Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SUPV3L1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6832 suppressor of var1, 3-like 1 (S. cerevisiae) chr10 + 70934992 - 70940492 70939992 Transcription Factor Binding Sites   Download all TFBS in the SUPV3L1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints LBX2_homeodomain_DBD_dimeric_13_1 SELEX + 70940493 70940505 9.0E-06 CTGTATCTGATTA 13 GMEB2_SAND_DBD_dimeric_8_2 SELEX + 70939456 70939463 7.0E-06 TTACGTAA 8 GMEB2_SAND_DBD_dimeric_8_2 SELEX - 70939456 70939463 7.0E-06 TTACGTAA 8 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 70939207 70939224 8.0E-06 GTGGATCATCTGAGGTCA 18 TEF_bZIP_DBD_dimeric_12_1 SELEX + 70939454 70939465 4.0E-06 ACTTACGTAATA 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 70939454 70939465 5.0E-06 TATTACGTAAGT 12 TBX20_TBX_DBD_dimeric_19_1 SELEX + 70939283 70939301 5.0E-06 ACTTGTGAATTTAACATGT 19 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 6.0E-06 GTCACGTGAT 10 HLF_bZIP_full_dimeric_12_1 SELEX + 70939454 70939465 3.0E-06 ACTTACGTAATA 12 HLF_bZIP_full_dimeric_12_1 SELEX - 70939454 70939465 8.0E-06 TATTACGTAAGT 12 NFIL3_MA0025.1 JASPAR + 70939456 70939466 4.0E-06 TTACGTAATAC 11 NFYA_MA0060.1 JASPAR + 70935281 70935296 7.0E-06 ATGCACCAATCAGCTC 16 DBP_bZIP_full_dimeric_12_1 SELEX + 70939454 70939465 3.0E-06 ACTTACGTAATA 12 DBP_bZIP_full_dimeric_12_1 SELEX - 70939454 70939465 4.0E-06 TATTACGTAAGT 12 TBX1_TBX_DBD_dimeric_19_1 SELEX + 70939283 70939301 8.0E-06 ACTTGTGAATTTAACATGT 19 CLOCK_bHLH_DBD_dimeric_10_1 SELEX - 70940826 70940835 7.0E-06 TACACGTGTC 10 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 70940696 70940711 9.0E-06 TAAAGAATCCTAAAAG 16 USF1_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 USF1_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 2.0E-06 GTCACGTGAT 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 70939717 70939726 2.0E-06 ATCACGTGAC 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 70939717 70939726 3.0E-06 GTCACGTGAT 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 2.0E-06 GTCACGTGAT 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 SRY_MA0084.1 JASPAR + 70939560 70939568 7.0E-06 GTTAACAAT 9 RFX3_RFX_DBD_dimeric_15_1 SELEX - 70939489 70939503 3.0E-06 TGTTGCTAAGAAATA 15 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 2.0E-06 GTCACGTGAT 10 TFEB_bHLH_full_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 70939717 70939726 5.0E-06 GTCACGTGAT 10 Lhx3_MA0135.1 JASPAR + 70940500 70940512 8.0E-06 TGATTAATTCTTA 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 70939774 70939784 8.0E-06 GAAAATAATCA 11 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 70939198 70939213 8.0E-06 GAGGTCAGGAGTTCGA 16 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 70939454 70939465 3.0E-06 ACTTACGTAATA 12 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 70939454 70939465 6.0E-06 TATTACGTAAGT 12 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 70940502 70940514 4.0E-06 GTTAAGAATTAAT 13 MLXIPL_bHLH_full_dimeric_10_1 SELEX + 70939717 70939726 5.0E-06 ATCACGTGAC 10 MLXIPL_bHLH_full_dimeric_10_1 SELEX - 70939717 70939726 1.0E-06 GTCACGTGAT 10 FEV_MA0156.1 JASPAR + 70939548 70939555 1.0E-05 CAGGAAAT 8 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 1.0E-06 ATCACGTGAC 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 9.0E-06 GTCACGTGAT 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 2.0E-06 ATCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 4.0E-06 GTCACGTGAT 10 MYBL1_MYB_DBD_monomeric_11_1 SELEX - 70939913 70939923 9.0E-06 CTGACCGTTAA 11 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 70939529 70939546 6.0E-06 TATGATAACGTTAGCGAT 18 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 70939199 70939213 2.0E-06 GAGGTCAGGAGTTCG 15 MLX_bHLH_full_dimeric_10_1 SELEX + 70939717 70939726 2.0E-06 ATCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX - 70939717 70939726 1.0E-06 GTCACGTGAT 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 70939717 70939726 3.0E-06 ATCACGTGAC 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 70939717 70939726 2.0E-06 GTCACGTGAT 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 70939717 70939726 3.0E-06 ATCACGTGAC 10 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 70939292 70939303 1.0E-05 CAACATGTTAAA 12 V_USF_Q6_M00187 TRANSFAC - 70939717 70939726 7.0E-06 GTCACGTGAT 10 V_APOLYA_B_M00310 TRANSFAC - 70939584 70939598 7.0E-06 ACTAAATAGCATTTC 15 V_EBF_Q6_M00977 TRANSFAC - 70939788 70939798 9.0E-06 TTCCCTAAAGA 11 V_TBX15_01_M01263 TRANSFAC + 70939283 70939301 5.0E-06 ACTTGTGAATTTAACATGT 19 V_EVI1_05_M00082 TRANSFAC - 70939539 70939549 2.0E-06 TGATATGATAA 11 V_SPDEF_04_M02915 TRANSFAC - 70939410 70939425 6.0E-06 TACATCATCCTAGCAG 16 V_SOX5_01_M00042 TRANSFAC + 70939561 70939570 7.0E-06 TTAACAATGC 10 V_MAFB_03_M02879 TRANSFAC - 70939373 70939387 6.0E-06 ACATGGCAAAAATAC 15 V_OTX_Q1_M01117 TRANSFAC + 70940501 70940508 5.0E-06 GATTAATT 8 V_GBX2_01_M01382 TRANSFAC - 70939585 70939601 9.0E-06 AACACTAAATAGCATTT 17 V_GBX2_01_M01382 TRANSFAC + 70939586 70939602 7.0E-06 AATGCTATTTAGTGTTT 17 V_CEBP_01_M00159 TRANSFAC - 70940216 70940228 4.0E-06 TGTTTGGTATTTT 13 V_GATA1_03_M00127 TRANSFAC - 70939861 70939874 3.0E-06 AAGAAGATTAGCAG 14 V_RFX4_03_M02789 TRANSFAC + 70939491 70939505 8.0E-06 TTTCTTAGCAACATT 15 V_MYB_05_M02779 TRANSFAC - 70939551 70939567 1.0E-06 TTGTTAACCGTCATTTC 17 V_LHX3_01_M01471 TRANSFAC - 70940494 70940510 8.0E-06 AGAATTAATCAGATACA 17 V_PU1_Q4_M01172 TRANSFAC - 70939544 70939562 9.0E-06 AACCGTCATTTCCTGATAT 19 V_LYF1_01_M00141 TRANSFAC + 70939579 70939587 9.0E-06 TTTGGGAAA 9 V_CDP_04_M01344 TRANSFAC + 70939521 70939535 7.0E-06 AAGTTATTATCGCTA 15 V_CDP_04_M01344 TRANSFAC - 70939521 70939535 2.0E-06 TAGCGATAATAACTT 15 V_AR_03_M00956 TRANSFAC - 70939310 70939336 0.0E+00 ATTTGTTGAATACCGTGTTCTCATGTG 27 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 70939200 70939214 2.0E-06 TGAGGTCAGGAGTTC 15 V_RPC155_01_M01798 TRANSFAC - 70939194 70939209 0.0E+00 TCAGGAGTTCGAGACC 16 V_SOX13_03_M02797 TRANSFAC + 70939479 70939494 9.0E-06 AGTGCAACAATATTTC 16 V_HELIOSA_02_M01004 TRANSFAC - 70939906 70939916 1.0E-06 TTAAGGAAAAC 11 V_PR_Q2_M00960 TRANSFAC + 70939882 70939891 3.0E-06 GAAAGAACAC 10 V_PR_01_M00954 TRANSFAC - 70939310 70939336 7.0E-06 ATTTGTTGAATACCGTGTTCTCATGTG 27 V_ZFP410_03_M02832 TRANSFAC - 70939754 70939770 9.0E-06 ATCTTTGGGATGTCATA 17 V_SREBP1_01_M00220 TRANSFAC + 70939716 70939726 1.0E-06 CATCACGTGAC 11 V_SREBP1_01_M00220 TRANSFAC - 70939717 70939727 6.0E-06 TGTCACGTGAT 11 V_E4BP4_01_M00045 TRANSFAC + 70939454 70939465 4.0E-06 ACTTACGTAATA 12 V_E4BP4_01_M00045 TRANSFAC - 70939454 70939465 5.0E-06 TATTACGTAAGT 12 V_CART1_01_M00416 TRANSFAC - 70939830 70939847 7.0E-06 AGATAATTCTCGTTCTCT 18 V_MYCMAX_02_M00123 TRANSFAC + 70939716 70939727 7.0E-06 CATCACGTGACA 12 V_HNF1_Q6_M00790 TRANSFAC + 70940500 70940517 3.0E-06 TGATTAATTCTTAACGCC 18 V_E2F1_01_M01250 TRANSFAC - 70940799 70940806 1.0E-05 CGTTTCTT 8 V_ZBTB7B_04_M02930 TRANSFAC - 70939795 70939811 5.0E-06 ATTGGGACCACCTTTCC 17 V_IRF5_04_M02873 TRANSFAC + 70939831 70939845 6.0E-06 GAGAACGAGAATTAT 15 V_MRF2_01_M00454 TRANSFAC + 70940212 70940225 3.0E-06 CTCCAAAATACCAA 14 V_ZBP89_Q4_M01816 TRANSFAC - 70940818 70940827 2.0E-06 TCCTCCCCCA 10 V_IRX4_01_M01410 TRANSFAC - 70939290 70939306 4.0E-06 CTGCAACATGTTAAATT 17 V_IRF3_Q3_M01279 TRANSFAC - 70939443 70939455 3.0E-06 GTACTTTTGCTTT 13 V_IRF3_Q3_M01279 TRANSFAC + 70939777 70939789 1.0E-06 TTATTTTCCCTTC 13 V_MYBL1_03_M02780 TRANSFAC - 70939551 70939567 1.0E-06 TTGTTAACCGTCATTTC 17 V_HNF1_Q6_01_M01011 TRANSFAC - 70940498 70940518 1.0E-06 AGGCGTTAAGAATTAATCAGA 21 V_CUX1_04_M02959 TRANSFAC + 70939521 70939535 7.0E-06 AAGTTATTATCGCTA 15 V_CUX1_04_M02959 TRANSFAC - 70939521 70939535 2.0E-06 TAGCGATAATAACTT 15 V_HOX13_01_M00023 TRANSFAC + 70939513 70939542 8.0E-06 GGCATATCAAGTTATTATCGCTAACGTTAT 30 V_REX1_03_M01744 TRANSFAC - 70940110 70940121 7.0E-06 CAGATGGCTGCC 12 V_GR_01_M00955 TRANSFAC - 70939310 70939336 1.0E-06 ATTTGTTGAATACCGTGTTCTCATGTG 27 V_SP1SP3_Q4_M01219 TRANSFAC + 70940187 70940197 5.0E-06 CCGCCTCCTCC 11 V_PIT1_01_M01465 TRANSFAC - 70940496 70940512 7.0E-06 TAAGAATTAATCAGATA 17 V_USF_01_M00121 TRANSFAC + 70939715 70939728 5.0E-06 GCATCACGTGACAC 14 V_USF_01_M00121 TRANSFAC - 70939715 70939728 5.0E-06 GTGTCACGTGATGC 14 V_BBX_04_M02843 TRANSFAC + 70939555 70939571 4.0E-06 TGACGGTTAACAATGCA 17 V_ATF1_04_M02842 TRANSFAC + 70939552 70939565 8.0E-06 AAATGACGGTTAAC 14 V_IRX3_01_M01318 TRANSFAC - 70939290 70939306 5.0E-06 CTGCAACATGTTAAATT 17 V_AP1_Q2_01_M00924 TRANSFAC + 70941374 70941385 0.0E+00 TGACTCATGGTT 12 V_IRX5_01_M01472 TRANSFAC - 70939290 70939306 2.0E-06 CTGCAACATGTTAAATT 17 V_VBP_01_M00228 TRANSFAC + 70939455 70939464 7.0E-06 CTTACGTAAT 10 V_VBP_01_M00228 TRANSFAC - 70939455 70939464 7.0E-06 ATTACGTAAG 10 V_ELF1_Q6_M00746 TRANSFAC + 70939544 70939555 5.0E-06 ATATCAGGAAAT 12 V_IRX3_02_M01485 TRANSFAC - 70939290 70939306 8.0E-06 CTGCAACATGTTAAATT 17 V_FXR_IR1_Q6_M00767 TRANSFAC + 70940169 70940181 7.0E-06 AAGTTTCTGTCCT 13 V_IRF5_03_M02769 TRANSFAC + 70939340 70939354 4.0E-06 ATGGAACGAAACTAT 15 V_POU5F1_01_M01307 TRANSFAC + 70939566 70939575 9.0E-06 AATGCAAGAA 10 V_BRN4_01_M01473 TRANSFAC - 70940496 70940512 7.0E-06 TAAGAATTAATCAGATA 17 V_STRA13_01_M00985 TRANSFAC + 70939715 70939728 9.0E-06 GCATCACGTGACAC 14 V_STRA13_01_M00985 TRANSFAC - 70939715 70939728 3.0E-06 GTGTCACGTGATGC 14 V_TFEB_01_M01768 TRANSFAC + 70939717 70939726 2.0E-06 ATCACGTGAC 10 V_TFEB_01_M01768 TRANSFAC - 70939717 70939726 2.0E-06 GTCACGTGAT 10 V_FOXJ3_06_M02855 TRANSFAC + 70939813 70939829 3.0E-06 ACCAACAAAACAGAGAA 17 V_GATA3_02_M00350 TRANSFAC - 70939525 70939534 1.0E-05 AGCGATAATA 10 V_GATA3_02_M00350 TRANSFAC - 70939840 70939849 7.0E-06 AGAGATAATT 10 V_E2F6_01_M01252 TRANSFAC - 70940799 70940806 1.0E-05 CGTTTCTT 8 V_AIRE_01_M00999 TRANSFAC + 70939541 70939566 4.0E-06 ATCATATCAGGAAATGACGGTTAACA 26 V_NFY_01_M00287 TRANSFAC + 70935281 70935296 5.0E-06 ATGCACCAATCAGCTC 16 V_BDP1_01_M01796 TRANSFAC + 70939194 70939205 2.0E-06 GGTCTCGAACTC 12 V_T3RBETA_Q6_01_M02119 TRANSFAC - 70939206 70939222 0.0E+00 GGATCATCTGAGGTCAG 17 V_IRX2_01_M01405 TRANSFAC - 70939290 70939306 7.0E-06 CTGCAACATGTTAAATT 17 V_TBX22_01_M01195 TRANSFAC + 70939283 70939301 3.0E-06 ACTTGTGAATTTAACATGT 19 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 70939202 70939216 7.0E-06 TCTGAGGTCAGGAGT 15 V_CREBP1_01_M00040 TRANSFAC + 70939456 70939463 7.0E-06 TTACGTAA 8 V_CREBP1_01_M00040 TRANSFAC - 70939456 70939463 7.0E-06 TTACGTAA 8 V_DMRT2_01_M01147 TRANSFAC + 70935277 70935292 9.0E-06 TAAAATGCACCAATCA 16 V_SMAD3_Q6_M00701 TRANSFAC + 70940447 70940455 1.0E-05 TGTCTGCCT 9 V_RFX3_04_M02788 TRANSFAC + 70939487 70939509 2.0E-06 AATATTTCTTAGCAACATTTCTG 23 V_ARP1_01_M00155 TRANSFAC + 70939199 70939214 3.0E-06 CGAACTCCTGACCTCA 16 V_TFE_Q6_M01029 TRANSFAC - 70939309 70939316 1.0E-05 TCATGTGA 8 V_IRXB3_01_M01377 TRANSFAC - 70939290 70939306 7.0E-06 CTGCAACATGTTAAATT 17 V_FEV_01_M02269 TRANSFAC + 70939548 70939555 1.0E-05 CAGGAAAT 8 V_STAT1_Q6_M01823 TRANSFAC - 70939875 70939884 8.0E-06 TTCAGGGAAA 10 V_DMRT1_01_M01146 TRANSFAC + 70939496 70939510 1.0E-05 TAGCAACATTTCTGA 15 V_DTYPEPA_B_M00334 TRANSFAC - 70939472 70939481 5.0E-06 ACTATTAAAC 10 V_STAT1_05_M01260 TRANSFAC + 70939575 70939596 6.0E-06 AACTTTTGGGAAATGCTATTTA 22 V_STAT1_05_M01260 TRANSFAC - 70939866 70939887 9.0E-06 TCTTTCAGGGAAAAAGAAGATT 22 V_PAX4_04_M00380 TRANSFAC - 70939848 70939877 4.0E-06 AAAAAGAAGATTAGCAGGCAAAACCACTAG 30 V_T3RALPHA_Q6_M01724 TRANSFAC - 70939206 70939216 5.0E-06 TCTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.