Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 84717 hepatoma-derived growth factor-related protein 2 chr19 + 4467254 - 4472754 4472254 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX - 4471328 4471341 3.0E-06 AAATACAGGAAGTA 14 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 4471992 4472008 6.0E-06 GAGGTTATGGGAGGTGA 17 CUX1_CUT_DBD_dimeric_17_1 SELEX - 4471665 4471681 8.0E-06 ATCGAAAGAAGAGCGAT 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 4471992 4472009 7.0E-06 GGAGGTTATGGGAGGTGA 18 NFYA_MA0060.1 JASPAR - 4472084 4472099 8.0E-06 GGCGACCAATAAGAAC 16 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 4474783 4474794 9.0E-06 TGACAGCTGCCG 12 Pax4_MA0068.1 JASPAR - 4471016 4471045 1.0E-06 GAAAAAAAAAAGCTATAACTCTACCTTCCG 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 4471328 4471341 1.0E-06 AAATACAGGAAGTA 14 Spz1_MA0111.1 JASPAR + 4471280 4471290 7.0E-06 GGGGTTACAGC 11 ETV2_ETS_DBD_monomeric_11_1 SELEX - 4471337 4471347 2.0E-06 AACAGGAAATA 11 SP1_MA0079.2 JASPAR + 4472226 4472235 7.0E-06 CCCCGCCCCC 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 4471980 4471994 1.0E-06 TGAAAGGGAAAGGTG 15 ERF_ETS_DBD_monomeric_10_1 SELEX - 4471328 4471337 1.0E-05 ACAGGAAGTA 10 FEV_MA0156.1 JASPAR - 4471338 4471345 1.0E-05 CAGGAAAT 8 ELF5_ETS_full_monomeric_11_1 SELEX - 4471337 4471347 9.0E-06 AACAGGAAATA 11 SPI1_ETS_full_monomeric_14_1 SELEX - 4471328 4471341 1.0E-06 AAATACAGGAAGTA 14 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 4471241 4471255 5.0E-06 CGGATCACGAGGTCA 15 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 4471533 4471542 6.0E-06 CTTAGTTAAA 10 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 4471652 4471663 8.0E-06 CAACATAAAACA 12 Zfx_MA0146.1 JASPAR + 4472323 4472336 5.0E-06 GCGGCCTGGGCCTC 14 V_SPI1_01_M01203 TRANSFAC - 4471325 4471341 1.0E-06 AAATACAGGAAGTATTA 17 V_AHRARNT_01_M00235 TRANSFAC + 4471150 4471165 7.0E-06 GTATAGGTGCGTGCCA 16 V_ETS_B_M00340 TRANSFAC - 4471325 4471338 0.0E+00 TACAGGAAGTATTA 14 V_SPIB_02_M02041 TRANSFAC - 4471328 4471337 3.0E-06 ACAGGAAGTA 10 V_ESE1_01_M01977 TRANSFAC - 4471337 4471346 8.0E-06 ACAGGAAATA 10 V_HOXA13_02_M01297 TRANSFAC - 4471653 4471661 7.0E-06 ACATAAAAC 9 V_IRF_Q6_01_M00972 TRANSFAC - 4471983 4471993 9.0E-06 GAAAGGGAAAG 11 V_SP1_03_M02281 TRANSFAC + 4472226 4472235 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 4471165 4471176 7.0E-06 ACCACGCCCAGC 12 V_PU1_Q4_M01172 TRANSFAC + 4471322 4471340 9.0E-06 TTCTAATACTTCCTGTATT 19 V_PU1_Q4_M01172 TRANSFAC - 4471540 4471558 7.0E-06 AATAGTTATTTCTTCACTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 4471036 4471049 1.0E-06 AGCAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 4471539 4471552 6.0E-06 TAAGTGAAGAAATA 14 V_CDX_Q5_M00991 TRANSFAC - 4471027 4471044 2.0E-06 AAAAAAAAAAGCTATAAC 18 V_CETS1P54_02_M00074 TRANSFAC - 4471327 4471339 4.0E-06 ATACAGGAAGTAT 13 V_CETS1P54_02_M00074 TRANSFAC - 4471336 4471348 5.0E-06 CAACAGGAAATAC 13 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 4471234 4471248 6.0E-06 CGAGGTCAGGAGTTT 15 V_HNF1_C_M00206 TRANSFAC - 4471539 4471555 1.0E-06 AGTTATTTCTTCACTTA 17 V_RPC155_01_M01798 TRANSFAC - 4471228 4471243 0.0E+00 TCAGGAGTTTGAGACC 16 V_SPIC_01_M02042 TRANSFAC - 4471328 4471337 4.0E-06 ACAGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC - 4471455 4471471 9.0E-06 ATTCAAGAAAAATGTAC 17 V_ZNF219_01_M01122 TRANSFAC + 4474859 4474870 2.0E-06 CACCCCCCACCC 12 V_GC_01_M00255 TRANSFAC - 4471706 4471719 0.0E+00 AAGAGGCGGGGCTT 14 V_GC_01_M00255 TRANSFAC - 4471935 4471948 1.0E-06 AAGGGGTGGAGCTT 14 V_MECP2_01_M01298 TRANSFAC - 4471338 4471352 5.0E-06 CCGGCAACAGGAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 4471032 4471046 8.0E-06 AGAAAAAAAAAAGCT 15 V_FLI1_02_M02073 TRANSFAC - 4471328 4471337 9.0E-06 ACAGGAAGTA 10 V_E2F1_01_M01250 TRANSFAC + 4474845 4474852 1.0E-05 CGTTTCTT 8 V_HNF1_Q6_01_M01011 TRANSFAC + 4471538 4471558 9.0E-06 CTAAGTGAAGAAATAACTATT 21 V_SZF11_01_M01109 TRANSFAC + 4471278 4471292 1.0E-06 CCGGGGTTACAGCCG 15 V_ELF5_01_M01197 TRANSFAC - 4471328 4471338 8.0E-06 TACAGGAAGTA 11 V_ELF5_01_M01197 TRANSFAC - 4471337 4471347 3.0E-06 AACAGGAAATA 11 V_HBP1_03_M02762 TRANSFAC + 4471463 4471478 0.0E+00 TTCTTGAATGAATGAA 16 V_HBP1_03_M02762 TRANSFAC + 4471467 4471482 0.0E+00 TGAATGAATGAATAGG 16 V_MEF2_04_M00233 TRANSFAC - 4471569 4471590 7.0E-06 GCTCTTAGTATAAACAGCCACA 22 V_GRE_C_M00205 TRANSFAC + 4471866 4471881 1.0E-06 GGTATCCAATGTTCTG 16 V_SPIB_01_M01204 TRANSFAC - 4471325 4471341 0.0E+00 AAATACAGGAAGTATTA 17 V_TEL2_Q6_M00678 TRANSFAC + 4471327 4471336 2.0E-06 ATACTTCCTG 10 V_PAX8_01_M00717 TRANSFAC + 4471461 4471475 5.0E-06 TTTTCTTGAATGAAT 15 V_OCAB_Q6_M02113 TRANSFAC - 4471774 4471784 9.0E-06 ATATGCAAGCC 11 V_XFD2_01_M00268 TRANSFAC - 4471571 4471584 2.0E-06 AGTATAAACAGCCA 14 V_NCX_02_M01420 TRANSFAC - 4471528 4471544 7.0E-06 CACTTAGTTAAAAACTT 17 V_CETS1P54_01_M00032 TRANSFAC - 4471328 4471337 1.0E-06 ACAGGAAGTA 10 V_CETS1P54_01_M00032 TRANSFAC - 4471337 4471346 1.0E-05 ACAGGAAATA 10 V_STAT4_Q5_M02117 TRANSFAC - 4471927 4471936 1.0E-05 TTAAGGGAAA 10 V_ISGF4G_04_M02875 TRANSFAC - 4471523 4471536 1.0E-05 TAAAAACTTAACTG 14 V_CETS1P54_03_M01078 TRANSFAC - 4471325 4471340 4.0E-06 AATACAGGAAGTATTA 16 V_GATA4_Q3_M00632 TRANSFAC - 4471648 4471659 5.0E-06 ATAAAACAGGGA 12 V_SP4_Q5_M01273 TRANSFAC + 4472225 4472235 5.0E-06 CCCCCGCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC - 4471329 4471340 2.0E-06 AATACAGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC - 4471338 4471349 5.0E-06 GCAACAGGAAAT 12 V_FXR_IR1_Q6_M00767 TRANSFAC + 4471909 4471921 4.0E-06 AGGTCTATGTCCT 13 V_MYOD_Q6_02_M02100 TRANSFAC - 4474783 4474791 4.0E-06 CAGCTGTCA 9 V_MYF6_04_M02885 TRANSFAC - 4471958 4471972 4.0E-06 ACGAACAGACGCTCT 15 V_TAL1_01_M01591 TRANSFAC + 4471853 4471865 1.0E-05 CCTTCTTTTCTGC 13 V_TAL1_01_M01591 TRANSFAC + 4472099 4472111 2.0E-06 CTCCCTTCTCTGT 13 V_TAL1_01_M01591 TRANSFAC + 4474671 4474683 8.0E-06 CTCGCTTTTCTCT 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 4474816 4474824 8.0E-06 GAGGGTGGG 9 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 4474864 4474872 8.0E-06 GAGGGTGGG 9 V_LUN1_01_M00480 TRANSFAC - 4471136 4471152 7.0E-06 TACCAGCTACTCAGGAA 17 V_PLAG1_01_M01778 TRANSFAC + 4474197 4474212 1.0E-06 GGGGCAGCAGGGAGGG 16 V_PLAG1_01_M01778 TRANSFAC + 4474210 4474225 2.0E-06 GGGGCTGTGGAGGGGG 16 V_MYOGNF1_01_M00056 TRANSFAC + 4471622 4471650 4.0E-06 CGCCTCCTCGAGCTGGCAATCGCCCGTCC 29 V_E2F6_01_M01252 TRANSFAC + 4474845 4474852 1.0E-05 CGTTTCTT 8 V_NFY_01_M00287 TRANSFAC - 4472084 4472099 6.0E-06 GGCGACCAATAAGAAC 16 V_HNF1B_01_M01425 TRANSFAC + 4471529 4471545 4.0E-06 AGTTTTTAACTAAGTGA 17 V_T3RBETA_Q6_01_M02119 TRANSFAC - 4471991 4472007 7.0E-06 AGGTTATGGGAGGTGAA 17 V_ETS1_B_M00339 TRANSFAC - 4471323 4471337 3.0E-06 ACAGGAAGTATTAGA 15 V_BBX_03_M02739 TRANSFAC - 4471463 4471477 4.0E-06 TCATTCATTCAAGAA 15 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 4471236 4471250 8.0E-06 CACGAGGTCAGGAGT 15 V_ZFP281_04_M02831 TRANSFAC + 4474855 4474869 2.0E-06 AGCCCACCCCCCACC 15 V_CETS1_02_M02063 TRANSFAC - 4471328 4471337 9.0E-06 ACAGGAAGTA 10 V_SRF_06_M02916 TRANSFAC - 4471031 4471047 1.0E-06 CAGAAAAAAAAAAGCTA 17 V_SRF_06_M02916 TRANSFAC - 4471032 4471048 0.0E+00 GCAGAAAAAAAAAAGCT 17 V_VDR_Q3_M00444 TRANSFAC - 4471992 4472006 1.0E-05 GGTTATGGGAGGTGA 15 V_VDR_Q3_M00444 TRANSFAC - 4474681 4474695 6.0E-06 GGGGGACGGGGGAGA 15 V_SP1_Q2_01_M00933 TRANSFAC + 4472226 4472235 4.0E-06 CCCCGCCCCC 10 V_TCF3_05_M02920 TRANSFAC - 4471035 4471049 0.0E+00 AGCAGAAAAAAAAAA 15 V_FEV_01_M02269 TRANSFAC - 4471338 4471345 1.0E-05 CAGGAAAT 8 V_MIF1_01_M00279 TRANSFAC - 4474723 4474740 7.0E-06 CAGGTGCTTGGAAACGTT 18 V_PAX4_04_M00380 TRANSFAC - 4471017 4471046 7.0E-06 AGAAAAAAAAAAGCTATAACTCTACCTTCC 30 V_SPI1_02_M02043 TRANSFAC - 4471328 4471337 4.0E-06 ACAGGAAGTA 10 V_PAX6_01_M00097 TRANSFAC + 4471459 4471479 1.0E-05 ATTTTTCTTGAATGAATGAAT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.