Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PITPNB Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23760 phosphatidylinositol transfer protein, beta chr22 - 28314755 - 28320255 28315255 Transcription Factor Binding Sites   Download all TFBS in the PITPNB promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX - 28316540 28316552 6.0E-06 TTCCAGAAACTTT 13 HSF2_HSF_DBD_trimeric_13_1 SELEX + 28316562 28316574 6.0E-06 TTCCAGAAACTTT 13 FOXO3_MA0157.1 JASPAR - 28314407 28314414 7.0E-06 TGTAAACA 8 FOXD1_MA0031.1 JASPAR - 28314406 28314413 7.0E-06 GTAAACAT 8 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 28316427 28316437 6.0E-06 TGTATAAACAT 11 MAX_bHLH_DBD_dimeric_10_1 SELEX - 28314499 28314508 2.0E-06 AACACGTGCT 10 EWSR1-FLI1_MA0149.1 JASPAR + 28316066 28316083 1.0E-05 GGAAAGAAAGCAGGGAGA 18 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 28316377 28316389 4.0E-06 TTTCAACAGGTTC 13 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 28316397 28316408 3.0E-06 AAGACGATTAAA 12 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 28316394 28316408 3.0E-06 TTTAATCGTCTTAAT 15 TCF7L1_HMG_full_monomeric_12_1 SELEX + 28314571 28314582 8.0E-06 AAAGAGAAAAGG 12 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 28316327 28316345 1.0E-06 CAACTGGATTACTAGGCCA 19 CLOCK_bHLH_DBD_dimeric_10_1 SELEX + 28314499 28314508 8.0E-06 AGCACGTGTT 10 CLOCK_bHLH_DBD_dimeric_10_1 SELEX - 28314499 28314508 4.0E-06 AACACGTGCT 10 Foxq1_MA0040.1 JASPAR - 28316429 28316439 7.0E-06 AGATGTTTATA 11 RELA_MA0107.1 JASPAR - 28314879 28314888 5.0E-06 GGGAGTTTCC 10 MNT_bHLH_DBD_dimeric_10_1 SELEX - 28314499 28314508 1.0E-06 AACACGTGCT 10 Gfi_MA0038.1 JASPAR + 28314753 28314762 2.0E-06 CAAATCACAG 10 Otx1_homeodomain_DBD_dimeric_15_1 SELEX + 28316394 28316408 5.0E-06 ATTAAGACGATTAAA 15 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 28316375 28316389 5.0E-06 TTTCAACAGGTTCTC 15 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 28316548 28316555 1.0E-05 ACATTCCA 8 Stat3_MA0144.1 JASPAR - 28315180 28315189 3.0E-06 TTCCGGGAAG 10 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 28315648 28315656 9.0E-06 CACATAAAA 9 FOXB1_forkhead_full_monomeric_9_1 SELEX - 28314406 28314414 3.0E-06 TGTAAACAT 9 ELF5_MA0136.1 JASPAR - 28316651 28316659 2.0E-06 TATTTCCTT 9 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 28316427 28316437 1.0E-05 TGTATAAACAT 11 NFE2L2_MA0150.1 JASPAR + 28315801 28315811 9.0E-06 GTGACTCGGCA 11 RREB1_MA0073.1 JASPAR - 28314842 28314861 8.0E-06 CCCCAACCCCCCACCCCCAG 20 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 28316416 28316429 7.0E-06 GAAAACATTTTTGT 14 V_NFKAPPAB65_01_M00052 TRANSFAC - 28314879 28314888 7.0E-06 GGGAGTTTCC 10 RXR_RAR_DR5_MA0159.1 JASPAR + 28316264 28316280 7.0E-06 GGATCAGCTAGAGGGCA 17 V_AP1_Q2_M00173 TRANSFAC + 28316505 28316515 1.0E-06 ACTGACTCAGT 11 V_STAT5A_Q6_M01890 TRANSFAC + 28314508 28314520 2.0E-06 TAACTTCTAAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 28314512 28314524 4.0E-06 TACTTTCTTAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC + 28316358 28316370 4.0E-06 TGTCTTCTAAGAA 13 V_FREAC7_01_M00293 TRANSFAC + 28316425 28316440 4.0E-06 TTTGTATAAACATCTG 16 V_FOXP3_Q4_M00992 TRANSFAC + 28314360 28314376 4.0E-06 AACCAGCTGTGACAGAC 17 V_AR_02_M00953 TRANSFAC - 28312204 28312230 9.0E-06 AGTTACTTGACTCATTGTTCTGAATGT 27 V_FOXO3_02_M02270 TRANSFAC - 28314407 28314414 7.0E-06 TGTAAACA 8 V_DUXL_01_M01390 TRANSFAC - 28316699 28316715 9.0E-06 ATGTCCAATCAACAAAG 17 TAL1_TCF3_MA0091.1 JASPAR + 28316431 28316442 2.0E-06 TAAACATCTGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 28316433 28316444 8.0E-06 ACACCAGATGTT 12 V_HMGIY_Q3_M01010 TRANSFAC - 28314289 28314303 8.0E-06 TTTTCAAATTCTTCA 15 V_HMGIY_Q3_M01010 TRANSFAC - 28314445 28314459 6.0E-06 AAGTGATTTTGTTGA 15 V_BCL6_01_M01183 TRANSFAC - 28316417 28316432 7.0E-06 TATACAAAAATGTTTT 16 V_BCL6_01_M01183 TRANSFAC - 28316486 28316501 4.0E-06 TTTCCGTTATTTTTTT 16 V_IRF_Q6_01_M00972 TRANSFAC + 28314570 28314580 3.0E-06 AAAAGAGAAAA 11 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 28316258 28316270 6.0E-06 CTGATCCTTGAAC 13 V_AP4_Q6_M00176 TRANSFAC - 28314361 28314370 2.0E-06 CACAGCTGGT 10 V_ARNT_01_M00236 TRANSFAC - 28314496 28314511 0.0E+00 GTTAACACGTGCTCTG 16 V_STAT5B_01_M00459 TRANSFAC - 28314509 28314523 7.0E-06 ACTTTCTTAGAAGTT 15 V_SP1_02_M01303 TRANSFAC + 28314845 28314855 5.0E-06 GGGGTGGGGGG 11 V_MEF2A_Q6_M02024 TRANSFAC - 28316402 28316411 6.0E-06 TATTTTAATC 10 V_AR_03_M00956 TRANSFAC - 28312204 28312230 6.0E-06 AGTTACTTGACTCATTGTTCTGAATGT 27 V_STAT4_Q4_M01666 TRANSFAC - 28316357 28316370 3.0E-06 TTCTTAGAAGACAA 14 V_AP1_Q6_M00174 TRANSFAC + 28316505 28316515 4.0E-06 ACTGACTCAGT 11 V_HMBOX1_01_M01456 TRANSFAC + 28316621 28316637 6.0E-06 TAGTGCTAGTTATTGTG 17 V_SOX7_03_M02807 TRANSFAC + 28312205 28312226 4.0E-06 CATTCAGAACAATGAGTCAAGT 22 V_HELIOSA_02_M01004 TRANSFAC + 28316649 28316659 1.0E-05 TTAAGGAAATA 11 V_MYCMAX_01_M00118 TRANSFAC + 28314497 28314510 7.0E-06 AGAGCACGTGTTAA 14 V_MYCMAX_01_M00118 TRANSFAC - 28314497 28314510 7.0E-06 TTAACACGTGCTCT 14 V_FOXO1_02_M00474 TRANSFAC + 28314403 28314416 3.0E-06 GTAATGTTTACAGT 14 V_MYCMAX_02_M00123 TRANSFAC + 28314498 28314509 7.0E-06 GAGCACGTGTTA 12 V_GFI1_01_M00250 TRANSFAC + 28314747 28314770 4.0E-06 GGACGACAAATCACAGTCAGAACC 24 V_CMYC_01_M01145 TRANSFAC - 28314498 28314509 4.0E-06 TAACACGTGCTC 12 V_TEF_Q6_M00672 TRANSFAC - 28316426 28316437 0.0E+00 ATGTTTATACAA 12 V_NFAT_Q6_M00302 TRANSFAC - 28315537 28315548 8.0E-06 AACTGGAAAACT 12 V_HOXA3_07_M02869 TRANSFAC + 28316387 28316400 7.0E-06 AAAGGCTATTAAGA 14 V_AP1_Q4_M00188 TRANSFAC + 28316505 28316515 3.0E-06 ACTGACTCAGT 11 V_SP1_Q6_M00196 TRANSFAC - 28315256 28315268 8.0E-06 GGGAGGCGGGGCC 13 V_IK1_01_M00086 TRANSFAC + 28315073 28315085 4.0E-06 ATTTAGGAATATC 13 V_AP2BETA_Q3_M01858 TRANSFAC - 28315703 28315718 2.0E-06 GCCAAGGGCTGGGGAG 16 V_EGR1_04_M02848 TRANSFAC - 28315146 28315161 5.0E-06 TTGTGAGTGGGTCTGT 16 V_USF_02_M00122 TRANSFAC + 28314497 28314510 8.0E-06 AGAGCACGTGTTAA 14 V_USF_02_M00122 TRANSFAC - 28314497 28314510 8.0E-06 TTAACACGTGCTCT 14 V_SFPI1_04_M02896 TRANSFAC + 28316489 28316502 6.0E-06 AAAATAACGGAAAT 14 V_SFPI1_04_M02896 TRANSFAC + 28316645 28316658 6.0E-06 AGATTTAAGGAAAT 14 V_ELF5_01_M01197 TRANSFAC + 28316649 28316659 1.0E-06 TTAAGGAAATA 11 V_DUXBL_01_M02968 TRANSFAC - 28316699 28316715 9.0E-06 ATGTCCAATCAACAAAG 17 V_OCT1_04_M00138 TRANSFAC + 28316395 28316417 8.0E-06 TTAAGACGATTAAAATATCACGA 23 V_AP4_Q5_M00175 TRANSFAC - 28314361 28314370 6.0E-06 CACAGCTGGT 10 V_TAL1BETAE47_01_M00065 TRANSFAC - 28316430 28316445 5.0E-06 TACACCAGATGTTTAT 16 V_RREB1_01_M00257 TRANSFAC - 28314848 28314861 1.0E-06 CCCCAACCCCCCAC 14 V_XFD2_01_M00268 TRANSFAC + 28316427 28316440 2.0E-06 TGTATAAACATCTG 14 V_VMYB_01_M00003 TRANSFAC + 28316491 28316500 0.0E+00 AATAACGGAA 10 V_STAT4_Q5_M02117 TRANSFAC + 28314512 28314521 1.0E-06 TTCTAAGAAA 10 V_STAT3_03_M01595 TRANSFAC - 28315176 28315191 7.0E-06 GGTTCCGGGAAGATGG 16 V_BLIMP1_Q6_M01066 TRANSFAC + 28316304 28316319 9.0E-06 GAGGGTGGGAAATGAG 16 V_IRF7_01_M00453 TRANSFAC + 28314290 28314307 9.0E-06 GAAGAATTTGAAAACCAA 18 V_ZFP691_04_M02937 TRANSFAC + 28315652 28315668 4.0E-06 TAAAAGACTCCTGACAG 17 V_TAL1BETAITF2_01_M00070 TRANSFAC - 28316430 28316445 6.0E-06 TACACCAGATGTTTAT 16 V_GATA4_Q3_M00632 TRANSFAC + 28316070 28316081 2.0E-06 AGAAAGCAGGGA 12 V_GATA4_Q3_M00632 TRANSFAC + 28316645 28316656 1.0E-05 AGATTTAAGGAA 12 V_PTF1BETA_Q6_M00657 TRANSFAC - 28315531 28315544 6.0E-06 GGAAAACTCACCGG 14 V_FREAC2_01_M00290 TRANSFAC - 28314403 28314418 4.0E-06 GGACTGTAAACATTAC 16 V_HFH8_01_M00294 TRANSFAC - 28316427 28316439 1.0E-06 AGATGTTTATACA 13 V_EOMES_04_M02851 TRANSFAC - 28315623 28315638 8.0E-06 GGTGAGGTGTCGGTCA 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 28314782 28314790 8.0E-06 GAGGGTGGG 9 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 28316304 28316312 8.0E-06 GAGGGTGGG 9 V_AP1FJ_Q2_M00172 TRANSFAC + 28316505 28316515 4.0E-06 ACTGACTCAGT 11 V_MAX_01_M00119 TRANSFAC + 28314497 28314510 7.0E-06 AGAGCACGTGTTAA 14 V_MAX_01_M00119 TRANSFAC - 28314497 28314510 7.0E-06 TTAACACGTGCTCT 14 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 28316430 28316445 4.0E-06 TACACCAGATGTTTAT 16 V_EBNA1_01_M01745 TRANSFAC + 28315516 28315531 6.0E-06 GGCAGCCTACGCTTTC 16 V_ZFP206_01_M01742 TRANSFAC - 28315246 28315256 4.0E-06 CGCGCAGGCGC 11 V_STAT_01_M00223 TRANSFAC + 28315181 28315189 7.0E-06 TTCCCGGAA 9 V_ZFP281_01_M01597 TRANSFAC + 28314843 28314853 1.0E-06 TGGGGGTGGGG 11 V_RXR_RAR_01_M02272 TRANSFAC + 28316264 28316280 7.0E-06 GGATCAGCTAGAGGGCA 17 V_IRF1_Q6_01_M01881 TRANSFAC - 28314569 28314582 4.0E-06 CCTTTTCTCTTTTT 14 V_ZFP281_04_M02831 TRANSFAC - 28314848 28314862 4.0E-06 TCCCCAACCCCCCAC 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 28316066 28316083 1.0E-05 GGAAAGAAAGCAGGGAGA 18 V_PR_02_M00957 TRANSFAC - 28312204 28312230 7.0E-06 AGTTACTTGACTCATTGTTCTGAATGT 27 V_NFE2L2_01_M02263 TRANSFAC + 28315801 28315811 9.0E-06 GTGACTCGGCA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 28315699 28315712 6.0E-06 GGCTGGGGAGGGGA 14 V_ELF5_04_M02241 TRANSFAC - 28316651 28316659 2.0E-06 TATTTCCTT 9 V_GFI1_Q6_01_M02010 TRANSFAC - 28314753 28314762 2.0E-06 CTGTGATTTG 10 V_STAT1_Q6_M01823 TRANSFAC - 28315180 28315189 8.0E-06 TTCCGGGAAG 10 V_STAT1_05_M01260 TRANSFAC + 28314270 28314291 6.0E-06 TATTTCTAAGAATTTAAAATGA 22 V_STAT1_05_M01260 TRANSFAC + 28314509 28314530 6.0E-06 AACTTCTAAGAAAGTAGGTGGG 22 V_MIF1_01_M00279 TRANSFAC - 28314434 28314451 9.0E-06 TTGTTGAAAAGTCACGGC 18 V_PAX4_04_M00380 TRANSFAC - 28316731 28316760 7.0E-06 ATAAAATATCTCCATTACTTAGCACAGTAC 30 V_CEBPA_Q6_M01866 TRANSFAC - 28312239 28312251 9.0E-06 TTGTTAAGCAAAT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.