Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CENPL Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 91687 centromere protein L chr1 - 173792770 - 173798777 173793270 Transcription Factor Binding Sites   Download all TFBS in the CENPL promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX - 173794242 173794254 1.0E-06 TTCTCGAATATTT 13 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 173793401 173793416 3.0E-06 GAAGGGCAAAAGGACA 16 HSF1_HSF_full_trimeric_13_1 SELEX - 173794242 173794254 5.0E-06 TTCTCGAATATTT 13 SOX8_HMG_full_dimeric_17_1 SELEX + 173793065 173793081 4.0E-06 AATAAAATGCCGTGATG 17 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 173793402 173793419 1.0E-06 AAGGGCAAAAGGACAGTG 18 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX - 173793524 173793535 1.0E-06 GAAACGATTTTA 12 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 173793639 173793647 5.0E-06 GCCACTTAA 9 CLOCK_bHLH_DBD_dimeric_10_1 SELEX - 173794206 173794215 7.0E-06 TACACGTGTC 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 173793062 173793071 1.0E-05 ACCAATAAAA 10 Ar_MA0007.1 JASPAR + 173793408 173793429 4.0E-06 AAAAGGACAGTGCGTCCCAACC 22 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 173793639 173793647 8.0E-06 GCCACTTAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 173793063 173793072 1.0E-06 CCAATAAAAT 10 HSF4_HSF_DBD_trimeric_13_1 SELEX - 173794242 173794254 1.0E-05 TTCTCGAATATTT 13 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 173793062 173793072 8.0E-06 ACCAATAAAAT 11 NFIX_NFI_full_monomeric_9_2 SELEX + 173792928 173792936 8.0E-06 AATGCCAAT 9 MZF1_5-13_MA0057.1 JASPAR + 173793394 173793403 4.0E-06 GGAGGGGGAA 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 173793063 173793072 1.0E-06 CCAATAAAAT 10 POU1F1_POU_DBD_monomeric_17_1 SELEX - 173794238 173794254 7.0E-06 TTCTCGAATATTTAAGG 17 ELK1_MA0028.1 JASPAR - 173793953 173793962 1.0E-06 GAACCGGAAA 10 Nkx3-2_MA0122.1 JASPAR - 173793639 173793647 8.0E-06 TTAAGTGGC 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 173793063 173793071 6.0E-06 CCAATAAAA 9 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 173793940 173793955 9.0E-06 AAAACAAGGAGTAACA 16 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 173793063 173793072 1.0E-06 CCAATAAAAT 10 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 173793402 173793416 1.0E-06 AAGGGCAAAAGGACA 15 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 173793062 173793072 6.0E-06 ACCAATAAAAT 11 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 173793402 173793417 5.0E-06 AAGGGCAAAAGGACAG 16 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 173793163 173793175 5.0E-06 GAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 173793164 173793176 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 173793165 173793177 6.0E-06 AAAAAAAAAAAAA 13 E2F2_E2F_DBD_dimeric_18_1 SELEX + 173793171 173793188 4.0E-06 AAAAAAACCGCCAAAATG 18 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 173793402 173793416 1.0E-06 AAGGGCAAAAGGACA 15 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 173793063 173793072 1.0E-06 CCAATAAAAT 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 173793163 173793176 8.0E-06 GAAAAAAAAAAAAA 14 V_MINI20_B_M00324 TRANSFAC + 173793546 173793566 2.0E-06 CTGCGGCCCCACGCAGGAAGC 21 V_TGIF_01_M00418 TRANSFAC - 173793184 173793194 2.0E-06 AGCTGTCATTT 11 V_MEIS1_02_M01419 TRANSFAC - 173793183 173793198 5.0E-06 TCTTAGCTGTCATTTT 16 V_GATA1_Q6_M02004 TRANSFAC - 173794148 173794162 9.0E-06 GGTGGAGATAAGGGA 15 V_BCL6B_03_M02740 TRANSFAC - 173793109 173793124 5.0E-06 ACTTTTGAAGAATGAT 16 V_PAX4_03_M00378 TRANSFAC + 173794153 173794164 7.0E-06 TATCTCCACCCC 12 V_ZEC_01_M01081 TRANSFAC - 173793601 173793613 3.0E-06 CAATTTTAGTTGC 13 V_EVI1_04_M00081 TRANSFAC + 173793162 173793176 3.0E-06 AGAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC + 173793163 173793177 8.0E-06 GAAAAAAAAAAAAAA 15 V_AML3_Q6_M01856 TRANSFAC - 173792812 173792819 1.0E-05 AACCACAA 8 V_IK_Q5_M01169 TRANSFAC - 173793221 173793230 1.0E-06 TTTGGGAGGG 10 V_ISL2_01_M01328 TRANSFAC - 173794274 173794289 3.0E-06 AGAAATCCCTTAAAAT 16 V_GLI1_Q2_M01042 TRANSFAC + 173794427 173794436 1.0E-06 GACCACCCAA 10 V_AP4_Q6_M00176 TRANSFAC - 173793438 173793447 5.0E-06 CTCAGCTGGA 10 V_GLI1_01_M01702 TRANSFAC + 173794427 173794437 7.0E-06 GACCACCCAAC 11 V_STAT6_01_M00494 TRANSFAC + 173794293 173794300 7.0E-06 TATTTCCA 8 V_NKX24_01_M01350 TRANSFAC + 173793636 173793651 1.0E-05 CGAGCCACTTAACCAC 16 V_AIRE_02_M01000 TRANSFAC + 173794914 173794938 1.0E-06 TGTTCTTAACTGGATAGCCTTATGT 25 V_PU1_Q4_M01172 TRANSFAC + 173793874 173793892 9.0E-06 TTGCTCGCCTTCCTCTTTC 19 V_PU1_Q4_M01172 TRANSFAC + 173794365 173794383 2.0E-06 AACATGTACTTCCCTTCTT 19 V_HOXD13_01_M01404 TRANSFAC + 173793060 173793075 1.0E-06 TTACCAATAAAATGCC 16 V_LYF1_01_M00141 TRANSFAC - 173793222 173793230 9.0E-06 TTTGGGAGG 9 V_GM497_04_M02864 TRANSFAC + 173792820 173792835 2.0E-06 CACAGCACACAAGTAA 16 V_TCFAP2E_04_M02926 TRANSFAC + 173793159 173793172 2.0E-06 TGAAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793160 173793173 4.0E-06 GAAGAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793161 173793174 2.0E-06 AAGAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793162 173793175 4.0E-06 AGAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793163 173793176 3.0E-06 GAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793164 173793177 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 173793165 173793178 7.0E-06 AAAAAAAAAAAAAC 14 V_KLF7_04_M02877 TRANSFAC - 173793998 173794014 2.0E-06 AGGTATACGCCCTTCTC 17 V_HMGA2_01_M01300 TRANSFAC - 173793173 173793187 2.0E-06 ATTTTGGCGGTTTTT 15 V_ELF4_04_M02850 TRANSFAC + 173793160 173793176 9.0E-06 GAAGAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 173793161 173793177 6.0E-06 AAGAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 173793162 173793178 2.0E-06 AGAAAAAAAAAAAAAAC 17 V_ELF4_04_M02850 TRANSFAC + 173793163 173793179 4.0E-06 GAAAAAAAAAAAAAACC 17 V_GLI3_02_M01704 TRANSFAC + 173794427 173794437 3.0E-06 GACCACCCAAC 11 V_GC_01_M00255 TRANSFAC - 173794686 173794699 9.0E-06 GGGAGGCGGAGCTT 14 V_MEIS2_01_M01488 TRANSFAC - 173793183 173793198 4.0E-06 TCTTAGCTGTCATTTT 16 V_TGIF_02_M01346 TRANSFAC + 173793182 173793198 0.0E+00 CAAAATGACAGCTAAGA 17 V_ZIC3_01_M00450 TRANSFAC - 173794427 173794435 6.0E-06 TGGGTGGTC 9 V_ZFP105_03_M02827 TRANSFAC + 173793161 173793175 2.0E-06 AAGAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 173793162 173793176 1.0E-06 AGAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 173793163 173793177 1.0E-06 GAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 173793164 173793178 2.0E-06 AAAAAAAAAAAAAAC 15 V_ZFP105_03_M02827 TRANSFAC + 173793165 173793179 9.0E-06 AAAAAAAAAAAAACC 15 V_ZFP105_03_M02827 TRANSFAC + 173793166 173793180 6.0E-06 AAAAAAAAAAAACCG 15 V_HOXB13_01_M01467 TRANSFAC + 173793060 173793075 1.0E-06 TTACCAATAAAATGCC 16 V_HIC1_06_M02867 TRANSFAC - 173793785 173793800 9.0E-06 GCTAGTGCCCAAGATT 16 V_NKX31_02_M02782 TRANSFAC + 173793635 173793651 1.0E-06 CCGAGCCACTTAACCAC 17 V_NKX26_01_M01322 TRANSFAC + 173793636 173793651 3.0E-06 CGAGCCACTTAACCAC 16 V_AML2_01_M01759 TRANSFAC - 173792812 173792819 1.0E-05 AACCACAA 8 V_LEF1_03_M02878 TRANSFAC - 173794333 173794348 9.0E-06 GAAAAACAATCACGAA 16 V_NFE4_Q5_M02105 TRANSFAC + 173793431 173793442 6.0E-06 GTCCCTCTCCAG 12 V_YY1_Q6_02_M01035 TRANSFAC + 173793610 173793620 5.0E-06 ATTGCCATTTT 11 V_ZIC1_01_M00448 TRANSFAC - 173794427 173794435 6.0E-06 TGGGTGGTC 9 V_TGIF1_01_M03111 TRANSFAC + 173793182 173793198 0.0E+00 CAAAATGACAGCTAAGA 17 V_NKX32_02_M01482 TRANSFAC + 173793635 173793651 3.0E-06 CCGAGCCACTTAACCAC 17 V_MAF_Q6_01_M00983 TRANSFAC + 173793372 173793382 6.0E-06 TGCGGAGTCAG 11 V_GLI3_01_M01596 TRANSFAC - 173794426 173794436 7.0E-06 TTGGGTGGTCC 11 V_MINI19_B_M00323 TRANSFAC + 173793546 173793566 4.0E-06 CTGCGGCCCCACGCAGGAAGC 21 V_MTF1_06_M02882 TRANSFAC + 173793162 173793175 3.0E-06 AGAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 173793164 173793177 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 173793165 173793178 1.0E-06 AAAAAAAAAAAAAC 14 V_MTF1_06_M02882 TRANSFAC + 173793166 173793179 6.0E-06 AAAAAAAAAAAACC 14 V_GLI2_01_M01703 TRANSFAC + 173794427 173794437 1.0E-06 GACCACCCAAC 11 V_NKX25_03_M01414 TRANSFAC + 173793636 173793651 9.0E-06 CGAGCCACTTAACCAC 16 V_MYF6_04_M02885 TRANSFAC + 173793262 173793276 1.0E-05 AGACACAAACGCACC 15 V_FAC1_01_M00456 TRANSFAC + 173793163 173793176 9.0E-06 GAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 173793164 173793177 3.0E-06 AAAAAAAAAAAAAA 14 V_TAL1_01_M01591 TRANSFAC + 173794147 173794159 3.0E-06 TTCCCTTATCTCC 13 V_ZSCAN4_04_M02942 TRANSFAC + 173792820 173792835 1.0E-06 CACAGCACACAAGTAA 16 V_T3R_Q6_M00963 TRANSFAC - 173793410 173793418 3.0E-06 ACTGTCCTT 9 V_PARP_Q3_M01211 TRANSFAC - 173794292 173794301 8.0E-06 TTGGAAATAC 10 V_TCF1_06_M02815 TRANSFAC - 173794379 173794395 7.0E-06 GCTGACTTAACCAAGAA 17 V_TCF7L2_04_M02922 TRANSFAC - 173794333 173794348 8.0E-06 GAAAAACAATCACGAA 16 V_HSF_Q6_M00641 TRANSFAC - 173794262 173794274 8.0E-06 TTCCAGGAGTTCC 13 V_ZFP281_04_M02831 TRANSFAC - 173793394 173793408 9.0E-06 TGCCCTTCCCCCTCC 15 V_SRF_06_M02916 TRANSFAC + 173793157 173793173 5.0E-06 CCTGAAGAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 173793158 173793174 1.0E-06 CTGAAGAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 173793159 173793175 1.0E-06 TGAAGAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 173793160 173793176 0.0E+00 GAAGAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 173793161 173793177 0.0E+00 AAGAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 173793162 173793178 0.0E+00 AGAAAAAAAAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 173793163 173793179 0.0E+00 GAAAAAAAAAAAAAACC 17 V_SRF_06_M02916 TRANSFAC + 173793164 173793180 2.0E-06 AAAAAAAAAAAAAACCG 17 V_SRF_06_M02916 TRANSFAC + 173793165 173793181 2.0E-06 AAAAAAAAAAAAACCGC 17 V_SRF_06_M02916 TRANSFAC + 173793166 173793182 7.0E-06 AAAAAAAAAAAACCGCC 17 V_HSF2_02_M01244 TRANSFAC + 173794242 173794254 5.0E-06 AAATATTCGAGAA 13 V_VMAF_01_M00035 TRANSFAC - 173793369 173793387 7.0E-06 AGAAGCTGACTCCGCAGGA 19 V_HOMEZ_01_M01429 TRANSFAC + 173793523 173793539 3.0E-06 TTAAAATCGTTTCCCGA 17 V_GLI_Q2_M01037 TRANSFAC - 173794426 173794437 4.0E-06 GTTGGGTGGTCC 12 V_FOXO4_01_M00472 TRANSFAC - 173794337 173794347 5.0E-06 AAAAACAATCA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 173793394 173793407 2.0E-06 GGAGGGGGAAGGGC 14 V_GATA1_02_M00126 TRANSFAC - 173794148 173794161 2.0E-06 GTGGAGATAAGGGA 14 V_TCF3_05_M02920 TRANSFAC + 173793159 173793173 8.0E-06 TGAAGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 173793160 173793174 8.0E-06 GAAGAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 173793161 173793175 3.0E-06 AAGAAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 173793162 173793176 6.0E-06 AGAAAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 173794338 173794352 8.0E-06 TGGCGAAAAACAATC 15 V_ZIC2_01_M00449 TRANSFAC - 173794427 173794435 6.0E-06 TGGGTGGTC 9 V_GLIS2_04_M02863 TRANSFAC - 173793057 173793070 3.0E-06 TTTATTGGTAAAGA 14 V_BHLHB2_04_M02845 TRANSFAC + 173794200 173794222 2.0E-06 TTTCTAGACACGTGTACTCCAAT 23 V_PAX4_04_M00380 TRANSFAC + 173793164 173793193 0.0E+00 AAAAAAAAAAAAAACCGCCAAAATGACAGC 30 V_SPI1_02_M02043 TRANSFAC - 173794371 173794380 6.0E-06 AAGGGAAGTA 10 V_NKX21_01_M01312 TRANSFAC + 173793636 173793651 5.0E-06 CGAGCCACTTAACCAC 16 V_TCF11_01_M00285 TRANSFAC - 173793178 173793190 8.0E-06 GTCATTTTGGCGG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.