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CRTAM Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56253 cytotoxic and regulatory T cell molecule chr11 + 122704254 - 122709754 122709254 Transcription Factor Binding Sites   Download all TFBS in the CRTAM promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox17_MA0078.1 JASPAR + 122714171 122714179 2.0E-06 TTCATTGTC 9 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 122714040 122714049 4.0E-06 AACATATGGT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 122714040 122714049 0.0E+00 ACCATATGTT 10 SPIC_ETS_full_monomeric_14_1 SELEX + 122704697 122704710 1.0E-06 TGAAAGAGGAAGTT 14 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 122714096 122714104 7.0E-06 AGAAGTCAA 9 FOXO3_MA0157.1 JASPAR + 122714115 122714122 7.0E-06 TGTAAACA 8 FOXD1_MA0031.1 JASPAR + 122714116 122714123 7.0E-06 GTAAACAT 8 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 122713958 122713974 5.0E-06 GATGACGGTGAAGGTCA 17 TBP_MA0108.2 JASPAR + 122713989 122714003 1.0E-05 ATATATAAAGCAGTC 15 PAX5_PAX_DBD_monomeric_18_1 SELEX + 122714047 122714064 0.0E+00 GGTCATGCATGGATGGAT 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 122714218 122714231 5.0E-06 TATCTGCAAATTAG 14 Esrrb_MA0141.1 JASPAR + 122713963 122713974 9.0E-06 CGGTGAAGGTCA 12 GATA5_GATA_DBD_monomeric_8_1 SELEX + 122714227 122714234 7.0E-06 AGATAAGA 8 POU2F2_POU_DBD_monomeric_11_1 SELEX - 122713982 122713992 6.0E-06 ATATGGAAATG 11 PAX2_PAX_DBD_monomeric_18_1 SELEX + 122714047 122714064 1.0E-06 GGTCATGCATGGATGGAT 18 GATA4_GATA_DBD_monomeric_8_1 SELEX + 122714227 122714234 7.0E-06 AGATAAGA 8 PAX1_PAX_DBD_monomeric_17_1 SELEX + 122714047 122714063 1.0E-06 GGTCATGCATGGATGGA 17 Pax4_MA0068.1 JASPAR + 122709006 122709035 6.0E-06 CAATTTTTGTCACCAACACATCACTCACAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 122704697 122704710 0.0E+00 TGAAAGAGGAAGTT 14 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 122713958 122713974 1.0E-06 GATGACGGTGAAGGTCA 17 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 122714040 122714049 2.0E-06 AACATATGGT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 122714040 122714049 1.0E-06 ACCATATGTT 10 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 122714039 122714050 1.0E-06 TAACATATGGTC 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 122714039 122714050 2.0E-06 GACCATATGTTA 12 SRY_MA0084.1 JASPAR + 122709001 122709009 7.0E-06 TAAAACAAT 9 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 122714040 122714049 1.0E-06 AACATATGGT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 122714040 122714049 1.0E-06 ACCATATGTT 10 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 122713966 122713975 6.0E-06 TGAAGGTCAC 10 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 122714143 122714159 0.0E+00 TTTCGCCTGTGAGGTCA 17 Gata1_MA0035.2 JASPAR + 122714225 122714235 1.0E-06 GCAGATAAGAA 11 GATA3_GATA_full_monomeric_8_1 SELEX + 122714227 122714234 7.0E-06 AGATAAGA 8 PAX9_PAX_DBD_monomeric_17_1 SELEX + 122714047 122714063 1.0E-06 GGTCATGCATGGATGGA 17 EN1_homeodomain_full_dimeric_14_1 SELEX + 122713923 122713936 5.0E-06 TGATAGGACAATTA 14 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 122714040 122714049 1.0E-06 AACATATGGT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 122714040 122714049 2.0E-06 ACCATATGTT 10 POU2F1_POU_DBD_monomeric_12_1 SELEX - 122713982 122713993 7.0E-06 TATATGGAAATG 12 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 122713966 122713976 6.0E-06 TGAAGGTCACA 11 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 122714040 122714049 6.0E-06 AACATATGGT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 122714040 122714049 6.0E-06 ACCATATGTT 10 SPI1_ETS_full_monomeric_14_1 SELEX + 122704697 122704710 0.0E+00 TGAAAGAGGAAGTT 14 FOXB1_forkhead_full_monomeric_9_1 SELEX + 122714115 122714123 3.0E-06 TGTAAACAT 9 IRF3_IRF_full_trimeric_21_1 SELEX - 122713975 122713995 6.0E-06 TATATATGGAAATGGAACCTG 21 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 122713931 122713944 8.0E-06 CCATGAACTAATTG 14 POU3F2_POU_DBD_monomeric_12_1 SELEX - 122714219 122714230 8.0E-06 ATCTGCAAATTA 12 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 122714040 122714049 1.0E-06 AACATATGGT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 122714040 122714049 1.0E-06 ACCATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX + 122714040 122714049 2.0E-06 AACATATGGT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 122714040 122714049 1.0E-06 ACCATATGTT 10 POU4F1_POU_DBD_monomeric_14_1 SELEX - 122704724 122704737 7.0E-06 GTGAATTATTGAAT 14 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 122714040 122714049 2.0E-06 AACATATGGT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 122714040 122714049 1.0E-06 ACCATATGTT 10 V_OBOX6_01_M01445 TRANSFAC - 122714102 122714116 6.0E-06 CAGAATGGATTATTG 15 V_SPI1_01_M01203 TRANSFAC + 122704697 122704713 1.0E-06 TGAAAGAGGAAGTTGAA 17 V_ZFP187_03_M02830 TRANSFAC - 122713931 122713944 5.0E-06 CCATGAACTAATTG 14 V_GATA1_Q6_M02004 TRANSFAC + 122714222 122714236 0.0E+00 TTTGCAGATAAGAAC 15 V_FOXO3_02_M02270 TRANSFAC + 122714115 122714122 7.0E-06 TGTAAACA 8 TAL1_TCF3_MA0091.1 JASPAR + 122714038 122714049 4.0E-06 ATAACATATGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 122714040 122714051 1.0E-06 TGACCATATGTT 12 V_BCL6B_03_M02740 TRANSFAC - 122704709 122704724 4.0E-06 TCTTTCTAAGATTCAA 16 V_SPIB_02_M02041 TRANSFAC + 122704701 122704710 8.0E-06 AGAGGAAGTT 10 V_SPIB_02_M02041 TRANSFAC + 122709215 122709224 8.0E-06 AGAGGAAGTT 10 V_OCT1_01_M00135 TRANSFAC - 122713978 122713996 6.0E-06 TTATATATGGAAATGGAAC 19 V_SOX11_04_M02899 TRANSFAC - 122708999 122709012 4.0E-06 AAAATTGTTTTACC 14 V_GATA_C_M00203 TRANSFAC + 122714227 122714237 0.0E+00 AGATAAGAACT 11 V_DLX2_01_M01468 TRANSFAC + 122713927 122713942 1.0E-06 AGGACAATTAGTTCAT 16 V_PU1_Q4_M01172 TRANSFAC - 122704698 122704716 0.0E+00 AGATTCAACTTCCTCTTTC 19 V_BCL6_02_M01185 TRANSFAC - 122704712 122704725 1.0E-06 ATCTTTCTAAGATT 14 V_HNF6_Q6_M00639 TRANSFAC + 122714096 122714107 1.0E-06 AGAAGTCAATAA 12 V_SOX13_03_M02797 TRANSFAC + 122708999 122709014 9.0E-06 GGTAAAACAATTTTTG 16 V_SOX13_03_M02797 TRANSFAC + 122713924 122713939 4.0E-06 GATAGGACAATTAGTT 16 V_IPF1_Q4_M00436 TRANSFAC + 122714078 122714089 3.0E-06 GAGATAATGACA 12 V_SPI1_03_M02078 TRANSFAC + 122704701 122704710 2.0E-06 AGAGGAAGTT 10 V_SPI1_03_M02078 TRANSFAC + 122709215 122709224 2.0E-06 AGAGGAAGTT 10 V_MYCMAX_02_M00123 TRANSFAC - 122713893 122713904 7.0E-06 AAGCACATGTGA 12 V_TATA_01_M00252 TRANSFAC + 122713989 122714003 1.0E-05 ATATATAAAGCAGTC 15 V_PAX9_B_M00329 TRANSFAC + 122714048 122714071 9.0E-06 GTCATGCATGGATGGATGAATTCA 24 V_GSH2_01_M01326 TRANSFAC + 122713927 122713942 3.0E-06 AGGACAATTAGTTCAT 16 V_SOX18_03_M02801 TRANSFAC - 122708998 122709013 5.0E-06 AAAAATTGTTTTACCA 16 V_TATA_C_M00216 TRANSFAC + 122709174 122709183 5.0E-06 CCTTTAAAAG 10 V_ELF5_01_M01197 TRANSFAC + 122704700 122704710 1.0E-05 AAGAGGAAGTT 11 V_OCT1_04_M00138 TRANSFAC - 122713976 122713998 7.0E-06 CTTTATATATGGAAATGGAACCT 23 V_HBP1_03_M02762 TRANSFAC - 122714163 122714178 4.0E-06 ACAATGAATGACTGTG 16 V_SPIB_01_M01204 TRANSFAC + 122704697 122704713 2.0E-06 TGAAAGAGGAAGTTGAA 17 V_GATA1_09_M02254 TRANSFAC + 122714225 122714235 1.0E-06 GCAGATAAGAA 11 V_STAT4_Q5_M02117 TRANSFAC + 122709177 122709186 2.0E-06 TTAAAAGAAA 10 V_ELF1_Q6_M00746 TRANSFAC + 122704698 122704709 0.0E+00 GAAAGAGGAAGT 12 V_ZFP105_04_M02931 TRANSFAC + 122704721 122704737 3.0E-06 AAGATTCAATAATTCAC 17 V_T3R_01_M00239 TRANSFAC + 122709144 122709159 8.0E-06 ACATGAGGTCACAGAT 16 V_T3R_01_M00239 TRANSFAC - 122714138 122714153 5.0E-06 CTGTGAGGTCACCACT 16 V_GATA1_04_M00128 TRANSFAC + 122714224 122714236 3.0E-06 TGCAGATAAGAAC 13 V_SIRT6_01_M01797 TRANSFAC + 122714227 122714234 7.0E-06 AGATAAGA 8 V_FOXJ3_06_M02855 TRANSFAC + 122714032 122714048 8.0E-06 AATCTCATAACATATGG 17 V_ERR1_Q2_M00511 TRANSFAC + 122713963 122713976 9.0E-06 CGGTGAAGGTCACA 14 V_ERR2_01_M01589 TRANSFAC + 122713966 122713977 7.0E-06 TGAAGGTCACAG 12 V_SPIC_02_M02077 TRANSFAC + 122704701 122704710 1.0E-06 AGAGGAAGTT 10 V_SPIC_02_M02077 TRANSFAC + 122709215 122709224 1.0E-06 AGAGGAAGTT 10 V_TBX5_Q5_M01044 TRANSFAC + 122709029 122709038 9.0E-06 CTCACACCTC 10 V_VAX1_01_M01397 TRANSFAC + 122713927 122713942 7.0E-06 AGGACAATTAGTTCAT 16 V_SOX18_04_M02905 TRANSFAC - 122714060 122714075 2.0E-06 TGACTGAATTCATCCA 16 V_YY1_01_M00059 TRANSFAC + 122713982 122713998 1.0E-06 CATTTCCATATATAAAG 17 V_NKX12_01_M01427 TRANSFAC + 122713925 122713941 7.0E-06 ATAGGACAATTAGTTCA 17 V_BSX_01_M01442 TRANSFAC + 122713927 122713942 1.0E-06 AGGACAATTAGTTCAT 16 V_SRY_05_M02917 TRANSFAC + 122708998 122709014 5.0E-06 TGGTAAAACAATTTTTG 17 V_HOXD3_01_M01338 TRANSFAC - 122713927 122713942 9.0E-06 ATGAACTAATTGTCCT 16 V_GATA5_03_M02756 TRANSFAC + 122714222 122714238 3.0E-06 TTTGCAGATAAGAACTC 17 V_SOX5_07_M02909 TRANSFAC - 122708999 122709015 2.0E-06 ACAAAAATTGTTTTACC 17 V_GATA6_04_M02757 TRANSFAC + 122714222 122714238 6.0E-06 TTTGCAGATAAGAACTC 17 V_BARX1_01_M01340 TRANSFAC + 122713927 122713942 4.0E-06 AGGACAATTAGTTCAT 16 V_OBOX6_02_M03068 TRANSFAC - 122714102 122714116 6.0E-06 CAGAATGGATTATTG 15 V_GBX1_01_M01371 TRANSFAC - 122713926 122713942 7.0E-06 ATGAACTAATTGTCCTA 17 V_HOXB5_01_M01319 TRANSFAC + 122713927 122713942 7.0E-06 AGGACAATTAGTTCAT 16 V_SPI1_02_M02043 TRANSFAC + 122704701 122704710 6.0E-06 AGAGGAAGTT 10 V_SPI1_02_M02043 TRANSFAC + 122709215 122709224 6.0E-06 AGAGGAAGTT 10 V_PAX6_01_M00097 TRANSFAC + 122714044 122714064 5.0E-06 TATGGTCATGCATGGATGGAT 21 V_SPIB_03_M02076 TRANSFAC + 122704701 122704710 2.0E-06 AGAGGAAGTT 10 V_SPIB_03_M02076 TRANSFAC + 122709215 122709224 2.0E-06 AGAGGAAGTT 10 V_OCT4_01_M01125 TRANSFAC - 122713983 122713997 6.0E-06 TTTATATATGGAAAT 15 V_IPF1_06_M01438 TRANSFAC + 122713927 122713942 6.0E-06 AGGACAATTAGTTCAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.