSFAC - 61524336 61524350 1.0E-05 CCAGGGAAAAGGCCA 15
V_PPARGRXRA_01_M02262 TRANSFAC - 61524460 61524474 1.0E-05 GGAGGGCAAAGTCCA 15
V_TAL1_Q6_M00993 TRANSFAC - 61517244 61517253 7.0E-06 TCCAGCTGAT 10
V_SOX13_03_M02797 TRANSFAC + 61517190 61517205 5.0E-06 AGAATAACAATTGTCT 16
V_ZNF219_01_M01122 TRANSFAC - 61524090 61524101 2.0E-06 CACCCCCCACCC 12
V_ROAZ_01_M00467 TRANSFAC - 61522475 61522488 7.0E-06 GCACTCAAGAGTGA 14
V_SOX7_03_M02807 TRANSFAC - 61517190 61517211 8.0E-06 CCCTTAAGACAATTGTTATTCT 22
V_FOXA2_02_M02853 TRANSFAC + 61517189 61517203 4.0E-06 GAGAATAACAATTGT 15
V_FKLF_Q5_M01837 TRANSFAC + 61517591 61517600 2.0E-06 GGGGTGGGAG 10
V_TCFAP2C_03_M02821 TRANSFAC - 61524245 61524259 6.0E-06 AGTCCCTGAGGCCAA 15
V_HNF4_01_B_M00411 TRANSFAC - 61524459 61524473 1.0E-06 GAGGGCAAAGTCCAA 15
V_COUP_01_M00158 TRANSFAC + 61524460 61524473 7.0E-06 TGGACTTTGCCCTC 14
V_HNF1_Q6_M00790 TRANSFAC - 61524491 61524508 4.0E-06 CAGTTAATAATTTCTGCT 18
V_SOX1_04_M02906 TRANSFAC - 61517191 61517205 1.0E-06 AGACAATTGTTATTC 15
V_E12_Q6_M00693 TRANSFAC + 61515327 61515337 6.0E-06 AGCAGGTGGCG 11
V_KROX_Q6_M00982 TRANSFAC - 61522122 61522135 7.0E-06 TCAGCCCCCACCCC 14
V_KROX_Q6_M00982 TRANSFAC - 61524155 61524168 9.0E-06 CCCACCCCCGCCGC 14
V_ZBP89_Q4_M01816 TRANSFAC + 61517451 61517460 4.0E-06 CCCTCCCCCA 10
V_ZBP89_Q4_M01816 TRANSFAC + 61517550 61517559 4.0E-06 CCCTCCCCCA 10
V_HNF3A_01_M01261 TRANSFAC + 61527360 61527369 5.0E-06 AAGCAAACAT 10
V_MAZ_Q6_01_M02023 TRANSFAC - 61517278 61517291 9.0E-06 GAGGGGGGAGAGGG 14
V_EGR1_Q6_M01873 TRANSFAC + 61517306 61517315 4.0E-06 GCGGGGGCGG 10
V_HNF1_Q6_01_M01011 TRANSFAC - 61524502 61524522 7.0E-06 CCCAGTTAATGATTCAGTTAA 21
V_SREBP_Q6_M01168 TRANSFAC + 61517612 61517626 7.0E-06 CCTCTCACCCCATCC 15
V_SZF11_01_M01109 TRANSFAC - 61524336 61524350 8.0E-06 CCAGGGAAAAGGCCA 15
V_GATA1_09_M02254 TRANSFAC + 61522193 61522203 2.0E-06 AGAGATAAGAG 11
V_RREB1_01_M00257 TRANSFAC - 61522117 61522130 1.0E-05 CCCCACCCCCCAAC 14
V_AP1_C_M00199 TRANSFAC - 61524050 61524058 3.0E-06 ATGAGTCAG 9
V_NCX_02_M01420 TRANSFAC - 61524496 61524512 1.0E-06 GATTCAGTTAATAATTT 17
V_HNF4A_Q6_01_M02016 TRANSFAC - 61524457 61524471 1.0E-06 GGGCAAAGTCCAAGG 15
V_HNF4_DR1_Q3_M00764 TRANSFAC + 61524460 61524472 2.0E-06 TGGACTTTGCCCT 13
V_STAT4_Q5_M02117 TRANSFAC - 61517108 61517117 5.0E-06 TTCTGAGAAA 10
V_AP1_01_M00517 TRANSFAC - 61524048 61524060 2.0E-06 GGATGAGTCAGAC 13
V_SP1_01_M00008 TRANSFAC + 61517178 61517187 7.0E-06 GGGGCAGGGT 10
V_CTCF_02_M01259 TRANSFAC + 61515319 61515338 5.0E-06 CTCTACACAGCAGGTGGCGC 20
V_CTCF_01_M01200 TRANSFAC + 61515321 61515340 1.0E-05 CTACACAGCAGGTGGCGCTG 20
V_CTCF_01_M01200 TRANSFAC + 61520002 61520021 1.0E-06 CGGGCCGGCAGGGGGCGCTG 20
V_SOX9_B1_M00410 TRANSFAC + 61524129 61524142 5.0E-06 TGACAACAATGGGT 14
V_HNF4A_02_M02868 TRANSFAC - 61524456 61524471 1.0E-05 GGGCAAAGTCCAAGGG 16
V_NEUROD_02_M01288 TRANSFAC - 61515323 61515334 9.0E-06 CACCTGCTGTGT 12
V_GLI3_01_M01596 TRANSFAC + 61522306 61522316 7.0E-06 GTGGGTGGCCC 11
V_GLI3_01_M01596 TRANSFAC + 61524518 61524528 5.0E-06 CTGGGTGGCCC 11
V_SP4_Q5_M01273 TRANSFAC + 61517548 61517558 5.0E-06 GCCCCTCCCCC 11
V_HBP1_04_M02866 TRANSFAC + 61517358 61517374 8.0E-06 AAATCCCATTCTATATA 17
V_SOX15_03_M02799 TRANSFAC + 61517190 61517206 2.0E-06 AGAATAACAATTGTCTT 17
V_ZIC2_05_M02940 TRANSFAC + 61515321 61515335 3.0E-06 CTACACAGCAGGTGG 15
V_ALPHACP1_01_M00687 TRANSFAC - 61524442 61524452 0.0E+00 CAGCCAATGAG 11
V_HNF1_01_M00132 TRANSFAC - 61524493 61524507 1.0E-06 AGTTAATAATTTCTG 15
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 61517650 61517658 8.0E-06 GAGGGTGGG 9
V_DR1_Q3_M00762 TRANSFAC - 61524460 61524472 8.0E-06 AGGGCAAAGTCCA 13
V_SIRT6_01_M01797 TRANSFAC + 61522195 61522202 7.0E-06 AGATAAGA 8
V_GATA3_02_M00350 TRANSFAC + 61522193 61522202 1.0E-06 AGAGATAAGA 10
V_NCX_01_M00484 TRANSFAC - 61524363 61524372 1.0E-06 TGGTAATTGG 10
V_HNF4_Q6_01_M01031 TRANSFAC - 61524459 61524472 0.0E+00 AGGGCAAAGTCCAA 14
V_NFY_01_M00287 TRANSFAC - 61524439 61524454 3.0E-06 GGCAGCCAATGAGCAG 16
V_NRSF_01_M00256 TRANSFAC - 61515370 61515390 4.0E-06 GTCAGTGCCGAGGCCAGACTC 21
V_E47_01_M00002 TRANSFAC + 61515325 61515339 5.0E-06 ACAGCAGGTGGCGCT 15
V_ZFP281_01_M01597 TRANSFAC + 61517171 61517181 7.0E-06 TGGAGGAGGGG 11
V_ZFP281_01_M01597 TRANSFAC - 61517450 61517460 1.0E-06 TGGGGGAGGGG 11
V_ZFP281_01_M01597 TRANSFAC - 61517549 61517559 1.0E-06 TGGGGGAGGGG 11
V_ZFP281_01_M01597 TRANSFAC + 61522120 61522130 4.0E-06 GGGGGGTGGGG 11
V_TITF1_Q3_M00432 TRANSFAC + 61522207 61522216 8.0E-06 ACTCAAGAAT 10
V_TITF1_Q3_M00432 TRANSFAC - 61522477 61522486 7.0E-06 ACTCAAGAGT 10
V_EGR1_06_M02744 TRANSFAC - 61517303 61517316 3.0E-06 ACCGCCCCCGCAGG 14
V_TCFAP2A_03_M02819 TRANSFAC - 61524245 61524259 7.0E-06 AGTCCCTGAGGCCAA 15
V_MYF6_03_M02781 TRANSFAC + 61517191 61517206 3.0E-06 GAATAACAATTGTCTT 16
V_ZFP281_04_M02831 TRANSFAC + 61517448 61517462 2.0E-06 ACCCCCTCCCCCAAC 15
V_ZFP281_04_M02831 TRANSFAC + 61517547 61517561 7.0E-06 TGCCCCTCCCCCACG 15
V_ZFP281_04_M02831 TRANSFAC - 61522117 61522131 4.0E-06 CCCCCACCCCCCAAC 15
V_ZFP281_04_M02831 TRANSFAC - 61522293 61522307 7.0E-06 ACACCTTCCCCCATC 15
V_ZFP281_04_M02831 TRANSFAC - 61524091 61524105 1.0E-06 TGCCCACCCCCCACC 15
V_GATA2_03_M00349 TRANSFAC + 61522193 61522202 0.0E+00 AGAGATAAGA 10
V_EWSR1FLI1_01_M02252 TRANSFAC - 61524550 61524567 0.0E+00 GGAAGGTGGGAAGGTAAG 18
V_HNF1A_Q5_M02013 TRANSFAC - 61524497 61524507 0.0E+00 AGTTAATAATT 11
V_HNF1A_Q5_M02013 TRANSFAC - 61524509 61524519 0.0E+00 AGTTAATGATT 11
V_SIX6_08_M02897 TRANSFAC + 61517365 61517381 5.0E-06 ATTCTATATATCTAAGA 17
V_GSC_01_M01428 TRANSFAC + 61517095 61517111 7.0E-06 TAATGTAAATCCGTTTC 17
V_SOX12_03_M02796 TRANSFAC - 61517189 61517202 8.0E-06 CAATTGTTATTCTC 14
V_UF1H3BETA_Q6_M01068 TRANSFAC + 61517169 61517182 1.0E-06 GGTGGAGGAGGGGC 14
V_UF1H3BETA_Q6_M01068 TRANSFAC - 61517449 61517462 2.0E-06 GTTGGGGGAGGGGG 14
V_UF1H3BETA_Q6_M01068 TRANSFAC - 61517548 61517561 1.0E-06 CGTGGGGGAGGGGC 14
V_UF1H3BETA_Q6_M01068 TRANSFAC + 61524157 61524170 4.0E-06 GGCGGGGGTGGGGG 14
V_CP2_01_M00072 TRANSFAC + 61524530 61524540 6.0E-06 GCCCTACCCAG 11
V_HNF4_01_M00134 TRANSFAC - 61524457 61524475 2.0E-06 GGGAGGGCAAAGTCCAAGG 19
V_NFYA_Q5_M02106 TRANSFAC - 61524439 61524452 0.0E+00 CAGCCAATGAGCAG 14
V_BARX1_01_M01340 TRANSFAC + 61517193 61517208 8.0E-06 ATAACAATTGTCTTAA 16
V_GFI1_Q6_01_M02010 TRANSFAC + 61527322 61527331 7.0E-06 CTGAGATTTG 10
V_HNF1A_01_M02162 TRANSFAC - 61524494 61524507 0.0E+00 AGTTAATAATTTCT 14
V_SREBP1_Q5_M01173 TRANSFAC + 61517612 61517626 3.0E-06 CCTCTCACCCCATCC 15
V_RNF96_01_M01199 TRANSFAC + 61519977 61519986 7.0E-06 GCCCGCGGCC 10
V_STAT1_05_M01260 TRANSFAC - 61517099 61517120 5.0E-06 CGATTCTGAGAAACGGATTTAC 22
PPARG_RXRA_MA0065.2 JASPAR - 61524336 61524350 1.0E-05 CCAGGGAAAAGGCCA 15
PPARG_RXRA_MA0065.2 JASPAR - 61524460 61524474 1.0E-05 GGAGGGCAAAGTCCA 15
V_ESR2_01_M02377 TRANSFAC - 61524326 61524343 8.0E-06 AAAGGCCATTCTGCCCTC 18
V_ZIC1_05_M02939 TRANSFAC + 61515321 61515335 2.0E-06 CTACACAGCAGGTGG 15
V_T3RALPHA_Q6_M01724 TRANSFAC - 61527370 61527380 3.0E-06 CTTCAGGTCAG 11
V_GATA1_06_M00347 TRANSFAC + 61522193 61522202 3.0E-06 AGAGATAAGA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL