GCM2 target genes for motif:GCM2_GCM_DBD_monomeric_10_1
The GCM2_GCM_DBD_monomeric_10_1 motif was discovered for GCM2 and was found in the SELEX repository.
GCM2 motif sequence logo |
GCM2 motif positions |
GCM2 target gene list
Download all GCM2 TF binding sites
| Gene | Entrez | # of Sites | Strand | Chromosome | Promoter Location | TSS |
|---|
| AGPHD1 |
123688 |
1 |
chr15 |
+ |
78794905-78800405 |
78799905 |
| LMTK3 |
114783 |
1 |
chr19 |
- |
49015946-49021446 |
49016446 |
| APC2 |
10297 |
1 |
chr19 |
+ |
1445147-1450647 |
1450147 |
| CNP |
1267 |
1 |
chr17 |
+ |
40113758-40119258 |
40118758 |
| ZNF587B |
84914 |
1 |
chr19 |
+ |
58356180-58361680 |
58361180 |
| BCLAF1 |
9774 |
1 |
chr6 |
- |
136610489-136615989 |
136610989 |
| NFE2L2 |
4780 |
1 |
chr2 |
- |
178128117-178134859 |
178128617 |
| SYT6 |
148281 |
1 |
chr1 |
- |
114694562-114701472 |
114695062 |
| N6AMT2 |
221143 |
1 |
chr13 |
- |
21347557-21353057 |
21348057 |
| SYF2 |
25949 |
1 |
chr1 |
- |
25558513-25564013 |
25559013 |
| SCN1B |
6324 |
1 |
chr19 |
+ |
35516591-35522091 |
35521591 |
| CPT1B |
1375 |
1 |
chr22 |
- |
51016006-51022096 |
51016506 |
| C3orf32 |
51066 |
1 |
chr3 |
- |
8693264-8698764 |
8693764 |
| RAI1 |
10743 |
1 |
chr17 |
+ |
17579786-17585286 |
17584786 |
| HDHD1 |
8226 |
1 |
chrX |
- |
7065731-7071231 |
7066231 |
| COL19A1 |
1310 |
1 |
chr6 |
+ |
70571447-70576947 |
70576447 |
| PDE4A |
5141 |
1 |
chr19 |
+ |
10522448-10531832 |
10531332 |
| UNC5B |
219699 |
1 |
chr10 |
+ |
72967291-72972791 |
72972291 |
| TNFAIP3 |
7128 |
1 |
chr6 |
+ |
138183324-138188824 |
138188324 |
| THSD1 |
55901 |
1 |
chr13 |
- |
52980129-52985629 |
52980629 |
| RILP |
83547 |
1 |
chr17 |
- |
1552892-1558392 |
1553392 |
| VAMP2 |
6844 |
1 |
chr17 |
- |
8065793-8071293 |
8066293 |
| DFNB59 |
494513 |
2 |
chr2 |
+ |
179311162-179316662 |
179316162 |
| UCHL5 |
51377 |
1 |
chr1 |
- |
193028023-193033523 |
193028523 |
| CACNA2D4 |
93589 |
1 |
chr12 |
- |
2027370-2032870 |
2027870 |
| CRLF3 |
51379 |
1 |
chr17 |
- |
29151278-29156778 |
29151778 |
| BEST2 |
54831 |
1 |
chr19 |
+ |
12858406-12863906 |
12863406 |
| SLC16A1 |
6566 |
1 |
chr1 |
- |
113498185-113503975 |
113498685 |
| ACOX1 |
51 |
1 |
chr17 |
- |
73975015-73980515 |
73975515 |
| FLI1 |
2313 |
1 |
chr11 |
+ |
128551429-128556929 |
128556429 |
| FAM129A |
116496 |
1 |
chr1 |
- |
184943182-184948682 |
184943682 |
| DSC3 |
1825 |
1 |
chr18 |
- |
28622281-28627781 |
28622781 |
| PIGT |
51604 |
1 |
chr20 |
+ |
44039706-44045206 |
44044706 |
| KIF26B |
55083 |
1 |
chr1 |
+ |
245313286-245318786 |
245318286 |
| KIAA1161 |
57462 |
1 |
chr9 |
- |
34376394-34381894 |
34376894 |
| PDLIM7 |
9260 |
1 |
chr5 |
- |
176924102-176929602 |
176924602 |
| MOSPD1 |
56180 |
1 |
chrX |
- |
134048797-134054297 |
134049297 |
| CHKB |
1120 |
1 |
chr22 |
- |
51020928-51026428 |
51021428 |
| MMP14 |
4323 |
1 |
chr14 |
+ |
23300792-23306292 |
23305792 |
| CCR7 |
1236 |
1 |
chr17 |
- |
38721236-38726736 |
38721736 |
| TBCC |
6903 |
1 |
chr6 |
- |
42713384-42718884 |
42713884 |
| SLC12A6 |
9990 |
1 |
chr15 |
- |
34628545-34635265 |
34629045 |
| RHOH |
399 |
1 |
chr4 |
+ |
40193526-40199026 |
40198526 |
| RBM14 |
10432 |
1 |
chr11 |
+ |
66379052-66384552 |
66384052 |
| CDC42EP2 |
10435 |
1 |
chr11 |
+ |
65077288-65082788 |
65082288 |
| ARL4A |
10124 |
1 |
chr7 |
+ |
12721451-12727410 |
12726910 |
| DHCR24 |
1718 |
1 |
chr1 |
- |
55352421-55357921 |
55352921 |
| MLF1IP |
79682 |
1 |
chr4 |
- |
185654786-185660286 |
185655286 |
| MAN2A1 |
4124 |
1 |
chr5 |
+ |
109020155-109025655 |
109025155 |
| AK3 |
50808 |
1 |
chr9 |
- |
4740809-4747043 |
4741309 |
| ~ |
100526737 |
1 |
chr11 |
+ |
66379052-66384552 |
66384052 |
| NELF |
26012 |
1 |
chr9 |
- |
140353286-140358786 |
140353786 |
| RPL37 |
6167 |
1 |
chr5 |
- |
40834887-40840387 |
40835387 |
| VAX2 |
25806 |
1 |
chr2 |
+ |
71122719-71128219 |
71127719 |
| IDH3A |
3419 |
1 |
chr15 |
+ |
78436718-78442218 |
78441718 |
| CYB5A |
1528 |
1 |
chr18 |
- |
71958751-71964251 |
71959251 |
| ERCC6 |
2074 |
1 |
chr10 |
- |
50746647-50752147 |
50747147 |
| ZKSCAN5 |
23660 |
1 |
chr7 |
+ |
99097272-99103072 |
99102572 |
| POLR3H |
171568 |
1 |
chr22 |
- |
41939976-41945479 |
41940476 |
| CUL1 |
8454 |
1 |
chr7 |
+ |
148390932-148396432 |
148395932 |
| ANP32A |
8125 |
1 |
chr15 |
- |
69112761-69118261 |
69113261 |
| CCNG2 |
901 |
1 |
chr4 |
+ |
78073356-78078856 |
78078356 |
| ZNF143 |
7702 |
1 |
chr11 |
+ |
9477511-9483011 |
9482511 |
| ZNF394 |
84124 |
1 |
chr7 |
- |
99097377-99102877 |
99097877 |
| FBXL20 |
84961 |
1 |
chr17 |
- |
37557409-37562909 |
37557909 |
| DHRS7B |
25979 |
1 |
chr17 |
+ |
21025240-21030740 |
21030240 |
| SLC1A1 |
6505 |
1 |
chr9 |
+ |
4485426-4490926 |
4490426 |
| ACADM |
34 |
1 |
chr1 |
+ |
76185042-76190542 |
76190042 |
| RAB13 |
5872 |
1 |
chr1 |
- |
153957342-153963853 |
153957842 |
| NAA16 |
79612 |
1 |
chr13 |
+ |
41880340-41885840 |
41885340 |
| CDKL1 |
8814 |
1 |
chr14 |
- |
50862117-50867617 |
50862617 |
| VEGFA |
7422 |
1 |
chr6 |
+ |
43732945-43738445 |
43737945 |
| ASPSCR1 |
79058 |
1 |
chr17 |
+ |
79930425-79935925 |
79935425 |
| PRRG4 |
79056 |
1 |
chr11 |
+ |
32846480-32851980 |
32851480 |
| H2AFY |
9555 |
1 |
chr5 |
- |
134734428-134740577 |
134734928 |
| SLC2A14 |
144195 |
1 |
chr12 |
- |
8024995-8030495 |
8025495 |
| USP22 |
23326 |
1 |
chr17 |
- |
20945852-20951352 |
20946352 |
| FAM89A |
375061 |
1 |
chr1 |
- |
231175495-231180995 |
231175995 |
| GPBP1 |
65056 |
1 |
chr5 |
+ |
56464774-56471774 |
56471274 |
| SLC6A9 |
6536 |
1 |
chr1 |
- |
44496664-44502164 |
44497164 |
| TROVE2 |
6738 |
1 |
chr1 |
+ |
193023551-193029503 |
193029003 |
| PDCD2 |
5134 |
1 |
chr6 |
- |
170893242-170898780 |
170893742 |
| PAOX |
196743 |
1 |
chr10 |
+ |
135187740-135193240 |
135192740 |
| HSPB7 |
27129 |
1 |
chr1 |
- |
16344785-16350285 |
16345285 |
| ST7 |
7982 |
1 |
chr7 |
+ |
116588380-116593880 |
116593380 |
| SLC2A11 |
66035 |
1 |
chr22 |
+ |
24194058-24200540 |
24200040 |
| SLAIN1 |
122060 |
1 |
chr13 |
+ |
78266988-78273515 |
78273015 |
| IFT88 |
8100 |
1 |
chr13 |
+ |
21136207-21141707 |
21141207 |
| AFAP1 |
60312 |
1 |
chr4 |
- |
7941153-7946653 |
7941653 |
| PRKRA |
8575 |
2 |
chr2 |
- |
179314855-179320958 |
179315355 |
| ARFGEF1 |
10565 |
1 |
chr8 |
- |
68255412-68260912 |
68255912 |
| FAH |
2184 |
1 |
chr15 |
+ |
80440232-80445732 |
80445232 |
| SLU7 |
10569 |
1 |
chr5 |
- |
159845668-159851168 |
159846168 |
| SCARF1 |
8578 |
1 |
chr17 |
- |
1548541-1554041 |
1549041 |
| HRSP12 |
10247 |
1 |
chr8 |
- |
99128918-99134418 |
99129418 |
| PTTG1 |
9232 |
1 |
chr5 |
+ |
159843864-159849364 |
159848864 |
| ITPRIP |
85450 |
1 |
chr10 |
- |
106093163-106103251 |
106093663 |
| ~ |
51237 |
1 |
chr5 |
- |
138725105-138730605 |
138725605 |
| ARHGAP42 |
143872 |
1 |
chr11 |
+ |
100553406-100558906 |
100558406 |
| CSNK1E |
1454 |
1 |
chr22 |
- |
38712913-38719089 |
38713413 |
| C5orf65 |
389333 |
1 |
chr5 |
- |
138730385-138735885 |
138730885 |
| NLGN3 |
54413 |
1 |
chrX |
+ |
70359680-70365180 |
70364680 |
| ZNHIT2 |
741 |
1 |
chr11 |
- |
64884670-64890170 |
64885170 |
| EVC2 |
132884 |
1 |
chr4 |
- |
5709794-5716275 |
5710294 |
| MRPL52 |
122704 |
1 |
chr14 |
+ |
23294091-23299591 |
23299091 |
| STX4 |
6810 |
1 |
chr16 |
+ |
31039415-31045311 |
31044811 |
| FAM43A |
131583 |
1 |
chr3 |
+ |
194401621-194407121 |
194406621 |
| MAGI1 |
9223 |
1 |
chr3 |
- |
66024009-66029509 |
66024509 |
| MED10 |
84246 |
1 |
chr5 |
- |
6378139-6383639 |
6378639 |
| ~ |
100130880 |
1 |
chr7 |
+ |
137633093-137638593 |
137638093 |
| LMNA |
4000 |
1 |
chr1 |
+ |
156079460-156084960 |
156084460 |
| C20orf166 |
128826 |
1 |
chr20 |
+ |
61142659-61148159 |
61147659 |
| DENND3 |
22898 |
1 |
chr8 |
+ |
142133719-142139219 |
142138719 |
| TEN1 |
100134934 |
1 |
chr17 |
+ |
73970297-73975797 |
73975297 |
| GLS |
2744 |
1 |
chr2 |
+ |
191740546-191746046 |
191745546 |
| BAHD1 |
22893 |
1 |
chr15 |
+ |
40728410-40733910 |
40733410 |
| JAM2 |
58494 |
1 |
chr21 |
+ |
27006593-27012093 |
27011593 |
| TMEM88 |
92162 |
1 |
chr17 |
+ |
7753383-7758883 |
7758383 |
| HIPK1 |
204851 |
1 |
chr1 |
+ |
114466995-114472495 |
114471995 |
| TMEM63C |
57156 |
1 |
chr14 |
+ |
77643101-77648601 |
77648101 |
| PAEP |
5047 |
1 |
chr9 |
+ |
138448603-138454103 |
138453603 |
| BCAR3 |
8412 |
1 |
chr1 |
- |
94312206-94317706 |
94312706 |
| PHLDA1 |
22822 |
1 |
chr12 |
- |
76425056-76430556 |
76425556 |
| ZNF598 |
90850 |
1 |
chr16 |
- |
2059322-2064822 |
2059822 |
| EVC |
2121 |
1 |
chr4 |
+ |
5707923-5713423 |
5712923 |
| EPHX3 |
79852 |
1 |
chr19 |
- |
15342731-15348858 |
15343231 |
| ~ |
154881 |
1 |
chr7 |
+ |
66088867-66094367 |
66093867 |
| ~ |
100653515 |
1 |
chr17 |
- |
76898799-76904299 |
76899299 |
| NAB2 |
4665 |
1 |
chr12 |
+ |
57477676-57483176 |
57482676 |
| HOXC4 |
3221 |
1 |
chr12 |
+ |
54405641-54411141 |
54410641 |
| RPL13 |
6137 |
1 |
chr16 |
+ |
89622064-89627618 |
89627118 |
| HOXC6 |
3223 |
1 |
chr12 |
+ |
54405641-54411141 |
54410641 |
| WDR91 |
29062 |
1 |
chr7 |
- |
134895816-134901316 |
134896316 |
| RPS29 |
6235 |
1 |
chr14 |
- |
50052594-50058094 |
50053094 |
| POP1 |
10940 |
1 |
chr8 |
+ |
99124520-99130567 |
99130067 |
| RPS27 |
6232 |
1 |
chr1 |
+ |
153958238-153963738 |
153963238 |
| IFI6 |
2537 |
1 |
chr1 |
- |
27998224-28003724 |
27998724 |
| MUC1 |
4582 |
1 |
chr1 |
- |
155162206-155167706 |
155162706 |
|
