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FAM90A1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55138 family with sequence similarity 90, member A1 chr12 - 8379714 - 8385214 8380214 Transcription Factor Binding Sites   Download all TFBS in the FAM90A1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 8384489 8384507 2.0E-06 CATTCACCAGGTGGCACCA 19 SP8_C2H2_DBD_monomeric_12_1 SELEX - 8380252 8380263 7.0E-06 GACACTCCCCCT 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 8380274 8380285 1.0E-06 GGCCACGTGGCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 8380274 8380285 0.0E+00 TGCCACGTGGCC 12 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 8380253 8380263 1.0E-05 GACACTCCCCC 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 8384847 8384858 4.0E-06 TCCAAAAATAGC 12 MAX_bHLH_DBD_dimeric_10_1 SELEX - 8385214 8385223 2.0E-06 AACACGTGCT 1 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 8384847 8384858 5.0E-06 TCCAAAAATAGC 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 8384669 8384680 5.0E-06 AGACAGGTGACA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 8384669 8384680 8.0E-06 AGACAGGTGACA 12 CLOCK_bHLH_DBD_dimeric_10_1 SELEX + 8385214 8385223 8.0E-06 AGCACGTGTT 1 CLOCK_bHLH_DBD_dimeric_10_1 SELEX - 8385214 8385223 4.0E-06 AACACGTGCT 1 MEF2B_MADS_full_dimeric_12_1 SELEX - 8384847 8384858 4.0E-06 TCCAAAAATAGC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 8384669 8384680 6.0E-06 AGACAGGTGACA 12 MEF2A_MA0052.1 JASPAR + 8384848 8384857 8.0E-06 CTATTTTTGG 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX - 8379727 8379736 9.0E-06 AAAAATTAAA 10 MNT_bHLH_DBD_dimeric_10_1 SELEX - 8385214 8385223 1.0E-06 AACACGTGCT 1 SRY_MA0084.1 JASPAR + 8384987 8384995 5.0E-06 TTTAACAAT 9 YY2_C2H2_full_monomeric_11_1 SELEX + 8380076 8380086 7.0E-06 CCCGCCATGTT 11 MZF1_5-13_MA0057.1 JASPAR + 8379799 8379808 4.0E-06 GGAGGGGGAA 10 Foxd3_MA0041.1 JASPAR - 8384985 8384996 8.0E-06 GATTGTTAAATT 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 8385002 8385009 1.0E-05 ACATTCCA 8 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 8380274 8380285 2.0E-06 TGCCACGTGGCC 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 8384669 8384680 3.0E-06 AGACAGGTGACA 12 E2F2_E2F_DBD_dimeric_18_1 SELEX - 8384850 8384867 8.0E-06 AATTCTGGCTCCAAAAAT 18 E2F3_E2F_DBD_dimeric_18_3 SELEX + 8384850 8384867 1.0E-06 ATTTTTGGAGCCAGAATT 18 E2F3_E2F_DBD_dimeric_18_3 SELEX - 8384850 8384867 3.0E-06 AATTCTGGCTCCAAAAAT 18 V_FOXP1_01_M00987 TRANSFAC + 8384876 8384895 2.0E-06 TGATTTATGGTGCTTTTCTT 20 V_AP1_Q2_M00173 TRANSFAC + 8379786 8379796 4.0E-06 GATGACTCAGT 11 V_E2A_Q6_01_M02088 TRANSFAC + 8379842 8379854 1.0E-06 GGCCAGCTGCTGG 13 V_USF_Q6_M00187 TRANSFAC + 8380275 8380284 9.0E-06 GCCACGTGGC 10 V_USF_Q6_M00187 TRANSFAC - 8380275 8380284 9.0E-06 GCCACGTGGC 10 V_EVI1_05_M00082 TRANSFAC - 8384947 8384957 5.0E-06 TAATAAGATAT 11 V_OSF2_Q6_M00731 TRANSFAC - 8384966 8384973 1.0E-05 ACCACAAA 8 V_XPF1_Q6_M00684 TRANSFAC + 8384772 8384781 3.0E-06 TCTGAGGAAC 10 V_SIX6_02_M01398 TRANSFAC - 8384940 8384956 4.0E-06 AATAAGATATCAGCTGT 17 V_HMGIY_Q3_M01010 TRANSFAC + 8379725 8379739 1.0E-05 CTTTTAATTTTTCAA 15 V_MTF1_Q4_M00650 TRANSFAC - 8380134 8380147 8.0E-06 TGTGCACCCTGACC 14 V_FOXD3_01_M00130 TRANSFAC - 8384985 8384996 6.0E-06 GATTGTTAAATT 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 8379725 8379736 7.0E-06 AAAAATTAAAAG 12 V_AML3_Q6_M01856 TRANSFAC - 8384967 8384974 1.0E-05 AACCACAA 8 V_ETS_B_M00340 TRANSFAC - 8384554 8384567 1.0E-06 GACAGGAAGCGTTT 14 V_MAFB_03_M02879 TRANSFAC - 8379728 8379742 1.0E-05 CGTTTGAAAAATTAA 15 V_MEF2_02_M00231 TRANSFAC - 8384843 8384864 0.0E+00 TCTGGCTCCAAAAATAGCATTT 22 V_HTF_01_M00538 TRANSFAC + 8384812 8384835 1.0E-05 CTTGATACACACGTTTTTATTTGC 24 V_CMYC_02_M01154 TRANSFAC - 8380274 8380285 5.0E-06 TGCCACGTGGCC 12 V_AP1_Q6_M00174 TRANSFAC + 8379786 8379796 0.0E+00 GATGACTCAGT 11 V_ETS_Q4_M00771 TRANSFAC + 8384554 8384565 1.0E-05 AAACGCTTCCTG 12 V_GC_01_M00255 TRANSFAC + 8379827 8379840 3.0E-06 AAGAGGCGGGGTCT 14 V_RFXDC2_04_M02894 TRANSFAC - 8384655 8384671 4.0E-06 ACACCTGGATACCAAAT 17 V_MYCMAX_01_M00118 TRANSFAC + 8385212 8385225 5.0E-06 AAAGCACGTGTTTA 3 V_MYCMAX_01_M00118 TRANSFAC - 8385212 8385225 5.0E-06 TAAACACGTGCTTT 3 V_MYCMAX_02_M00123 TRANSFAC + 8385213 8385224 4.0E-06 AAGCACGTGTTT 2 V_SIX1_01_M01313 TRANSFAC - 8384940 8384956 2.0E-06 AATAAGATATCAGCTGT 17 V_GFI1_01_M00250 TRANSFAC - 8384520 8384543 1.0E-06 AAAGAAGAAATCAGGGCCCACCAC 24 V_CMYC_01_M01145 TRANSFAC - 8385213 8385224 1.0E-05 AAACACGTGCTT 2 V_NKX61_01_M00424 TRANSFAC + 8379725 8379737 8.0E-06 CTTTTAATTTTTC 13 V_AML2_01_M01759 TRANSFAC - 8384967 8384974 1.0E-05 AACCACAA 8 V_SIX3_01_M01358 TRANSFAC - 8384940 8384956 5.0E-06 AATAAGATATCAGCTGT 17 V_AP1_Q6_01_M00925 TRANSFAC + 8379787 8379795 7.0E-06 ATGACTCAG 9 V_AP1_Q4_M00188 TRANSFAC + 8379786 8379796 5.0E-06 GATGACTCAGT 11 V_ARID3A_02_M02839 TRANSFAC + 8385034 8385048 4.0E-06 TCCCATATAAAAATT 15 V_OCT1_05_M00161 TRANSFAC + 8384862 8384875 1.0E-06 AGAATTTTCATGTC 14 V_MEF2_03_M00232 TRANSFAC - 8384843 8384864 7.0E-06 TCTGGCTCCAAAAATAGCATTT 22 V_MATH1_Q2_M01716 TRANSFAC + 8384494 8384503 9.0E-06 CCACCTGGTG 10 V_ASCL2_03_M02737 TRANSFAC - 8384745 8384761 8.0E-06 CGCTGCAGCTGCCACAT 17 V_USF_02_M00122 TRANSFAC + 8385212 8385225 3.0E-06 AAAGCACGTGTTTA 3 V_USF_02_M00122 TRANSFAC - 8385212 8385225 3.0E-06 TAAACACGTGCTTT 3 V_SFPI1_04_M02896 TRANSFAC - 8384971 8384984 3.0E-06 CCAAATCAGGAACC 14 V_MEF2_04_M00233 TRANSFAC - 8384843 8384864 1.0E-06 TCTGGCTCCAAAAATAGCATTT 22 V_AP1_C_M00199 TRANSFAC + 8379787 8379795 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC + 8384846 8384857 3.0E-06 TGCTATTTTTGG 12 V_GATA5_04_M02860 TRANSFAC - 8384941 8384957 1.0E-06 TAATAAGATATCAGCTG 17 V_SP1_01_M00008 TRANSFAC + 8379829 8379838 7.0E-06 GAGGCGGGGT 10 V_LMO2COM_01_M00277 TRANSFAC + 8380108 8380119 3.0E-06 CTGCAGGTGCAG 12 V_CTCF_02_M01259 TRANSFAC - 8384491 8384510 6.0E-06 GGTCATTCACCAGGTGGCAC 20 V_CTCF_01_M01200 TRANSFAC - 8384489 8384508 7.0E-06 TCATTCACCAGGTGGCACCA 20 V_SIX2_01_M01433 TRANSFAC - 8384940 8384956 6.0E-06 AATAAGATATCAGCTGT 17 V_MZF1_02_M00084 TRANSFAC + 8379796 8379808 1.0E-06 TGAGGAGGGGGAA 13 V_ICSBP_Q6_M00699 TRANSFAC - 8385154 8385165 5.0E-06 GACCAGAAACTG 12 V_AP1_Q4_01_M00926 TRANSFAC - 8379787 8379794 1.0E-05 TGAGTCAT 8 V_ZFP187_04_M02934 TRANSFAC + 8379746 8379761 4.0E-06 GAGCCCCTGTCCCTCA 16 V_MYOD_Q6_02_M02100 TRANSFAC - 8384938 8384946 8.0E-06 CAGCTGTCT 9 V_IPF1_05_M01255 TRANSFAC - 8379725 8379736 3.0E-06 AAAAATTAAAAG 12 V_AP1FJ_Q2_M00172 TRANSFAC + 8379786 8379796 7.0E-06 GATGACTCAGT 11 V_MAX_01_M00119 TRANSFAC + 8385212 8385225 0.0E+00 AAAGCACGTGTTTA 3 V_MAX_01_M00119 TRANSFAC - 8385212 8385225 0.0E+00 TAAACACGTGCTTT 3 V_HDX_01_M01333 TRANSFAC - 8384526 8384542 6.0E-06 AAGAAGAAATCAGGGCC 17 V_SMAD3_03_M02794 TRANSFAC - 8384867 8384883 1.0E-06 ATAAATCAGACATGAAA 17 V_FRA1_Q5_M01267 TRANSFAC - 8379787 8379794 1.0E-05 TGAGTCAT 8 V_NRF2_01_M00108 TRANSFAC + 8379739 8379748 6.0E-06 AACGGAAGAG 10 V_PLZF_02_M01075 TRANSFAC + 8384259 8384287 8.0E-06 CTGCAGGCAAGCTAAACCAGTTCCAGAAG 29 V_ETS1_B_M00339 TRANSFAC - 8384552 8384566 6.0E-06 ACAGGAAGCGTTTCA 15 V_SIX6_01_M01345 TRANSFAC - 8384940 8384956 5.0E-06 AATAAGATATCAGCTGT 17 V_RFX3_05_M02892 TRANSFAC - 8384653 8384675 2.0E-06 GGTGACACCTGGATACCAAATGC 23 V_NFE2_01_M00037 TRANSFAC - 8379787 8379797 5.0E-06 CACTGAGTCAT 11 V_PAX4_02_M00377 TRANSFAC - 8379727 8379737 3.0E-06 GAAAAATTAAA 11 V_MEF2_01_M00006 TRANSFAC - 8384844 8384859 8.0E-06 CTCCAAAAATAGCATT 16 V_PBX1_04_M01357 TRANSFAC - 8379668 8379684 1.0E-05 GCTCATATCAATAATTC 17 V_SOX9_Q4_M01284 TRANSFAC + 8385208 8385218 7.0E-06 AAACAAAGCAC 7 V_PAX6_01_M00097 TRANSFAC + 8384864 8384884 9.0E-06 AATTTTCATGTCTGATTTATG 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.