Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PAQR6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79957 progestin and adipoQ receptor family member VI chr1 - 156217408 - 156222908 156217908 Transcription Factor Binding Sites   Download all TFBS in the PAQR6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RFX4_RFX_DBD_dimeric_16_1 SELEX + 156217659 156217674 4.0E-06 AGTTGCTATGGAAATG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 156217659 156217674 2.0E-06 CATTTCCATAGCAACT 16 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 156216195 156216210 3.0E-06 TACCCACAACCCACAA 16 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX - 156221414 156221422 5.0E-06 GCCACTTAA 9 RFX2_RFX_DBD_dimeric_15_1 SELEX + 156217659 156217673 1.0E-05 AGTTGCTATGGAAAT 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 156217659 156217674 1.0E-06 AGTTGCTATGGAAATG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 156217659 156217674 7.0E-06 CATTTCCATAGCAACT 16 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 156216195 156216210 1.0E-05 TACCCACAACCCACAA 16 NKX3-1_homeodomain_full_monomeric_9_1 SELEX - 156221414 156221422 8.0E-06 GCCACTTAA 9 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 156215186 156215197 7.0E-06 TATCCCCACATA 12 SP1_MA0079.2 JASPAR - 156217674 156217683 3.0E-06 CCCCTCCCCC 10 FOXI1_MA0042.1 JASPAR - 156216210 156216221 5.0E-06 TCCTATTTGTTT 12 RFX2_RFX_DBD_dimeric_16_1 SELEX + 156217659 156217674 2.0E-06 AGTTGCTATGGAAATG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 156217659 156217674 2.0E-06 CATTTCCATAGCAACT 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 156217659 156217674 6.0E-06 AGTTGCTATGGAAATG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 156217659 156217674 1.0E-06 CATTTCCATAGCAACT 16 ERF_ETS_DBD_monomeric_10_1 SELEX + 156215768 156215777 1.0E-05 ACAGGAAGTA 10 Nkx3-2_MA0122.1 JASPAR + 156221414 156221422 8.0E-06 TTAAGTGGC 9 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 156215186 156215197 6.0E-06 TATCCCCACATA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX - 156221463 156221476 1.0E-05 CCAAATAATTGATG 14 RREB1_MA0073.1 JASPAR + 156216198 156216217 2.0E-06 CCACAACCCACAAAACAAAT 20 ZNF784_C2H2_full_monomeric_10_1 SELEX + 156222702 156222711 6.0E-06 GTACTTACCT 10 Zfx_MA0146.1 JASPAR + 156217858 156217871 4.0E-06 GCGGGCCAGGCCTG 14 Zfx_MA0146.1 JASPAR - 156217864 156217877 1.0E-06 CCCGCCCAGGCCTG 14 V_FOXP1_01_M00987 TRANSFAC - 156216200 156216219 5.0E-06 CTATTTGTTTTGTGGGTTGT 20 V_AREB6_01_M00412 TRANSFAC + 156222703 156222715 2.0E-06 TACTTACCTGTCC 13 V_HNF3B_01_M00131 TRANSFAC - 156216209 156216223 2.0E-06 TTTCCTATTTGTTTT 15 V_ZFX_01_M01593 TRANSFAC - 156215882 156215897 7.0E-06 CCCCAGGCCGCGGCCT 16 V_ZFX_01_M01593 TRANSFAC - 156217859 156217874 4.0E-06 GCCCAGGCCTGGCCCG 16 V_ZFX_01_M01593 TRANSFAC + 156217861 156217876 1.0E-06 GGCCAGGCCTGGGCGG 16 V_ETS_B_M00340 TRANSFAC + 156215920 156215933 1.0E-06 GGCAGGAAGTGAGT 14 V_SPIB_02_M02041 TRANSFAC + 156215768 156215777 3.0E-06 ACAGGAAGTA 10 V_RFX4_03_M02789 TRANSFAC - 156217657 156217671 3.0E-06 TTCCATAGCAACTGC 15 V_AP2_Q6_01_M00915 TRANSFAC - 156215481 156215493 6.0E-06 CGCCCCTCAGGCC 13 V_IRF3_05_M02767 TRANSFAC + 156216213 156216226 4.0E-06 CAAATAGGAAACCG 14 V_HNF3_Q6_01_M01012 TRANSFAC - 156216206 156216223 1.0E-06 TTTCCTATTTGTTTTGTG 18 V_SP1_03_M02281 TRANSFAC - 156217674 156217683 3.0E-06 CCCCTCCCCC 10 V_NKX24_01_M01350 TRANSFAC - 156221410 156221425 0.0E+00 GAAGCCACTTAAGAAT 16 V_GM497_04_M02864 TRANSFAC - 156217647 156217662 0.0E+00 AACTGCACACACTCCA 16 V_ETS_Q4_M00771 TRANSFAC - 156215769 156215780 6.0E-06 AGGTACTTCCTG 12 V_SPIC_01_M02042 TRANSFAC + 156215768 156215777 4.0E-06 ACAGGAAGTA 10 V_SPI1_03_M02078 TRANSFAC + 156215603 156215612 6.0E-06 CGAGGAAGTA 10 V_DBX2_01_M01360 TRANSFAC + 156221460 156221475 3.0E-06 TAACATCAATTATTTG 16 V_FLI1_02_M02073 TRANSFAC + 156215768 156215777 9.0E-06 ACAGGAAGTA 10 V_CART1_01_M00416 TRANSFAC - 156221457 156221474 0.0E+00 AAATAATTGATGTTATCA 18 V_GATA3_05_M02859 TRANSFAC + 156221451 156221472 5.0E-06 TCCTCCTGATAACATCAATTAT 22 V_GATA3_05_M02859 TRANSFAC - 156221452 156221473 7.0E-06 AATAATTGATGTTATCAGGAGG 22 V_NKX31_02_M02782 TRANSFAC - 156221410 156221426 1.0E-06 GGAAGCCACTTAAGAAT 17 V_NKX26_01_M01322 TRANSFAC - 156221410 156221425 0.0E+00 GAAGCCACTTAAGAAT 16 V_ZBP89_Q4_M01816 TRANSFAC - 156217673 156217682 4.0E-06 CCCTCCCCCA 10 V_AP2BETA_Q3_M01858 TRANSFAC + 156215476 156215491 0.0E+00 GCTGAGGCCTGAGGGG 16 V_HNF3_Q6_M00791 TRANSFAC + 156216208 156216220 4.0E-06 CAAAACAAATAGG 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 156216208 156216218 1.0E-06 TATTTGTTTTG 11 V_LEF1_03_M02878 TRANSFAC + 156221460 156221475 1.0E-06 TAACATCAATTATTTG 16 V_NKX22_02_M01372 TRANSFAC - 156221409 156221425 1.0E-06 GAAGCCACTTAAGAATG 17 V_MATH1_Q2_M01716 TRANSFAC - 156215911 156215920 9.0E-06 CCACCTGGTG 10 V_NKX52_01_M01315 TRANSFAC + 156221461 156221477 8.0E-06 AACATCAATTATTTGGT 17 V_ISRE_01_M00258 TRANSFAC - 156216212 156216226 9.0E-06 CGGTTTCCTATTTGT 15 V_SOX12_04_M02900 TRANSFAC + 156221320 156221335 2.0E-06 CCTTACACAAAGCAGT 16 V_RREB1_01_M00257 TRANSFAC + 156218167 156218180 5.0E-06 ACCCAAATCCCCAA 14 V_CETS1P54_01_M00032 TRANSFAC + 156215768 156215777 1.0E-06 ACAGGAAGTA 10 V_POU6F1_01_M00465 TRANSFAC + 156221462 156221472 5.0E-06 ACATCAATTAT 11 V_NKX63_01_M01470 TRANSFAC - 156221461 156221477 9.0E-06 ACCAAATAATTGATGTT 17 V_FOXO1_Q5_M01216 TRANSFAC + 156216208 156216216 8.0E-06 CAAAACAAA 9 V_ELK1_01_M00007 TRANSFAC + 156215918 156215933 5.0E-06 TGGGCAGGAAGTGAGT 16 V_NKX32_02_M01482 TRANSFAC - 156221410 156221426 4.0E-06 GGAAGCCACTTAAGAAT 17 V_CETS1P54_03_M01078 TRANSFAC + 156215918 156215933 8.0E-06 TGGGCAGGAAGTGAGT 16 V_EHF_03_M02052 TRANSFAC + 156215603 156215612 7.0E-06 CGAGGAAGTA 10 V_GATA1_05_M00346 TRANSFAC + 156221455 156221464 5.0E-06 CCTGATAACA 10 V_NKX25_03_M01414 TRANSFAC - 156221410 156221425 1.0E-06 GAAGCCACTTAAGAAT 16 V_GABPBETA_Q3_M01876 TRANSFAC + 156215768 156215778 5.0E-06 ACAGGAAGTAC 11 V_FAC1_01_M00456 TRANSFAC + 156216196 156216209 8.0E-06 ACCCACAACCCACA 14 V_FAC1_01_M00456 TRANSFAC + 156216203 156216216 1.0E-06 ACCCACAAAACAAA 14 V_FAC1_01_M00456 TRANSFAC + 156216205 156216218 2.0E-06 CCACAAAACAAATA 14 V_T3R_Q6_M00963 TRANSFAC + 156222709 156222717 7.0E-06 CCTGTCCTT 9 V_CPHX_01_M01478 TRANSFAC + 156221456 156221469 1.0E-06 CTGATAACATCAAT 14 V_TCF7L2_04_M02922 TRANSFAC + 156221460 156221475 4.0E-06 TAACATCAATTATTTG 16 V_MSX1_02_M01412 TRANSFAC + 156221460 156221475 8.0E-06 TAACATCAATTATTTG 16 V_SPIC_02_M02077 TRANSFAC + 156215209 156215218 6.0E-06 AGAGGAAGTC 10 V_SPIC_02_M02077 TRANSFAC + 156215603 156215612 5.0E-06 CGAGGAAGTA 10 V_BARX2_01_M01431 TRANSFAC - 156221460 156221475 1.0E-06 CAAATAATTGATGTTA 16 V_PBX1_03_M01017 TRANSFAC + 156221462 156221473 3.0E-06 ACATCAATTATT 12 V_ETS1_B_M00339 TRANSFAC + 156215768 156215782 0.0E+00 ACAGGAAGTACCTGC 15 V_ETS1_B_M00339 TRANSFAC + 156215921 156215935 0.0E+00 GCAGGAAGTGAGTCC 15 V_ZFP281_01_M01597 TRANSFAC + 156217673 156217683 1.0E-06 TGGGGGAGGGG 11 V_CETS1_02_M02063 TRANSFAC + 156215768 156215777 9.0E-06 ACAGGAAGTA 10 V_HFH3_01_M00289 TRANSFAC - 156216209 156216221 5.0E-06 TCCTATTTGTTTT 13 V_FOXJ2_01_M00422 TRANSFAC + 156216206 156216223 5.0E-06 CACAAAACAAATAGGAAA 18 V_EFC_Q6_M00626 TRANSFAC + 156217659 156217672 0.0E+00 AGTTGCTATGGAAA 14 V_RFX3_04_M02788 TRANSFAC - 156217653 156217675 7.0E-06 CCATTTCCATAGCAACTGCACAC 23 V_ARP1_01_M00155 TRANSFAC - 156215874 156215889 7.0E-06 CGCGGCCTTGAGCTCA 16 V_P300_01_M00033 TRANSFAC + 156215921 156215934 9.0E-06 GCAGGAAGTGAGTC 14 V_TAACC_B_M00331 TRANSFAC + 156216209 156216231 1.0E-06 AAAACAAATAGGAAACCGAAGAG 23 V_MIF1_01_M00279 TRANSFAC - 156217657 156217674 7.0E-06 CATTTCCATAGCAACTGC 18 V_SPI1_02_M02043 TRANSFAC + 156215768 156215777 4.0E-06 ACAGGAAGTA 10 V_SPIB_03_M02076 TRANSFAC + 156215209 156215218 7.0E-06 AGAGGAAGTC 10 V_SPIB_03_M02076 TRANSFAC + 156215603 156215612 5.0E-06 CGAGGAAGTA 10 V_NKX21_01_M01312 TRANSFAC - 156221410 156221425 1.0E-06 GAAGCCACTTAAGAAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.