Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

UPK3B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 80761 uroplakin 3B chr7 + 76134744 - 76140244 76139744 Transcription Factor Binding Sites   Download all TFBS in the UPK3B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX - 76137560 76137572 0.0E+00 TTCCAGAACCTTC 13 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 76144327 76144336 1.0E-05 GACATATGTC 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 76144327 76144336 1.0E-05 GACATATGTC 10 HES5_bHLH_DBD_dimeric_12_1 SELEX + 76144304 76144315 1.0E-05 CAGCACGTGCCC 12 IRF7_IRF_DBD_dimeric_14_1 SELEX - 76137539 76137552 3.0E-06 CCCAAAACGAAACA 14 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 3.0E-06 TGTCAGCTGTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 1.0E-06 TGACAGCTGACA 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 76137411 76137421 8.0E-06 ACAAAAGGTCA 11 HSF1_HSF_full_trimeric_13_1 SELEX - 76137560 76137572 0.0E+00 TTCCAGAACCTTC 13 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 76137413 76137425 2.0E-06 AAAAGGTCACATG 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 76137593 76137603 6.0E-06 TATATCAACAA 11 EWSR1-FLI1_MA0149.1 JASPAR + 76137352 76137369 7.0E-06 AAAAGGAATGAAGCAATC 18 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 76139857 76139869 3.0E-06 AGCCCCTGGGGCA 13 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 2.0E-06 TGTCAGCTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 0.0E+00 TGACAGCTGACA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 2.0E-06 TGTCAGCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 0.0E+00 TGACAGCTGACA 12 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX - 76139360 76139368 5.0E-06 GCCACTTAA 9 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 76137521 76137530 1.0E-06 ATTAAACGGT 10 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 76139857 76139869 8.0E-06 TGCCCCAGGGGCT 13 IRF1_MA0050.1 JASPAR - 76137539 76137550 7.0E-06 CAAAACGAAACA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 1.0E-06 TGTCAGCTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 1.0E-06 TGACAGCTGACA 12 NKX3-1_homeodomain_full_monomeric_9_1 SELEX - 76139360 76139368 8.0E-06 GCCACTTAA 9 HSF4_HSF_DBD_trimeric_13_1 SELEX - 76137560 76137572 0.0E+00 TTCCAGAACCTTC 13 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 76144326 76144337 1.0E-05 AGACATATGTCC 12 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 76137521 76137530 1.0E-06 ATTAAACGGT 10 SP1_C2H2_DBD_monomeric_11_1 SELEX - 76139822 76139832 7.0E-06 ACCCCACCCCC 11 PRDM4_C2H2_full_monomeric_13_1 SELEX - 76137380 76137392 4.0E-06 TTTCAAGGTTCCT 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 76139857 76139869 1.0E-06 AGCCCCTGGGGCA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 76139857 76139869 9.0E-06 TGCCCCAGGGGCT 13 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 76139597 76139613 1.0E-06 ACATGCCTGAGATTCCT 17 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 76139359 76139368 7.0E-06 GCCACTTAAA 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 76144327 76144336 6.0E-06 GACATATGTC 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 76144327 76144336 6.0E-06 GACATATGTC 10 Nkx3-2_MA0122.1 JASPAR + 76139360 76139368 8.0E-06 TTAAGTGGC 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 76137525 76137533 8.0E-06 CCCATTAAA 9 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 76139374 76139385 1.0E-06 TGTCAGCTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 76139374 76139385 1.0E-06 TGACAGCTGACA 12 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 76139857 76139869 3.0E-06 AGCCCCTGGGGCA 13 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 2.0E-06 TGTCAGCTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 0.0E+00 TGACAGCTGACA 12 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 76144327 76144336 1.0E-06 GACATATGTC 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 76144327 76144336 1.0E-06 GACATATGTC 10 MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 76139373 76139386 0.0E+00 TTGTCAGCTGTCAA 14 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 76139373 76139386 0.0E+00 TTGACAGCTGACAA 14 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 76139374 76139385 4.0E-06 TGTCAGCTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 76139374 76139385 0.0E+00 TGACAGCTGACA 12 V_MEIS1_02_M01419 TRANSFAC + 76139374 76139389 8.0E-06 TGTCAGCTGTCAAGGG 16 V_FOXP3_Q4_M00992 TRANSFAC - 76137404 76137420 5.0E-06 GACCTTTTGTGTCTGGC 17 V_HSF1_Q6_M01023 TRANSFAC - 76137557 76137573 0.0E+00 ATTCCAGAACCTTCTTA 17 V_SMAD3_Q6_01_M01888 TRANSFAC + 76137403 76137415 6.0E-06 AGCCAGACACAAA 13 V_DMRT3_01_M01148 TRANSFAC - 76137390 76137404 0.0E+00 CTTTTGTTACTTTTT 15 V_NR2F2_03_M02783 TRANSFAC + 76137410 76137425 2.0E-06 CACAAAAGGTCACATG 16 V_SPZ1_01_M00446 TRANSFAC - 76139636 76139650 6.0E-06 GGAGGAGGGTCTGGC 15 V_SPZ1_01_M00446 TRANSFAC + 76144738 76144752 1.0E-06 TCAGGAGGGTTTAGG 7 V_NERF_Q2_M00531 TRANSFAC + 76139813 76139830 9.0E-06 TGGGAGGAAGGGGGTGGG 18 V_SP1_02_M01303 TRANSFAC + 76139823 76139833 5.0E-06 GGGGTGGGGTG 11 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 76142392 76142407 1.0E-06 CATCCCCAGGGTGAAG 16 V_LDSPOLYA_B_M00317 TRANSFAC - 76139317 76139332 7.0E-06 TATGTGTGTATTTTTC 16 V_TGIF2_01_M01407 TRANSFAC + 76139374 76139389 1.0E-05 TGTCAGCTGTCAAGGG 16 V_RPC155_01_M01798 TRANSFAC + 76138896 76138911 1.0E-06 TCAGGAATTTGAGACC 16 V_MEIS2_01_M01488 TRANSFAC + 76139374 76139389 9.0E-06 TGTCAGCTGTCAAGGG 16 V_FOXA2_02_M02853 TRANSFAC + 76137391 76137405 1.0E-06 AAAAGTAACAAAAGC 15 V_HNF1_Q6_M00790 TRANSFAC - 76137384 76137401 1.0E-05 TTGTTACTTTTTCAAGGT 18 V_ZBP89_Q4_M01816 TRANSFAC + 76142374 76142383 2.0E-06 TCCTCCCCCA 10 V_CEBPD_Q6_M00621 TRANSFAC - 76137358 76137369 5.0E-06 GATTGCTTCATT 12 V_CEBPB_02_M00117 TRANSFAC + 76137580 76137593 1.0E-05 TGGTTGCACAACCT 14 V_MAZ_Q6_01_M02023 TRANSFAC - 76142369 76142382 1.0E-06 GGGGGAGGAGGGGA 14 V_SFPI1_04_M02896 TRANSFAC - 76137563 76137576 3.0E-06 CCAATTCCAGAACC 14 V_SP1SP3_Q4_M01219 TRANSFAC - 76141686 76141696 5.0E-06 CCGCCTCCTCC 11 V_KLF7_03_M02773 TRANSFAC - 76139820 76139835 9.0E-06 TGCACCCCACCCCCTT 16 V_SP1_01_M00008 TRANSFAC + 76141690 76141699 7.0E-06 GAGGCGGGGT 10 V_NR1B1_Q6_M02110 TRANSFAC + 76137414 76137423 3.0E-06 AAAGGTCACA 10 V_HOXD9_Q2_M01834 TRANSFAC - 76137525 76137534 5.0E-06 ACCCATTAAA 10 V_TFIII_Q6_M00706 TRANSFAC + 76139569 76139577 6.0E-06 AGAGGGAGG 9 V_MYOD_Q6_02_M02100 TRANSFAC + 76139377 76139385 4.0E-06 CAGCTGTCA 9 V_HAND1E47_01_M00222 TRANSFAC - 76137401 76137416 0.0E+00 TTTTGTGTCTGGCTTT 16 V_HAND1E47_01_M00222 TRANSFAC + 76137559 76137574 1.0E-05 AGAAGGTTCTGGAATT 16 V_HAND1E47_01_M00222 TRANSFAC - 76139633 76139648 4.0E-06 AGGAGGGTCTGGCTTT 16 V_CPHX_01_M01478 TRANSFAC + 76137359 76137372 9.0E-06 ATGAAGCAATCACA 14 V_SMAD3_03_M02794 TRANSFAC + 76137400 76137416 0.0E+00 AAAAGCCAGACACAAAA 17 V_FPM315_01_M01587 TRANSFAC - 76142371 76142382 1.0E-06 GGGGGAGGAGGG 12 V_ZFP281_01_M01597 TRANSFAC + 76139821 76139831 5.0E-06 AGGGGGTGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 76142373 76142383 9.0E-06 TGGGGGAGGAG 11 V_HSF_Q6_M00641 TRANSFAC - 76137560 76137572 3.0E-06 TTCCAGAACCTTC 13 V_RARA_03_M02787 TRANSFAC + 76137410 76137425 1.0E-06 CACAAAAGGTCACATG 16 V_HSF2_02_M01244 TRANSFAC + 76137560 76137572 0.0E+00 GAAGGTTCTGGAA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 76137352 76137369 7.0E-06 AAAAGGAATGAAGCAATC 18 V_DTYPEPA_B_M00334 TRANSFAC - 76137524 76137533 6.0E-06 CCCATTAAAC 10 V_DMRT5_01_M01150 TRANSFAC - 76137389 76137403 0.0E+00 TTTTGTTACTTTTTC 15 V_NANOG_02_M01247 TRANSFAC + 76137390 76137409 4.0E-06 AAAAAGTAACAAAAGCCAGA 20 V_HSF1_Q6_01_M02017 TRANSFAC + 76137560 76137573 2.0E-06 GAAGGTTCTGGAAT 14 V_HSF1_Q6_01_M02017 TRANSFAC - 76142872 76142885 5.0E-06 GAAACTTCTGGGCT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.