Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

MED10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84246 mediator complex subunit 10 chr5 - 6378139 - 6383639 6378639 Transcription Factor Binding Sites   Download all TFBS in the MED10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GCM1_GCM_DBD_monomeric_10_1 SELEX + 6377477 6377486 1.0E-05 TATGCGGGTT 10 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 6377351 6377360 7.0E-06 ACAATAAAAT 10 SOX21_HMG_DBD_dimeric_15_1 SELEX - 6377350 6377364 1.0E-06 AGGAATTTTATTGTT 15 GCM2_GCM_DBD_monomeric_10_1 SELEX + 6377477 6377486 6.0E-06 TATGCGGGTT 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 6377351 6377360 3.0E-06 ACAATAAAAT 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 6373904 6373920 3.0E-06 AATTTAAGAAAAAATTA 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 6377552 6377568 7.0E-06 CCCTTAAATATTTGTTA 17 ZNF713_C2H2_full_monomeric_17_1 SELEX + 6378307 6378323 1.0E-05 CTGAACACAGCCAGGAA 17 NHLH1_MA0048.1 JASPAR + 6378834 6378845 8.0E-06 GCGCAGCTGGGC 12 SOX8_HMG_full_dimeric_15_1 SELEX - 6377350 6377364 7.0E-06 AGGAATTTTATTGTT 15 EWSR1-FLI1_MA0149.1 JASPAR + 6373783 6373800 1.0E-06 GGAGGAGAGGAAGGCAGA 18 EWSR1-FLI1_MA0149.1 JASPAR - 6379021 6379038 3.0E-06 AGAAAGGAGGCAGGCAGG 18 Sox17_HMG_DBD_dimeric_15_1 SELEX - 6377350 6377364 6.0E-06 AGGAATTTTATTGTT 15 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 6377554 6377567 1.0E-05 AACAAATATTTAAG 14 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 6377350 6377359 3.0E-06 AACAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 6377351 6377359 7.0E-06 ACAATAAAA 9 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 6377350 6377360 4.0E-06 AACAATAAAAT 11 SP4_C2H2_full_monomeric_17_1 SELEX - 6378759 6378775 5.0E-06 TAGGCCCCGCCCCAACA 17 SOX18_HMG_full_dimeric_15_1 SELEX - 6377350 6377364 5.0E-06 AGGAATTTTATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 6377350 6377364 5.0E-06 AACAATAAAATTCCT 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 6373716 6373730 3.0E-06 TTTCGGTTCTGGAAT 15 SOX7_HMG_full_dimeric_17_1 SELEX - 6377349 6377365 4.0E-06 CAGGAATTTTATTGTTA 17 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 6377351 6377360 5.0E-06 ACAATAAAAT 10 CUX2_CUT_DBD_dimeric_18_1 SELEX + 6378927 6378944 8.0E-06 AGCAATACACACATGGAT 18 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 6373808 6373821 5.0E-06 GCTGCACACGGCAA 14 Tp53_p53l_DBD_dimeric_17_1 SELEX - 6377325 6377341 1.0E-05 ACAGGATATTGACAAGT 17 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 6377351 6377360 6.0E-06 ACAATAAAAT 10 Sox11_HMG_DBD_dimeric_15_1 SELEX - 6377350 6377364 7.0E-06 AGGAATTTTATTGTT 15 IRF3_IRF_full_trimeric_21_1 SELEX + 6378203 6378223 5.0E-06 TTGATAGGGAAACGTAAAGTA 21 ETV6_ETS_full_dimeric_15_1 SELEX - 6378657 6378671 2.0E-06 CAGGAAGCGGGAGCG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 6378691 6378705 1.0E-06 GAGGAAACGGAAGTC 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 6377349 6377365 4.0E-06 TAACAATAAAATTCCTG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 6377349 6377365 4.0E-06 CAGGAATTTTATTGTTA 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 6373903 6373920 8.0E-06 CAATTTAAGAAAAAATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 6377350 6377360 6.0E-06 AACAATAAAAT 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 6373863 6373875 2.0E-06 AAATAAAGAAACA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 6377351 6377359 6.0E-06 ACAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 6377351 6377359 6.0E-06 ACAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 6377350 6377360 6.0E-06 AACAATAAAAT 11 SOX9_HMG_full_dimeric_17_1 SELEX - 6377349 6377365 8.0E-06 CAGGAATTTTATTGTTA 17 Zfx_MA0146.1 JASPAR - 6378823 6378836 2.0E-06 CGCGCCGAGGCCTC 14 V_FOXP1_01_M00987 TRANSFAC - 6373868 6373887 2.0E-06 AAATTGGTGTTTTGTTTCTT 20 V_HSF2_01_M00147 TRANSFAC - 6378538 6378547 1.0E-05 AGAACATTCG 10 V_HNF3B_01_M00131 TRANSFAC - 6373866 6373880 7.0E-06 TGTTTTGTTTCTTTA 15 V_DBX1_01_M01483 TRANSFAC + 6373904 6373920 1.0E-05 AATTTAAGAAAAAATTA 17 V_E2F4_04_M02847 TRANSFAC + 6373826 6373842 2.0E-06 CGCATGGCGCCAACAGA 17 V_ZFX_01_M01593 TRANSFAC + 6378820 6378835 2.0E-06 GAGGAGGCCTCGGCGC 16 V_SOX30_03_M02804 TRANSFAC + 6377346 6377361 4.0E-06 CAGTAACAATAAAATT 16 V_SATB1_Q3_M01723 TRANSFAC - 6377547 6377562 8.0E-06 ATATTTAAGGGTATTT 16 V_SP1_Q6_01_M00931 TRANSFAC + 6378763 6378772 4.0E-06 GGGGCGGGGC 10 V_CEBP_01_M00159 TRANSFAC + 6377503 6377515 9.0E-06 TCTTTGGTTAGCT 13 V_HOXD13_01_M01404 TRANSFAC + 6377348 6377363 2.0E-06 GTAACAATAAAATTCC 16 V_PAX_Q6_M00808 TRANSFAC + 6378507 6378517 3.0E-06 CTGGAAGTCAC 11 V_ELF4_04_M02850 TRANSFAC + 6373905 6373921 4.0E-06 ATTTAAGAAAAAATTAC 17 V_HMBOX1_01_M01456 TRANSFAC + 6377385 6377401 6.0E-06 GGCATCTGGTTAATTTC 17 V_SOX13_03_M02797 TRANSFAC + 6377345 6377360 4.0E-06 CCAGTAACAATAAAAT 16 V_GC_01_M00255 TRANSFAC + 6378728 6378741 1.0E-06 TGGGGGCGGAGCCT 14 V_GC_01_M00255 TRANSFAC + 6378761 6378774 4.0E-06 TTGGGGCGGGGCCT 14 V_SOX7_03_M02807 TRANSFAC + 6377343 6377364 2.0E-06 AGCCAGTAACAATAAAATTCCT 22 V_HOXB13_01_M01467 TRANSFAC + 6377348 6377363 4.0E-06 GTAACAATAAAATTCC 16 V_SOX1_04_M02906 TRANSFAC - 6377346 6377360 1.0E-06 ATTTTATTGTTACTG 15 V_SOX1_04_M02906 TRANSFAC + 6377557 6377571 8.0E-06 AAATATTTGTTACTT 15 V_HSF1_01_M00146 TRANSFAC - 6378538 6378547 4.0E-06 AGAACATTCG 10 V_HOXB9_01_M01426 TRANSFAC + 6377348 6377363 3.0E-06 GTAACAATAAAATTCC 16 V_SP1_Q6_M00196 TRANSFAC - 6378296 6378308 4.0E-06 AGAGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 6378728 6378740 6.0E-06 TGGGGGCGGAGCC 13 V_CDX2_01_M01449 TRANSFAC + 6377347 6377362 3.0E-06 AGTAACAATAAAATTC 16 V_MAZ_Q6_01_M02023 TRANSFAC + 6373780 6373793 2.0E-06 CTGGGAGGAGAGGA 14 V_E2F2_04_M02846 TRANSFAC + 6373826 6373842 3.0E-06 CGCATGGCGCCAACAGA 17 V_SFPI1_04_M02896 TRANSFAC + 6373903 6373916 6.0E-06 CAATTTAAGAAAAA 14 V_REST_01_M01256 TRANSFAC - 6377920 6377941 5.0E-06 GCCTTGTGCTGCCCATGTTGCT 22 V_PAX6_Q2_M00979 TRANSFAC + 6378502 6378515 4.0E-06 CTGGGCTGGAAGTC 14 V_KLF7_03_M02773 TRANSFAC - 6378760 6378775 9.0E-06 TAGGCCCCGCCCCAAC 16 V_GCM1_03_M02758 TRANSFAC - 6377474 6377489 8.0E-06 TGTAACCCGCATAGCT 16 V_RFX_Q6_M00975 TRANSFAC - 6378276 6378284 4.0E-06 CTGTTGCCA 9 V_SRF_Q5_02_M01007 TRANSFAC - 6373857 6373875 6.0E-06 TGTTTCTTTATTTGGACTT 19 V_LMO2COM_01_M00277 TRANSFAC + 6378558 6378569 9.0E-06 CTCCAGGTGCTC 12 V_GLI3_Q5_01_M01657 TRANSFAC - 6377418 6377426 6.0E-06 GTGGGTGGT 9 V_AP1_Q2_01_M00924 TRANSFAC - 6373893 6373904 7.0E-06 TGACTCAAATGT 12 V_FOXM1_01_M00630 TRANSFAC - 6373900 6373908 7.0E-06 AAATTGACT 9 V_SOX15_03_M02799 TRANSFAC + 6377345 6377361 4.0E-06 CCAGTAACAATAAAATT 17 V_MTF1_06_M02882 TRANSFAC + 6373864 6373877 8.0E-06 AATAAAGAAACAAA 14 V_MTF1_06_M02882 TRANSFAC + 6373905 6373918 3.0E-06 ATTTAAGAAAAAAT 14 V_FAC1_01_M00456 TRANSFAC + 6373871 6373884 1.0E-06 AAACAAAACACCAA 14 V_TAL1_01_M01591 TRANSFAC + 6377895 6377907 9.0E-06 TTGCCTTTTCTCC 13 V_PLAG1_01_M01778 TRANSFAC + 6378253 6378268 2.0E-06 GGGGCCTCAAAGAGGT 16 V_MAX_04_M02881 TRANSFAC - 6373822 6373835 3.0E-06 GCGCCATGCGACTG 14 V_AIRE_01_M00999 TRANSFAC - 6373846 6373871 6.0E-06 TCTTTATTTGGACTTAACGGCCACTC 26 V_SRF_Q5_01_M00922 TRANSFAC + 6373861 6373875 6.0E-06 CCAAATAAAGAAACA 15 V_SRF_02_M01257 TRANSFAC + 6373859 6373876 9.0E-06 GTCCAAATAAAGAAACAA 18 V_SOX8_03_M02808 TRANSFAC - 6377345 6377361 7.0E-06 AATTTTATTGTTACTGG 17 V_SRF_06_M02916 TRANSFAC + 6373904 6373920 3.0E-06 AATTTAAGAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC + 6373905 6373921 4.0E-06 ATTTAAGAAAAAATTAC 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 6373783 6373800 1.0E-06 GGAGGAGAGGAAGGCAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 6379021 6379038 3.0E-06 AGAAAGGAGGCAGGCAGG 18 V_SOX15_04_M02903 TRANSFAC - 6373886 6373900 5.0E-06 TCAAATGTAGTTCAA 15 V_GLI_Q2_M01037 TRANSFAC - 6377416 6377427 6.0E-06 TGTGGGTGGTGC 12 V_GMEB1_04_M02865 TRANSFAC - 6378236 6378251 2.0E-06 TTGGAGACGTCGTCAT 16 V_SP1_Q4_01_M00932 TRANSFAC - 6378296 6378308 1.0E-06 AGAGGGCGGGGCC 13 V_VMYB_02_M00227 TRANSFAC - 6377532 6377540 6.0E-06 TCTAACGGT 9 V_BRCA_01_M01082 TRANSFAC - 6373836 6373843 1.0E-05 TTCTGTTG 8 V_RORA2_01_M00157 TRANSFAC - 6373886 6373898 8.0E-06 AAATGTAGTTCAA 13 V_DMRT5_01_M01150 TRANSFAC - 6373864 6373878 3.0E-06 TTTTGTTTCTTTATT 15 V_NANOG_02_M01247 TRANSFAC + 6373677 6373696 9.0E-06 ATGACAGGAGAAAAGAACAC 20 V_NANOG_02_M01247 TRANSFAC + 6373865 6373884 1.0E-06 ATAAAGAAACAAAACACCAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.