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CD40LG Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 959 CD40 ligand chrX + 135725335 - 135730835 135730335 Transcription Factor Binding Sites   Download all TFBS in the CD40LG promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX - 135730079 135730093 2.0E-06 GACAATGGCAGTATT 15 GMEB2_SAND_DBD_dimeric_8_2 SELEX + 135730233 135730240 7.0E-06 TTACGTAA 8 GMEB2_SAND_DBD_dimeric_8_2 SELEX - 135730233 135730240 7.0E-06 TTACGTAA 8 Foxa2_MA0047.2 JASPAR + 135725683 135725694 1.0E-05 TGTTGACATTTC 12 SOX4_HMG_DBD_dimeric_16_1 SELEX - 135730079 135730094 2.0E-06 AGACAATGGCAGTATT 16 SOX2_HMG_full_dimeric_17_1 SELEX + 135730078 135730094 5.0E-06 AAATACTGCCATTGTCT 17 SOX8_HMG_full_dimeric_15_1 SELEX - 135730079 135730093 1.0E-06 GACAATGGCAGTATT 15 NFIL3_MA0025.1 JASPAR + 135730233 135730243 2.0E-06 TTACGTAACGT 11 STAT1_MA0137.2 JASPAR + 135730273 135730287 4.0E-06 ATTTTCCAGGAAGTG 15 STAT1_MA0137.2 JASPAR - 135730273 135730287 0.0E+00 CACTTCCTGGAAAAT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 135730079 135730093 6.0E-06 GACAATGGCAGTATT 15 Pax4_MA0068.1 JASPAR + 135730212 135730241 1.0E-05 AAAAAAAAAAACAAAAAACCTTTACGTAAC 30 NR2F1_MA0017.1 JASPAR - 135728897 135728910 1.0E-06 TGAACTTTGATCAG 14 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 135735145 135735162 8.0E-06 AAGTTCACGGAAAGGCTA 18 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 135725698 135725706 5.0E-06 CCCACTTAA 9 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 135728897 135728914 6.0E-06 CTGATCAAAGTTCATCAC 18 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX - 135728897 135728914 8.0E-06 GTGATGAACTTTGATCAG 18 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 135730051 135730064 5.0E-06 AACCCAAAAAGTTA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 135735146 135735162 9.0E-06 AGTTCACGGAAAGGCTA 17 SOX14_HMG_DBD_dimeric_13_1 SELEX + 135730030 135730042 9.0E-06 TCACTTTCCTTGA 13 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 135735146 135735162 1.0E-05 AGTTCACGGAAAGGCTA 17 SOX18_HMG_full_dimeric_15_1 SELEX - 135730079 135730093 6.0E-06 GACAATGGCAGTATT 15 SOX7_HMG_full_dimeric_17_1 SELEX - 135730078 135730094 1.0E-06 AGACAATGGCAGTATTT 17 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 135725698 135725707 5.0E-06 CCCACTTAAA 10 Stat3_MA0144.1 JASPAR - 135730275 135730284 4.0E-06 TTCCTGGAAA 10 Stat3_MA0144.1 JASPAR + 135730276 135730285 1.0E-06 TTCCAGGAAG 10 HNF4A_MA0114.1 JASPAR + 135728898 135728910 4.0E-06 TGATCAAAGTTCA 13 HNF4A_MA0114.1 JASPAR + 135735139 135735151 9.0E-06 GGGCGAAAGTTCA 13 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 135728897 135728910 8.0E-06 CTGATCAAAGTTCA 14 VDR_nuclearreceptor_full_dimeric_16_1 SELEX - 135730040 135730055 8.0E-06 GGGTTCACCAGTTTCA 16 Sox3_HMG_DBD_dimeric_17_1 SELEX - 135730078 135730094 1.0E-06 AGACAATGGCAGTATTT 17 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 135730310 135730319 2.0E-06 ATTAGTTAAG 10 SOX9_HMG_full_dimeric_17_1 SELEX - 135730078 135730094 1.0E-06 AGACAATGGCAGTATTT 17 V_DMRT4_01_M01149 TRANSFAC - 135730024 135730036 3.0E-06 AAAGTGACAAATT 13 V_CEBPG_Q6_M00622 TRANSFAC - 135731188 135731200 3.0E-06 ACCATTTAAAAAT 13 RXR_RAR_DR5_MA0159.1 JASPAR + 135735146 135735162 3.0E-06 AGTTCACGGAAAGGCTA 17 V_KLF15_Q2_M01714 TRANSFAC + 135735090 135735103 1.0E-06 GAGGTGGGGAGTGA 14 V_STAT5A_Q6_M01890 TRANSFAC + 135730272 135730284 5.0E-06 CATTTTCCAGGAA 13 V_DBX1_01_M01483 TRANSFAC - 135731186 135731202 8.0E-06 TAACCATTTAAAAATGT 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 135725682 135725693 4.0E-06 AAATGTCAACAG 12 V_IRF2_Q6_M01882 TRANSFAC + 135729991 135730006 7.0E-06 TTGAAATTGAAATAAG 16 V_NFAT3_Q3_M01734 TRANSFAC + 135730271 135730280 1.0E-05 ACATTTTCCA 10 V_NFAT3_Q3_M01734 TRANSFAC + 135735327 135735336 3.0E-06 ACATTTTCCT 9 V_STAT5B_01_M00459 TRANSFAC + 135730273 135730287 5.0E-06 ATTTTCCAGGAAGTG 15 V_STAT5B_01_M00459 TRANSFAC - 135730273 135730287 8.0E-06 CACTTCCTGGAAAAT 15 V_HNF4A_03_M02220 TRANSFAC + 135728898 135728910 4.0E-06 TGATCAAAGTTCA 13 V_HNF4A_03_M02220 TRANSFAC + 135735139 135735151 9.0E-06 GGGCGAAAGTTCA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 135728898 135728910 3.0E-06 TGAACTTTGATCA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 135735139 135735151 7.0E-06 TGAACTTTCGCCC 13 V_AIRE_02_M01000 TRANSFAC + 135731187 135731211 1.0E-06 CATTTTTAAATGGTTAGACTTGCAG 25 V_TCFAP2E_04_M02926 TRANSFAC + 135735104 135735117 1.0E-06 AGCAAGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 135735106 135735119 3.0E-06 CAAGAAAAAAAAAA 14 V_PPARGRXRA_01_M02262 TRANSFAC + 135735137 135735151 7.0E-06 TTGGGCGAAAGTTCA 15 V_HMBOX1_01_M01456 TRANSFAC - 135730307 135730323 1.0E-05 CAGGATTAGTTAAGAGC 17 V_GC_01_M00255 TRANSFAC - 135725584 135725597 8.0E-06 TGGGGGTGGAGCCT 14 V_GFI1_01_M00250 TRANSFAC - 135731132 135731155 4.0E-06 GCAACTACAATCAGTGCTTGTGAA 24 V_HNF4_01_B_M00411 TRANSFAC + 135728897 135728911 7.0E-06 CTGATCAAAGTTCAT 15 V_COUP_01_M00158 TRANSFAC - 135728897 135728910 1.0E-06 TGAACTTTGATCAG 14 V_NKX31_02_M02782 TRANSFAC + 135725694 135725710 1.0E-06 CCTACCCACTTAAACAG 17 V_NKX31_02_M02782 TRANSFAC + 135735062 135735078 9.0E-06 AAAGTCCACTTTAAAAA 17 V_IRF2_01_M00063 TRANSFAC + 135725564 135725576 6.0E-06 CAAGAGTGAAACC 13 V_IRX4_01_M01410 TRANSFAC - 135731180 135731196 6.0E-06 TTTAAAAATGTAAAACA 17 V_TATA_C_M00216 TRANSFAC + 135735069 135735078 6.0E-06 ACTTTAAAAA 10 V_OCT1_04_M00138 TRANSFAC - 135731175 135731197 1.0E-06 ATTTAAAAATGTAAAACATCTCA 23 V_TEL2_Q6_M00678 TRANSFAC - 135730279 135730288 8.0E-06 ACACTTCCTG 10 V_NKX3A_01_M00451 TRANSFAC + 135735073 135735084 5.0E-06 TAAAAAGTATTT 12 V_NCX_02_M01420 TRANSFAC - 135731186 135731202 3.0E-06 TAACCATTTAAAAATGT 17 V_HNF4A_Q6_01_M02016 TRANSFAC + 135728899 135728913 1.0E-06 GATCAAAGTTCATCA 15 V_HNF4_DR1_Q3_M00764 TRANSFAC - 135728898 135728910 3.0E-06 TGAACTTTGATCA 13 V_STAT4_Q5_M02117 TRANSFAC - 135730034 135730043 5.0E-06 TTCAAGGAAA 10 V_STAT3_03_M01595 TRANSFAC + 135730274 135730289 1.0E-06 TTTTCCAGGAAGTGTG 16 V_NKX32_02_M01482 TRANSFAC + 135725694 135725710 1.0E-06 CCTACCCACTTAAACAG 17 V_NKX32_02_M01482 TRANSFAC + 135735062 135735078 7.0E-06 AAAGTCCACTTTAAAAA 17 V_VBP_01_M00228 TRANSFAC - 135730232 135730241 7.0E-06 GTTACGTAAA 10 V_MTF1_06_M02882 TRANSFAC + 135735106 135735119 9.0E-06 CAAGAAAAAAAAAA 14 V_DR1_Q3_M00762 TRANSFAC + 135728898 135728910 6.0E-06 TGATCAAAGTTCA 13 V_OCT1_Q6_M00195 TRANSFAC - 135731179 135731193 1.0E-05 AAAAATGTAAAACAT 15 V_HNF4_Q6_01_M01031 TRANSFAC + 135728898 135728911 1.0E-06 TGATCAAAGTTCAT 14 V_HNF1B_01_M01425 TRANSFAC + 135730306 135730322 5.0E-06 CGCTCTTAACTAATCCT 17 V_STAT1STAT1_Q3_M01212 TRANSFAC - 135730033 135730045 1.0E-06 GTTTCAAGGAAAG 13 V_STAT1STAT1_Q3_M01212 TRANSFAC + 135730274 135730286 4.0E-06 TTTTCCAGGAAGT 13 V_FOXA2_03_M02260 TRANSFAC + 135725683 135725694 1.0E-05 TGTTGACATTTC 12 V_ETS1_B_M00339 TRANSFAC + 135730278 135730292 6.0E-06 CCAGGAAGTGTGGGC 15 V_RXR_RAR_01_M02272 TRANSFAC + 135735146 135735162 3.0E-06 AGTTCACGGAAAGGCTA 17 V_RARA_03_M02787 TRANSFAC + 135728899 135728914 8.0E-06 GATCAAAGTTCATCAC 16 V_CREBP1_01_M00040 TRANSFAC + 135730233 135730240 7.0E-06 TTACGTAA 8 V_CREBP1_01_M00040 TRANSFAC - 135730233 135730240 7.0E-06 TTACGTAA 8 V_STAT5A_01_M00457 TRANSFAC + 135730273 135730287 8.0E-06 ATTTTCCAGGAAGTG 15 V_SRF_06_M02916 TRANSFAC + 135735105 135735121 3.0E-06 GCAAGAAAAAAAAAAGG 17 V_SRF_06_M02916 TRANSFAC + 135735106 135735122 2.0E-06 CAAGAAAAAAAAAAGGC 17 V_SRF_06_M02916 TRANSFAC + 135735107 135735123 5.0E-06 AAGAAAAAAAAAAGGCT 17 V_HLF_01_M00260 TRANSFAC - 135730232 135730241 7.0E-06 GTTACGTAAA 10 V_YY1_01_M00059 TRANSFAC - 135731188 135731204 3.0E-06 TCTAACCATTTAAAAAT 17 V_DR3_Q4_M00966 TRANSFAC - 135728901 135728921 3.0E-06 GATGCACGTGATGAACTTTGA 21 V_IRF1_01_M00062 TRANSFAC + 135725564 135725576 7.0E-06 CAAGAGTGAAACC 13 V_BARHL2_01_M01446 TRANSFAC - 135731189 135731204 9.0E-06 TCTAACCATTTAAAAA 16 V_FREAC4_01_M00292 TRANSFAC - 135725679 135725694 5.0E-06 GAAATGTCAACAGTCA 16 V_TCF3_05_M02920 TRANSFAC + 135735103 135735117 4.0E-06 AAGCAAGAAAAAAAA 15 V_GLIS2_04_M02863 TRANSFAC + 135725555 135725568 4.0E-06 AATATTAGTCAAGA 14 V_STAT1_05_M01260 TRANSFAC - 135730025 135730046 7.0E-06 AGTTTCAAGGAAAGTGACAAAT 22 V_STAT1_05_M01260 TRANSFAC + 135730273 135730294 1.0E-06 ATTTTCCAGGAAGTGTGGGCTG 22 PPARG_RXRA_MA0065.2 JASPAR + 135735137 135735151 7.0E-06 TTGGGCGAAAGTTCA 15 V_OCT4_01_M01125 TRANSFAC - 135731182 135731196 4.0E-06 TTTAAAAATGTAAAA 15 V_OTX3_01_M01403 TRANSFAC - 135730311 135730327 2.0E-06 TACTCAGGATTAGTTAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.