CLOCK target genes for motif:CLOCK_bHLH_DBD_dimeric_10_1
The CLOCK_bHLH_DBD_dimeric_10_1 motif was discovered for CLOCK and was found in the SELEX repository.
CLOCK motif sequence logo |
CLOCK motif positions |
CLOCK target gene list
Download all CLOCK TF binding sites
| Gene | Entrez | # of Sites | Strand | Chromosome | Promoter Location | TSS |
|---|
| ZNF710 |
374655 |
2 |
chr15 |
+ |
90539751-90545251 |
90544751 |
| CENPL |
91687 |
1 |
chr1 |
- |
173792770-173798777 |
173793270 |
| COL16A1 |
1307 |
1 |
chr1 |
- |
32169268-32174768 |
32169768 |
| APITD1 |
378708 |
1 |
chr1 |
+ |
10485158-10490658 |
10490158 |
| DNAJA2 |
10294 |
1 |
chr16 |
- |
47007125-47012625 |
47007625 |
| KIF16B |
55614 |
2 |
chr20 |
- |
16553579-16559079 |
16554079 |
| C6orf225 |
619208 |
1 |
chr6 |
+ |
112403673-112409173 |
112408673 |
| BNIP1 |
662 |
1 |
chr5 |
+ |
172566444-172571944 |
172571444 |
| EPM2A |
7957 |
2 |
chr6 |
- |
146056491-146061991 |
146056991 |
| RBM15 |
64783 |
2 |
chr1 |
+ |
110876944-110882444 |
110881944 |
| LARP1 |
23367 |
2 |
chr5 |
+ |
154087461-154092961 |
154092461 |
| PTH1R |
5745 |
2 |
chr3 |
+ |
46914235-46924238 |
46923738 |
| ZFAND3 |
60685 |
1 |
chr6 |
+ |
37782306-37787806 |
37787306 |
| C22orf29 |
79680 |
2 |
chr22 |
- |
19841871-19847371 |
19842371 |
| NR4A3 |
8013 |
1 |
chr9 |
+ |
102579136-102584636 |
102584136 |
| MEN1 |
4221 |
2 |
chr11 |
- |
64577535-64583766 |
64578035 |
| MEOX1 |
4222 |
1 |
chr17 |
- |
41738431-41744262 |
41738931 |
| MINOS1 |
440574 |
2 |
chr1 |
+ |
19918470-19923970 |
19923470 |
| PRKCH |
5583 |
1 |
chr14 |
+ |
61783514-61789014 |
61788514 |
| DNASE1 |
1773 |
2 |
chr16 |
+ |
3697939-3703439 |
3702939 |
| NKAIN4 |
128414 |
1 |
chr20 |
- |
61885392-61890892 |
61885892 |
| MAT2A |
4144 |
1 |
chr2 |
+ |
85761100-85766600 |
85766100 |
| FAM46C |
54855 |
2 |
chr1 |
+ |
118143603-118149103 |
118148603 |
| ANKS1B |
56899 |
1 |
chr12 |
- |
100377932-100383432 |
100378432 |
| ANKRD49 |
54851 |
1 |
chr11 |
+ |
94222152-94227652 |
94227152 |
| FBLIM1 |
54751 |
2 |
chr1 |
+ |
16080254-16085754 |
16085254 |
| RBM47 |
54502 |
2 |
chr4 |
- |
40631383-40636883 |
40631883 |
| C21orf56 |
84221 |
2 |
chr21 |
- |
47603873-47609373 |
47604373 |
| SYS1-DBNDD2 |
90196 |
2 |
chr20 |
+ |
43985576-43992239 |
43991739 |
| CHCHD6 |
84303 |
2 |
chr3 |
+ |
126418062-126423562 |
126423062 |
| FADS3 |
3995 |
1 |
chr11 |
- |
61658506-61664006 |
61659006 |
| ~ |
84301 |
2 |
chr1 |
+ |
15938952-15944452 |
15943952 |
| CLDN12 |
9069 |
1 |
chr7 |
+ |
90027647-90033147 |
90032647 |
| METRNL |
284207 |
1 |
chr17 |
+ |
81032566-81038066 |
81037566 |
| TTBK1 |
84630 |
1 |
chr6 |
+ |
43206221-43211721 |
43211221 |
| LBR |
3930 |
2 |
chr1 |
- |
225615315-225621557 |
225615815 |
| FAM116B |
414918 |
1 |
chr22 |
- |
50764989-50770489 |
50765489 |
| HIST1H2AJ |
8331 |
1 |
chr6 |
- |
27782018-27787518 |
27782518 |
| CHCHD4 |
131474 |
1 |
chr3 |
- |
14165871-14171371 |
14166371 |
| TMPRSS9 |
360200 |
1 |
chr19 |
+ |
2384783-2390283 |
2389783 |
| DNAJC6 |
9829 |
2 |
chr1 |
+ |
65725376-65730876 |
65730376 |
| KIAA2013 |
90231 |
2 |
chr1 |
- |
11985985-11991485 |
11986485 |
| RNF114 |
55905 |
1 |
chr20 |
+ |
48547913-48553413 |
48552913 |
| ADM |
133 |
2 |
chr11 |
+ |
10321641-10327141 |
10326641 |
| IFI44L |
10964 |
2 |
chr1 |
+ |
79081087-79086587 |
79086087 |
| SALL1 |
6299 |
1 |
chr16 |
- |
51184008-51190183 |
51184508 |
| UBC |
7316 |
2 |
chr12 |
- |
125399087-125404587 |
125399587 |
| AP4E1 |
23431 |
2 |
chr15 |
+ |
51195868-51201368 |
51200868 |
| ARF4 |
378 |
2 |
chr3 |
- |
57582715-57588215 |
57583215 |
| TUBE1 |
51175 |
1 |
chr6 |
- |
112408251-112413751 |
112408751 |
| NUDT16 |
131870 |
2 |
chr3 |
+ |
131095514-131101108 |
131100608 |
| TBX5 |
6910 |
1 |
chr12 |
- |
114843468-114851247 |
114843968 |
| LAPTM4B |
55353 |
2 |
chr8 |
+ |
98782808-98788308 |
98787808 |
| MLH3 |
27030 |
2 |
chr14 |
- |
75517735-75523235 |
75518235 |
| CCND1 |
595 |
2 |
chr11 |
+ |
69450872-69456372 |
69455872 |
| CCDC6 |
8030 |
1 |
chr10 |
- |
61665914-61671414 |
61666414 |
| AOAH |
313 |
2 |
chr7 |
- |
36763654-36769154 |
36764154 |
| KANSL1L |
151050 |
1 |
chr2 |
- |
211035551-211041051 |
211036051 |
| AGL |
178 |
2 |
chr1 |
+ |
100310639-100317030 |
100316530 |
| LZTS2 |
84445 |
1 |
chr10 |
+ |
102751863-102757363 |
102756863 |
| C2orf50 |
130813 |
1 |
chr2 |
+ |
11268178-11273678 |
11273178 |
| PAPD5 |
64282 |
2 |
chr16 |
+ |
50181828-50187328 |
50186828 |
| SEMA3C |
10512 |
1 |
chr7 |
- |
80548167-80553667 |
80548667 |
| ITGA5 |
3678 |
1 |
chr12 |
- |
54812550-54818050 |
54813050 |
| AACS |
65985 |
2 |
chr12 |
+ |
125544924-125550424 |
125549924 |
| GAA |
2548 |
2 |
chr17 |
+ |
78070354-78075854 |
78075354 |
| SDC2 |
6383 |
2 |
chr8 |
+ |
97500881-97506381 |
97505881 |
| ME2 |
4200 |
2 |
chr18 |
+ |
48400431-48405931 |
48405431 |
| VPS29 |
51699 |
2 |
chr12 |
- |
110939416-110944916 |
110939916 |
| MTRR |
4552 |
1 |
chr5 |
+ |
7864216-7869716 |
7869216 |
| SCO2 |
9997 |
1 |
chr22 |
- |
50963533-50969868 |
50964033 |
| ING5 |
84289 |
1 |
chr2 |
+ |
242636455-242641955 |
242641455 |
| UBR5 |
51366 |
2 |
chr8 |
- |
103424417-103429917 |
103424917 |
| COG1 |
9382 |
1 |
chr17 |
+ |
71184172-71189672 |
71189172 |
| GNB1 |
2782 |
1 |
chr1 |
- |
1822026-1827526 |
1822526 |
| CHD9 |
80205 |
2 |
chr16 |
+ |
53083944-53089444 |
53088944 |
| HHIPL2 |
79802 |
2 |
chr1 |
- |
222720944-222726444 |
222721444 |
| TMEM175 |
84286 |
1 |
chr4 |
+ |
921261-926761 |
926261 |
| ZNF639 |
51193 |
2 |
chr3 |
+ |
179036550-179042050 |
179041550 |
| CENPM |
79019 |
1 |
chr22 |
- |
42342648-42348148 |
42343148 |
| CNDP2 |
55748 |
2 |
chr18 |
+ |
72158499-72167322 |
72166822 |
| MATR3 |
9782 |
1 |
chr5 |
+ |
138604440-138609940 |
138609440 |
| ERG |
2078 |
1 |
chr21 |
- |
40032091-40038704 |
40032591 |
| MYBBP1A |
10514 |
1 |
chr17 |
- |
4458181-4463681 |
4458681 |
| CDCA4 |
55038 |
2 |
chr14 |
- |
105486925-105492425 |
105487425 |
| ~ |
100532736 |
2 |
chr1 |
+ |
19918470-19923970 |
19923470 |
| APITD1-CORT |
100526739 |
1 |
chr1 |
+ |
10485158-10491303 |
10490803 |
| PIGH |
5283 |
2 |
chr14 |
- |
68066517-68072017 |
68067017 |
| HAUS8 |
93323 |
1 |
chr19 |
- |
17185843-17191343 |
17186343 |
| KIAA1407 |
57577 |
1 |
chr3 |
- |
113774960-113780460 |
113775460 |
| USP31 |
57478 |
2 |
chr16 |
- |
23160091-23165591 |
23160591 |
| HSPBAP1 |
79663 |
1 |
chr3 |
- |
122512166-122517666 |
122512666 |
| LEPR |
3953 |
2 |
chr1 |
+ |
65881334-65886834 |
65886334 |
| HOXA2 |
3199 |
1 |
chr7 |
- |
27141894-27147394 |
27142394 |
| MDM4 |
4194 |
1 |
chr1 |
+ |
204480506-204486006 |
204485506 |
| PER2 |
8864 |
1 |
chr2 |
- |
239196707-239202207 |
239197207 |
| HEY2 |
23493 |
1 |
chr6 |
+ |
126065731-126071231 |
126070731 |
| FAM176C |
59271 |
2 |
chr21 |
+ |
33779751-33785251 |
33784751 |
| FAM173A |
65990 |
2 |
chr16 |
+ |
766141-771641 |
771141 |
| INO80 |
54617 |
1 |
chr15 |
- |
41407840-41413340 |
41408340 |
| ZEB1 |
6935 |
2 |
chr10 |
+ |
31603100-31610563 |
31610063 |
| BCMO1 |
53630 |
2 |
chr16 |
+ |
81267295-81272795 |
81272295 |
| HSPA8 |
3312 |
1 |
chr11 |
- |
122932401-122937901 |
122932901 |
| IKBKE |
9641 |
1 |
chr1 |
+ |
206638585-206644085 |
206643585 |
| ~ |
8357 |
1 |
chr6 |
+ |
27772841-27778341 |
27777841 |
| USP46 |
64854 |
2 |
chr4 |
- |
53522259-53530502 |
53522759 |
| HIST1H2AH |
85235 |
2 |
chr6 |
+ |
27109860-27115360 |
27114860 |
| WDR43 |
23160 |
1 |
chr2 |
+ |
29112532-29118032 |
29117532 |
| QTRTD1 |
79691 |
1 |
chr3 |
+ |
113770581-113776081 |
113775581 |
| ZNF691 |
51058 |
2 |
chr1 |
+ |
43307243-43312743 |
43312243 |
| LSM1 |
27257 |
1 |
chr8 |
- |
38033748-38039248 |
38034248 |
| KLHDC8B |
200942 |
2 |
chr3 |
+ |
49204017-49209517 |
49209017 |
| PHYHIP |
9796 |
1 |
chr8 |
- |
22089351-22094851 |
22089851 |
| TMEM154 |
201799 |
1 |
chr4 |
- |
153600817-153606317 |
153601317 |
| C17orf53 |
78995 |
2 |
chr17 |
+ |
42214273-42219773 |
42219273 |
| TMCO3 |
55002 |
2 |
chr13 |
+ |
114140307-114145807 |
114145307 |
| GOLIM4 |
27333 |
1 |
chr3 |
- |
167812917-167818417 |
167813417 |
| WDR90 |
197335 |
1 |
chr16 |
+ |
694362-699862 |
699362 |
| ATF7 |
11016 |
1 |
chr12 |
- |
54019280-54025199 |
54019780 |
| C4orf36 |
132989 |
2 |
chr4 |
- |
87813075-87818575 |
87813575 |
| SUPV3L1 |
6832 |
1 |
chr10 |
+ |
70934992-70940492 |
70939992 |
| ~ |
255403 |
1 |
chr4 |
+ |
48276-53776 |
53276 |
| LINGO1 |
84894 |
1 |
chr15 |
- |
77924209-77929709 |
77924709 |
| ING3 |
54556 |
1 |
chr7 |
+ |
120585816-120591316 |
120590816 |
| COX18 |
285521 |
1 |
chr4 |
- |
73934972-73940472 |
73935472 |
| KHDRBS1 |
10657 |
2 |
chr1 |
+ |
32474294-32479794 |
32479294 |
| SLMO1 |
10650 |
2 |
chr18 |
+ |
12402894-12408394 |
12407894 |
| BAG4 |
9530 |
1 |
chr8 |
+ |
38029105-38034605 |
38034105 |
| GTF3C4 |
9329 |
2 |
chr9 |
+ |
135540727-135546227 |
135545727 |
| EDNRA |
1909 |
1 |
chr4 |
+ |
148397068-148402568 |
148402068 |
| CACNG6 |
59285 |
2 |
chr19 |
+ |
54490541-54496041 |
54495541 |
| HIST1H2BM |
8342 |
1 |
chr6 |
+ |
27777821-27783321 |
27782821 |
| SLC27A1 |
376497 |
1 |
chr19 |
+ |
17576299-17581799 |
17581299 |
| OTUB2 |
78990 |
2 |
chr14 |
+ |
94487723-94493223 |
94492723 |
| SRSF7 |
6432 |
1 |
chr2 |
- |
38978136-38983636 |
38978636 |
| GABRB2 |
2561 |
2 |
chr5 |
- |
160974630-160980130 |
160975130 |
| SBNO2 |
22904 |
1 |
chr19 |
- |
1173782-1179282 |
1174282 |
| PABPC1 |
26986 |
1 |
chr8 |
- |
101733815-101739315 |
101734315 |
| S100A11 |
6282 |
2 |
chr1 |
- |
152009011-152014511 |
152009511 |
| TMEM5 |
10329 |
2 |
chr12 |
+ |
64168636-64174136 |
64173636 |
| TMEM43 |
79188 |
1 |
chr3 |
+ |
14161439-14166939 |
14166439 |
| DARS2 |
55157 |
1 |
chr1 |
+ |
173788796-173794296 |
173793796 |
| SLAMF6 |
114836 |
2 |
chr1 |
- |
160492552-160498052 |
160493052 |
| RNF149 |
284996 |
1 |
chr2 |
- |
101924678-101930178 |
101925178 |
| GAK |
2580 |
1 |
chr4 |
- |
925674-931174 |
926174 |
| PGM2 |
55276 |
2 |
chr4 |
+ |
37823281-37828781 |
37828281 |
| USP35 |
57558 |
2 |
chr11 |
+ |
77894857-77900357 |
77899857 |
| LRRC59 |
55379 |
1 |
chr17 |
- |
48474414-48479914 |
48474914 |
| EPB41L4B |
54566 |
1 |
chr9 |
- |
112082521-112088021 |
112083021 |
| TOR1A |
1861 |
2 |
chr9 |
- |
132585941-132591441 |
132586441 |
| KCTD21 |
283219 |
2 |
chr11 |
- |
77899164-77904664 |
77899664 |
| NFIA |
4774 |
1 |
chr1 |
+ |
61537945-61548479 |
61547979 |
| SLC4A2 |
6522 |
2 |
chr7 |
+ |
150750298-150760238 |
150759738 |
| LAPTM4A |
9741 |
2 |
chr2 |
- |
20251289-20256789 |
20251789 |
| CFD |
1675 |
1 |
chr19 |
+ |
854664-860164 |
859664 |
| PRDX6 |
9588 |
1 |
chr1 |
+ |
173441485-173446985 |
173446485 |
| ANKRD13A |
88455 |
2 |
chr12 |
+ |
110432234-110437734 |
110437234 |
| NAA10 |
8260 |
1 |
chrX |
- |
153200107-153205607 |
153200607 |
| GALNTL4 |
374378 |
2 |
chr11 |
- |
11643061-11648561 |
11643561 |
| DCTPP1 |
79077 |
1 |
chr16 |
- |
30440873-30446373 |
30441373 |
| ANKRD37 |
353322 |
2 |
chr4 |
+ |
186312839-186318339 |
186317839 |
| CDK5 |
1020 |
2 |
chr7 |
- |
150754552-150760052 |
150755052 |
| FASTKD3 |
79072 |
1 |
chr5 |
- |
7868650-7874150 |
7869150 |
| SLC35D3 |
340146 |
2 |
chr6 |
+ |
137238401-137243901 |
137243401 |
| HIST1H2BK |
85236 |
2 |
chr6 |
- |
27114137-27119637 |
27114637 |
| SNED1 |
25992 |
2 |
chr2 |
+ |
241933254-241938754 |
241938254 |
| CENPV |
201161 |
1 |
chr17 |
- |
16256312-16261812 |
16256812 |
| POLB |
5423 |
1 |
chr8 |
+ |
42190972-42196472 |
42195972 |
| HKDC1 |
80201 |
1 |
chr10 |
+ |
70975058-70980558 |
70980058 |
| DHRS12 |
79758 |
2 |
chr13 |
- |
52377798-52383298 |
52378298 |
| CCDC71 |
64925 |
2 |
chr3 |
- |
49203285-49208785 |
49203785 |
| MYSM1 |
114803 |
1 |
chr1 |
- |
59165247-59170747 |
59165747 |
| SYNCRIP |
10492 |
2 |
chr6 |
- |
86350669-86358043 |
86351169 |
| ~ |
152687 |
1 |
chr4 |
+ |
48226-53726 |
53226 |
| MYO9B |
4650 |
1 |
chr19 |
+ |
17181590-17187090 |
17186590 |
| DCUN1D2 |
55208 |
2 |
chr13 |
- |
114144523-114150023 |
114145023 |
| EPS8L1 |
54869 |
1 |
chr19 |
+ |
55582220-55592259 |
55591759 |
| MRE11A |
4361 |
1 |
chr11 |
- |
94226540-94232040 |
94227040 |
| CCK |
885 |
2 |
chr3 |
- |
42304939-42310439 |
42305439 |
| MOB3B |
79817 |
2 |
chr9 |
- |
27529350-27534850 |
27529850 |
| NEUROD2 |
4761 |
1 |
chr17 |
- |
37763675-37769175 |
37764175 |
| WIPF3 |
644150 |
1 |
chr7 |
+ |
29841169-29846669 |
29846169 |
| SLAMF1 |
6504 |
2 |
chr1 |
- |
160616581-160622081 |
160617081 |
| MAGI1 |
9223 |
1 |
chr3 |
- |
66024009-66029509 |
66024509 |
| MAP6D1 |
79929 |
2 |
chr3 |
- |
183542893-183548393 |
183543393 |
| SET |
6418 |
2 |
chr9 |
+ |
131440933-131452753 |
131452253 |
| FAM124B |
79843 |
2 |
chr2 |
- |
225266211-225271711 |
225266711 |
| TYMP |
1890 |
1 |
chr22 |
- |
50968014-50973514 |
50968514 |
| KIF6 |
221458 |
1 |
chr6 |
- |
39692681-39698181 |
39693181 |
| IGSF22 |
283284 |
2 |
chr11 |
- |
18747277-18752777 |
18747777 |
| MYL10 |
93408 |
2 |
chr7 |
- |
101272076-101277576 |
101272576 |
| HERC1 |
8925 |
2 |
chr15 |
- |
64125647-64131147 |
64126147 |
| PRDX4 |
10549 |
1 |
chrX |
+ |
23680644-23686144 |
23685644 |
| PTPRZ1 |
5803 |
1 |
chr7 |
+ |
121508158-121513658 |
121513158 |
| PDIA4 |
9601 |
2 |
chr7 |
- |
148725282-148730782 |
148725782 |
| LAMC1 |
3915 |
3 |
chr1 |
+ |
182987594-182993094 |
182992594 |
| DDX31 |
64794 |
2 |
chr9 |
- |
135545288-135550788 |
135545788 |
| CA12 |
771 |
2 |
chr15 |
- |
63673575-63679075 |
63674075 |
| ZSCAN2 |
54993 |
2 |
chr15 |
+ |
85139248-85144748 |
85144248 |
| HBP1 |
26959 |
1 |
chr7 |
+ |
106804405-106809959 |
106809459 |
| CCDC78 |
124093 |
2 |
chr16 |
- |
775973-781473 |
776473 |
| RNASEH2B |
79621 |
2 |
chr13 |
+ |
51478813-51484313 |
51483813 |
| ODF3B |
440836 |
1 |
chr22 |
- |
50970508-50976008 |
50971008 |
| NMNAT2 |
23057 |
1 |
chr1 |
- |
183387134-183392634 |
183387634 |
| ENPP7 |
339221 |
1 |
chr17 |
+ |
77699881-77705381 |
77704881 |
| ADRA1A |
148 |
2 |
chr8 |
- |
26722422-26727922 |
26722922 |
| SLFN5 |
162394 |
1 |
chr17 |
+ |
33565085-33570585 |
33570085 |
| ~ |
100130370 |
1 |
chr17 |
- |
79358660-79364160 |
79359160 |
| ZNF839 |
55778 |
2 |
chr14 |
+ |
102778713-102786587 |
102786087 |
| TDRD3 |
81550 |
2 |
chr13 |
+ |
60965590-60971926 |
60971426 |
| TNFRSF10D |
8793 |
2 |
chr8 |
- |
23021043-23026543 |
23021543 |
| GTF3C2 |
2976 |
1 |
chr2 |
- |
27579368-27584868 |
27579868 |
| GNB1L |
54584 |
2 |
chr22 |
- |
19841962-19847462 |
19842462 |
| CARHSP1 |
23589 |
2 |
chr16 |
- |
8961748-8967863 |
8962248 |
| OAS1 |
4938 |
2 |
chr12 |
+ |
113339738-113345238 |
113344738 |
| EIF4EBP1 |
1978 |
2 |
chr8 |
+ |
37883019-37888519 |
37888019 |
| C16orf80 |
29105 |
1 |
chr16 |
- |
58162796-58168296 |
58163296 |
| PITPNB |
23760 |
2 |
chr22 |
- |
28314755-28320255 |
28315255 |
| FAM90A1 |
55138 |
2 |
chr12 |
- |
8379714-8385214 |
8380214 |
| POP7 |
10248 |
2 |
chr7 |
+ |
100298675-100304175 |
100303675 |
| RPL11 |
6135 |
1 |
chr1 |
+ |
24013268-24018768 |
24018268 |
| SMG7 |
9887 |
1 |
chr1 |
+ |
183436505-183442005 |
183441505 |
| ELF5 |
2001 |
1 |
chr11 |
- |
34532846-34540347 |
34533346 |
| RAD9B |
144715 |
2 |
chr12 |
+ |
110935004-110940504 |
110940004 |
| ATP1A2 |
477 |
1 |
chr1 |
+ |
160080519-160086019 |
160085519 |
| LEPROT |
54741 |
2 |
chr1 |
+ |
65881130-65886898 |
65886398 |
| DIRC2 |
84925 |
1 |
chr3 |
+ |
122508900-122514400 |
122513900 |
| PTDSS2 |
81490 |
1 |
chr11 |
+ |
445279-450779 |
450279 |
| HSP90B1 |
7184 |
1 |
chr12 |
+ |
104319111-104324611 |
104324111 |
| NANOS1 |
340719 |
1 |
chr10 |
+ |
120784227-120789727 |
120789227 |
| CLIC4 |
25932 |
2 |
chr1 |
+ |
25066759-25072259 |
25071759 |
| CDKN2D |
1032 |
2 |
chr19 |
- |
10679131-10684655 |
10679631 |
|
