Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SPACA1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
81833 chr6 +88752506 - 88762506 0

Transcription Factor Binding Sites

 
Download all TFBS in the SPACA1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CUX1_CUT_DBD_monomeric_10_1 SELEX - 88758557 88758566 2.0E-06 TAATCAATAT 10
PAX6_PAX_DBD_monomeric_19_1 SELEX + 88759164 88759182 4.0E-06 TTTCATGCATAAGTGCTTT 19
SOX10_HMG_full_dimeric_15_3 SELEX + 88760470 88760484 1.0E-06 TTAAATTTTAGTCAT 15
Tp53_p53l_DBD_dimeric_18_1 SELEX + 88758538 88758555 5.0E-06 ACAGGCTGTTGTACATGT 18
IRF7_IRF_DBD_dimeric_14_1 SELEX + 88760249 88760262 9.0E-06 CAAAAAATGAAAAA 14
Pax6_MA0069.1 JASPAR + 88759165 88759178 4.0E-06 TTCATGCATAAGTG 14
ZNF713_C2H2_full_monomeric_17_1 SELEX + 88760283 88760299 1.0E-05 TCAATAAAAGCCAAAAA 17
SOX21_HMG_DBD_dimeric_13_2 SELEX + 88760471 88760483 1.0E-06 TAAATTTTAGTCA 13
SOX2_HMG_full_dimeric_17_1 SELEX + 88760423 88760439 8.0E-06 TCACCATTACATTATTT 17
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 88760292 88760303 3.0E-06 GCCAAAAATAGA 12
SOX9_HMG_full_dimeric_17_3 SELEX + 88760469 88760485 0.0E+00 TTTAAATTTTAGTCATT 17
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 88760375 88760385 4.0E-06 TATGAAAACAT 11
ZNF232_C2H2_full_monomeric_19_1 SELEX + 88758448 88758466 5.0E-06 ATGCTACATATTAACCAAG 19
SOX7_HMG_full_dimeric_17_2 SELEX + 88760469 88760485 0.0E+00 TTTAAATTTTAGTCATT 17
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 88760292 88760303 4.0E-06 GCCAAAAATAGA 12
MEF2B_MADS_full_dimeric_12_1 SELEX + 88760292 88760303 3.0E-06 GCCAAAAATAGA 12
IRF1_MA0050.1 JASPAR - 88760460 88760471 5.0E-06 AAAAATGAAAGA 12
Sox17_HMG_DBD_dimeric_15_2 SELEX + 88760470 88760484 0.0E+00 TTAAATTTTAGTCAT 15
Sox17_HMG_DBD_dimeric_15_2 SELEX - 88760470 88760484 5.0E-06 ATGACTAAAATTTAA 15
ONECUT1_CUT_full_monomeric_14_1 SELEX - 88758556 88758569 7.0E-06 TACTAATCAATATG 14
CUX2_CUT_DBD_monomeric_10_1 SELEX - 88758557 88758566 2.0E-06 TAATCAATAT 10
MEF2A_MA0052.1 JASPAR - 88760293 88760302 8.0E-06 CTATTTTTGG 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 88758558 88758572 1.0E-05 TATTGATTAGTAACT 15
ONECUT2_CUT_DBD_monomeric_14_1 SELEX - 88758556 88758569 9.0E-06 TACTAATCAATATG 14
ATF4_bZIP_DBD_dimeric_13_1 SELEX + 88760347 88760359 0.0E+00 AGATGATGCAATA 13
Atf4_bZIP_DBD_dimeric_14_1 SELEX + 88760346 88760359 0.0E+00 AAGATGATGCAATA 14
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 88760447 88760463 4.0E-06 CAATTCCAATCATTCTT 17
POU1F1_POU_DBD_monomeric_17_1 SELEX + 88759165 88759181 6.0E-06 TTCATGCATAAGTGCTT 17
Pou5f1_MA0142.1 JASPAR + 88760461 88760475 8.0E-06 CTTTCATTTTTAAAT 15
SOX18_HMG_full_dimeric_15_3 SELEX + 88760470 88760484 1.0E-06 TTAAATTTTAGTCAT 15
Sox3_HMG_DBD_dimeric_17_3 SELEX + 88760469 88760485 1.0E-06 TTTAAATTTTAGTCATT 17
Sox1_HMG_DBD_dimeric_15_2 SELEX - 88760470 88760484 7.0E-06 ATGACTAAAATTTAA 15
HNF1A_MA0046.1 JASPAR - 88758559 88758572 4.0E-06 AGTTACTAATCAAT 14
ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 88758556 88758569 8.0E-06 TACTAATCAATATG 14
V_MEIS1_02_M01419 TRANSFAC + 88758410 88758425 3.0E-06 AAACACCTGTCAAGGG 16
V_DBX1_01_M01483 TRANSFAC - 88760464 88760480 5.0E-06 CTAAAATTTAAAAATGA 17
V_DBX1_01_M01483 TRANSFAC + 88760478 88760494 2.0E-06 TAGTCATTTAAAAATGT 17
V_ZFP187_03_M02830 TRANSFAC - 88759148 88759161 8.0E-06 GTATGTATTAAAAT 14
V_PREP1_01_M01459 TRANSFAC + 88758410 88758425 2.0E-06 AAACACCTGTCAAGGG 16
V_TCF3_01_M01594 TRANSFAC - 88760250 88760262 5.0E-06 TTTTTCATTTTTT 13
V_TCF3_01_M01594 TRANSFAC + 88760460 88760472 1.0E-06 TCTTTCATTTTTA 13
V_BCL6_Q3_01_M02085 TRANSFAC - 88760339 88760348 3.0E-06 CTTTCAAGAA 10
V_DMRT3_01_M01148 TRANSFAC + 88759148 88759162 5.0E-06 ATTTTAATACATACT 15
V_NF1_Q6_01_M00806 TRANSFAC + 88760282 88760298 3.0E-06 TTCAATAAAAGCCAAAA 17
V_BCL6_01_M01183 TRANSFAC + 88760462 88760477 7.0E-06 TTTCATTTTTAAATTT 16
V_LMAF_Q2_M01139 TRANSFAC + 88758592 88758600 6.0E-06 GGTCAGCAG 9
V_POU5F1_02_M02245 TRANSFAC + 88760461 88760475 8.0E-06 CTTTCATTTTTAAAT 15
V_MEF2_02_M00231 TRANSFAC + 88760286 88760307 2.0E-06 ATAAAAGCCAAAAATAGACTAC 22
V_ZTA_Q2_M00711 TRANSFAC - 88759095 88759107 1.0E-06 AAACTGTGACTCA 13
V_IRF_Q6_01_M00972 TRANSFAC + 88760251 88760261 2.0E-06 AAAAATGAAAA 11
V_IRF_Q6_01_M00972 TRANSFAC - 88760461 88760471 1.0E-06 AAAAATGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 88760458 88760473 1.0E-06 TTAAAAATGAAAGAAT 16
V_HNF3_Q6_01_M01012 TRANSFAC + 88760430 88760447 9.0E-06 TACATTATTTTTCTAGGC 18
V_PRX2_Q2_M02115 TRANSFAC + 88759062 88759070 2.0E-06 TCAAATTAA 9
V_HOXD13_01_M01404 TRANSFAC + 88760280 88760295 5.0E-06 TGTTCAATAAAAGCCA 16
V_TCFAP2E_04_M02926 TRANSFAC - 88758501 88758514 6.0E-06 AGCAGAAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 88758502 88758515 8.0E-06 CAGCAGAAAAAAAA 14
V_CEBPB_01_M00109 TRANSFAC + 88760260 88760273 0.0E+00 AAATTGTGAAATCT 14
V_CEBPB_01_M00109 TRANSFAC + 88760347 88760360 1.0E-06 AGATGATGCAATAT 14
V_HNF6_Q6_M00639 TRANSFAC - 88758557 88758568 5.0E-06 ACTAATCAATAT 12
V_SOX7_03_M02807 TRANSFAC - 88760322 88760343 9.0E-06 AAGAAGATACAAAAGAAGTCTA 22
V_MEIS2_01_M01488 TRANSFAC + 88758410 88758425 2.0E-06 AAACACCTGTCAAGGG 16
V_CEBPE_Q6_M01868 TRANSFAC - 88760262 88760275 8.0E-06 TGAGATTTCACAAT 14
V_ZFP410_03_M02832 TRANSFAC + 88760380 88760396 8.0E-06 AAACATGGGATGTTGTA 17
V_ARID5A_03_M02736 TRANSFAC - 88760467 88760480 7.0E-06 CTAAAATTTAAAAA 14
V_HNF1_Q6_M00790 TRANSFAC - 88758447 88758464 2.0E-06 TGGTTAATATGTAGCATC 18
V_HNF1_Q6_M00790 TRANSFAC - 88758556 88758573 6.0E-06 GAGTTACTAATCAATATG 18
V_HNF1_Q6_M00790 TRANSFAC + 88759080 88759097 1.0E-06 TAGTTACTTATTCTCTGA 18
V_NKX31_02_M02782 TRANSFAC - 88759168 88759184 5.0E-06 AAAAAGCACTTATGCAT 17
V_NKX26_01_M01322 TRANSFAC - 88759168 88759183 9.0E-06 AAAAGCACTTATGCAT 16
V_NKX61_01_M00424 TRANSFAC - 88759061 88759073 2.0E-06 ATTTTAATTTGAA 13
V_RSRFC4_Q2_M00407 TRANSFAC + 88760290 88760306 3.0E-06 AAGCCAAAAATAGACTA 17
V_IRX4_01_M01410 TRANSFAC - 88758544 88758560 3.0E-06 ATATGACATGTACAACA 17
V_IRX4_01_M01410 TRANSFAC + 88758545 88758561 9.0E-06 GTTGTACATGTCATATT 17
V_IRF_Q6_M00772 TRANSFAC - 88760251 88760265 5.0E-06 CAATTTTTCATTTTT 15
V_IRF_Q6_M00772 TRANSFAC + 88760457 88760471 1.0E-06 CATTCTTTCATTTTT 15
V_STAT5A_02_M00460 TRANSFAC + 88759122 88759145 8.0E-06 TTCAAGGAATCCATGTACTTTGTG 24
V_HNF1_Q6_01_M01011 TRANSFAC + 88758446 88758466 0.0E+00 AGATGCTACATATTAACCAAG 21
V_HNF1_Q6_01_M01011 TRANSFAC - 88759078 88759098 4.0E-06 CTCAGAGAATAAGTAACTAAC 21
V_HNF1_Q6_01_M01011 TRANSFAC - 88760465 88760485 7.0E-06 AATGACTAAAATTTAAAAATG 21
V_MEF2_03_M00232 TRANSFAC + 88760286 88760307 1.0E-05 ATAAAAGCCAAAAATAGACTAC 22
V_CLOX_01_M00103 TRANSFAC + 88758556 88758570 1.0E-06 CATATTGATTAGTAA 15
V_OCT1_04_M00138 TRANSFAC - 88759141 88759163 9.0E-06 TAGTATGTATTAAAATCCCACAA 23
V_OCT1_04_M00138 TRANSFAC - 88760467 88760489 7.0E-06 TTTAAATGACTAAAATTTAAAAA 23
V_OCT1_04_M00138 TRANSFAC + 88760475 88760497 7.0E-06 TTTTAGTCATTTAAAAATGTAGT 23
V_HBP1_03_M02762 TRANSFAC - 88760455 88760470 4.0E-06 AAAATGAAAGAATGAT 16
V_PPARG_03_M00528 TRANSFAC + 88758580 88758596 2.0E-06 TAGCAGGTAGAAGGTCA 17
V_DAX1_01_M01248 TRANSFAC + 88758583 88758602 6.0E-06 CAGGTAGAAGGTCAGCAGCA 20
V_PAX8_01_M00717 TRANSFAC - 88759164 88759178 1.0E-06 CACTTATGCATGAAA 15
V_CDP_02_M00102 TRANSFAC + 88758556 88758570 2.0E-06 CATATTGATTAGTAA 15
V_NCX_02_M01420 TRANSFAC - 88760464 88760480 9.0E-06 CTAAAATTTAAAAATGA 17
V_NCX_02_M01420 TRANSFAC + 88760478 88760494 2.0E-06 TAGTCATTTAAAAATGT 17
V_TBP_06_M02814 TRANSFAC + 88760463 88760478 5.0E-06 TTCATTTTTAAATTTT 16
V_TBP_06_M02814 TRANSFAC - 88760465 88760480 3.0E-06 CTAAAATTTAAAAATG 16
V_IRX3_01_M01318 TRANSFAC - 88758544 88758560 9.0E-06 ATATGACATGTACAACA 17
V_IRX3_01_M01318 TRANSFAC + 88758545 88758561 4.0E-06 GTTGTACATGTCATATT 17
V_IRX5_01_M01472 TRANSFAC - 88758544 88758560 3.0E-06 ATATGACATGTACAACA 17
V_IRX5_01_M01472 TRANSFAC + 88758545 88758561 4.0E-06 GTTGTACATGTCATATT 17
V_LIM1_01_M01418 TRANSFAC + 88758556 88758572 8.0E-06 CATATTGATTAGTAACT 17
V_PAX8_B_M00328 TRANSFAC - 88759162 88759179 0.0E+00 GCACTTATGCATGAAATA 18
V_NKX32_02_M01482 TRANSFAC - 88759168 88759184 1.0E-06 AAAAAGCACTTATGCAT 17
V_IRX3_02_M01485 TRANSFAC - 88758544 88758560 4.0E-06 ATATGACATGTACAACA 17
V_IRX3_02_M01485 TRANSFAC + 88758545 88758561 2.0E-06 GTTGTACATGTCATATT 17
V_MRG2_01_M01395 TRANSFAC + 88758410 88758425 3.0E-06 AAACACCTGTCAAGGG 16
V_PKNOX2_01_M01411 TRANSFAC + 88758410 88758425 3.0E-06 AAACACCTGTCAAGGG 16
V_CEBPA_01_M00116 TRANSFAC - 88760347 88760360 4.0E-06 ATATTGCATCATCT 14
V_HNF1_01_M00132 TRANSFAC - 88758449 88758463 3.0E-06 GGTTAATATGTAGCA 15
V_HNF1_01_M00132 TRANSFAC - 88758558 88758572 4.0E-06 AGTTACTAATCAATA 15
V_TCF7_04_M02921 TRANSFAC - 88759145 88759159 8.0E-06 ATGTATTAAAATCCC 15
V_RSRFC4_01_M00026 TRANSFAC - 88760290 88760305 4.0E-06 AGTCTATTTTTGGCTT 16
V_PLZF_02_M01075 TRANSFAC - 88759042 88759070 2.0E-06 TTAATTTGAAGGTAAGACATTATAACTTT 29
V_PLZF_02_M01075 TRANSFAC + 88760459 88760487 5.0E-06 TTCTTTCATTTTTAAATTTTAGTCATTTA 29
V_CEBPB_Q6_M01896 TRANSFAC + 88760263 88760272 7.0E-06 TTGTGAAATC 10
V_CEBPB_Q6_M01896 TRANSFAC + 88760350 88760359 5.0E-06 TGATGCAATA 10
V_OCT1_06_M00162 TRANSFAC - 88758549 88758562 1.0E-06 CAATATGACATGTA 14
V_OCT1_06_M00162 TRANSFAC - 88760252 88760265 8.0E-06 CAATTTTTCATTTT 14
V_IRX2_01_M01405 TRANSFAC + 88758545 88758561 9.0E-06 GTTGTACATGTCATATT 17
V_OCT1_07_M00248 TRANSFAC - 88759065 88759076 6.0E-06 TACATTTTAATT 12
V_IRF1_Q6_01_M01881 TRANSFAC - 88760250 88760263 2.0E-06 ATTTTTCATTTTTT 14
V_IRF1_Q6_01_M01881 TRANSFAC + 88760459 88760472 2.0E-06 TTCTTTCATTTTTA 14
V_HNF1A_Q5_M02013 TRANSFAC + 88759081 88759091 4.0E-06 AGTTACTTATT 11
V_IRF1_01_M00062 TRANSFAC - 88760460 88760472 4.0E-06 TAAAAATGAAAGA 13
V_PIT1_Q6_M00802 TRANSFAC + 88760461 88760478 6.0E-06 CTTTCATTTTTAAATTTT 18
V_CEBP_Q2_01_M00912 TRANSFAC - 88760260 88760271 0.0E+00 ATTTCACAATTT 12
V_HNF1A_01_M02162 TRANSFAC - 88758559 88758572 4.0E-06 AGTTACTAATCAAT 14
V_IRXB3_01_M01377 TRANSFAC - 88758544 88758560 9.0E-06 ATATGACATGTACAACA 17
V_IRXB3_01_M01377 TRANSFAC + 88758545 88758561 5.0E-06 GTTGTACATGTCATATT 17
V_PBX1_04_M01357 TRANSFAC - 88758554 88758570 7.0E-06 TTACTAATCAATATGAC 17
V_DMRT5_01_M01150 TRANSFAC + 88759078 88759092 4.0E-06 GTTAGTTACTTATTC 15
V_PAX6_01_M00097 TRANSFAC + 88759161 88759181 2.0E-06 CTATTTCATGCATAAGTGCTT 21
V_NANOG_02_M01247 TRANSFAC - 88760455 88760474 2.0E-06 TTTAAAAATGAAAGAATGAT 20
V_OCT4_01_M01125 TRANSFAC + 88760461 88760475 7.0E-06 CTTTCATTTTTAAAT 15
V_OCT4_01_M01125 TRANSFAC + 88760476 88760490 5.0E-06 TTTAGTCATTTAAAA 15
V_HSF1_Q6_01_M02017 TRANSFAC + 88760334 88760347 4.0E-06 GTATCTTCTTGAAA 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL