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HPS6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79803 Hermansky-Pudlak syndrome 6 chr10 + 103820123 - 103825623 103825123 Transcription Factor Binding Sites   Download all TFBS in the HPS6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GMEB2_SAND_DBD_dimeric_8_2 SELEX + 103824450 103824457 7.0E-06 TTACGTAA 8 GMEB2_SAND_DBD_dimeric_8_2 SELEX - 103824450 103824457 7.0E-06 TTACGTAA 8 NFIA_NFI_full_dimeric_15_1 SELEX - 103828158 103828172 4.0E-06 CTGGCATGGAGCCAG 15 TEF_bZIP_DBD_dimeric_12_1 SELEX + 103824448 103824459 2.0E-06 AGTTACGTAATC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 103824448 103824459 2.0E-06 GATTACGTAACT 12 FOXD1_MA0031.1 JASPAR - 103824719 103824726 7.0E-06 GTAAACAT 8 SOX8_HMG_full_dimeric_15_1 SELEX + 103828991 103829005 6.0E-06 GACAGTTCCAGTCTT 15 HLF_bZIP_full_dimeric_12_1 SELEX + 103824448 103824459 2.0E-06 AGTTACGTAATC 12 HLF_bZIP_full_dimeric_12_1 SELEX - 103824448 103824459 3.0E-06 GATTACGTAACT 12 NFIX_NFI_full_dimeric_15_2 SELEX + 103828158 103828172 3.0E-06 CTGGCTCCATGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 103828158 103828172 5.0E-06 CTGGCATGGAGCCAG 15 NFIL3_MA0025.1 JASPAR - 103824447 103824457 3.0E-06 TTACGTAACTT 11 NFIL3_MA0025.1 JASPAR + 103824450 103824460 3.0E-06 TTACGTAATCT 11 DBP_bZIP_full_dimeric_12_1 SELEX + 103824448 103824459 2.0E-06 AGTTACGTAATC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 103824448 103824459 2.0E-06 GATTACGTAACT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 103824448 103824459 3.0E-06 GATTACGTAACT 12 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 103824419 103824427 2.0E-06 ACCACTTAA 9 SPIB_ETS_DBD_monomeric_14_1 SELEX - 103829039 103829052 1.0E-05 AAGAAGAGGAACTC 14 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 103825798 103825809 6.0E-06 AGCCCGAAGGCA 12 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 103824419 103824427 2.0E-06 ACCACTTAA 9 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 103824720 103824733 2.0E-06 GGAAATAGTAAACA 14 Gata1_MA0035.2 JASPAR - 103824476 103824486 0.0E+00 ACAGATAAGGA 11 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 103824448 103824459 3.0E-06 AGTTACGTAATC 12 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 103824448 103824459 2.0E-06 GATTACGTAACT 12 FEV_MA0156.1 JASPAR - 103824824 103824831 1.0E-05 CAGGAAAT 8 NFIB_NFI_full_dimeric_15_1 SELEX + 103828158 103828172 4.0E-06 CTGGCTCCATGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 103828158 103828172 4.0E-06 CTGGCATGGAGCCAG 15 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 103825798 103825809 5.0E-06 AGCCCGAAGGCA 12 Tp53_p53l_DBD_dimeric_17_1 SELEX - 103822924 103822940 7.0E-06 ACATGTCCTAAACATCA 17 HLF_MA0043.1 JASPAR + 103824448 103824459 4.0E-06 AGTTACGTAATC 12 HLF_MA0043.1 JASPAR - 103824448 103824459 4.0E-06 GATTACGTAACT 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 103824419 103824429 2.0E-06 ACCACTTAATA 11 REST_MA0138.2 JASPAR - 103829041 103829061 7.0E-06 TTCAAGACCAAGAAGAGGAAC 21 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX + 103824440 103824449 4.0E-06 CTTAGTTAAG 10 NFE2L2_MA0150.1 JASPAR - 103829113 103829123 3.0E-06 ATGATTAAGCA 11 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 103824419 103824429 6.0E-06 ACCACTTAATA 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 103824720 103824733 1.0E-06 GGAAATAGTAAACA 14 V_OSR1_03_M02784 TRANSFAC - 103828955 103828970 3.0E-06 AAGAACAGTAGCTTGA 16 V_EVI1_05_M00082 TRANSFAC + 103824351 103824361 2.0E-06 TGATATGATAA 11 V_GATA1_Q6_M02004 TRANSFAC - 103824475 103824489 2.0E-06 TTTACAGATAAGGAG 15 V_XFD1_01_M00267 TRANSFAC - 103824716 103824729 7.0E-06 ATAGTAAACATGGC 14 V_ZFP410_04_M02936 TRANSFAC - 103822907 103822923 1.0E-06 TCTTCCTGCCCCAAACT 17 V_FOXA2_04_M02749 TRANSFAC - 103824715 103824731 4.0E-06 AAATAGTAAACATGGCT 17 V_HNF1_02_M01379 TRANSFAC - 103824438 103824454 1.0E-06 CGTAACTTAACTAAGAT 17 V_HNF1_02_M01379 TRANSFAC + 103824439 103824455 6.0E-06 TCTTAGTTAAGTTACGT 17 V_SOX30_03_M02804 TRANSFAC - 103829116 103829131 7.0E-06 AAGCAACAATGATTAA 16 V_BCL6_01_M01183 TRANSFAC - 103822740 103822755 8.0E-06 TCACTTAGAAAACTTT 16 V_LMAF_Q2_M01139 TRANSFAC - 103826582 103826590 6.0E-06 GGTCAGCAG 9 V_ISL2_01_M01328 TRANSFAC + 103824415 103824430 7.0E-06 CTCCACCACTTAATAC 16 V_IRF_Q6_01_M00972 TRANSFAC - 103824763 103824773 1.0E-05 AAAATAGAAAA 11 V_SRY_02_M00160 TRANSFAC - 103824768 103824779 1.0E-05 CTAAACAAAATA 12 V_STAT6_01_M00494 TRANSFAC + 103824727 103824734 7.0E-06 TATTTCCA 8 V_NERF_Q2_M00531 TRANSFAC - 103825469 103825486 7.0E-06 CGGCAGGAAGAAGGCGTC 18 V_NERF_Q2_M00531 TRANSFAC + 103826690 103826707 9.0E-06 GAGCAGGAAGTGGCACGC 18 V_NERF_Q2_M00531 TRANSFAC - 103829015 103829032 1.0E-06 GACCAGGAAGGGGCTGAG 18 V_GM497_04_M02864 TRANSFAC + 103825766 103825781 2.0E-06 GGCCGCACACACGTCC 16 V_CETS1P54_02_M00074 TRANSFAC - 103824822 103824834 2.0E-06 ATTCAGGAAATTT 13 V_HMGA2_01_M01300 TRANSFAC + 103824839 103824853 1.0E-05 AAATTGGGGTGAAAT 15 V_RPC155_01_M01798 TRANSFAC - 103824633 103824648 4.0E-06 CCAGGCGTTCGAGACC 16 V_ETS_Q4_M00771 TRANSFAC - 103826693 103826704 2.0E-06 TGCCACTTCCTG 12 V_HELIOSA_02_M01004 TRANSFAC + 103822733 103822743 4.0E-06 TTAAGGAAAAG 11 V_E4BP4_01_M00045 TRANSFAC + 103824448 103824459 3.0E-06 AGTTACGTAATC 12 V_E4BP4_01_M00045 TRANSFAC - 103824448 103824459 5.0E-06 GATTACGTAACT 12 V_CEBPD_Q6_M00621 TRANSFAC - 103824448 103824459 9.0E-06 GATTACGTAACT 12 V_GMEB1_03_M02761 TRANSFAC - 103824445 103824461 2.0E-06 GAGATTACGTAACTTAA 17 V_CEBPB_02_M00117 TRANSFAC - 103824447 103824460 7.0E-06 AGATTACGTAACTT 14 V_ELF5_01_M01197 TRANSFAC - 103824823 103824833 1.0E-05 TTCAGGAAATT 11 V_SPIB_01_M01204 TRANSFAC - 103829036 103829052 3.0E-06 AAGAAGAGGAACTCCTT 17 V_TEL2_Q6_M00678 TRANSFAC - 103826693 103826702 6.0E-06 CCACTTCCTG 10 V_GATA1_09_M02254 TRANSFAC - 103824476 103824486 0.0E+00 ACAGATAAGGA 11 V_RREB1_01_M00257 TRANSFAC - 103824327 103824340 1.0E-06 ACCCAAACCAAAAC 14 V_SOX17_04_M02904 TRANSFAC - 103824824 103824840 6.0E-06 TTACTCATTCAGGAAAT 17 V_NKX32_02_M01482 TRANSFAC + 103824415 103824431 7.0E-06 CTCCACCACTTAATACC 17 V_VBP_01_M00228 TRANSFAC + 103824449 103824458 1.0E-06 GTTACGTAAT 10 V_TAL1_01_M01591 TRANSFAC + 103824474 103824486 0.0E+00 CCTCCTTATCTGT 13 V_GATA1_04_M00128 TRANSFAC - 103824475 103824487 1.0E-06 TACAGATAAGGAG 13 V_FOXL1_02_M02857 TRANSFAC - 103824763 103824778 5.0E-06 TAAACAAAATAGAAAA 16 V_FOXL1_02_M02857 TRANSFAC - 103824768 103824783 8.0E-06 AGCCCTAAACAAAATA 16 V_FOXL1_04_M02753 TRANSFAC - 103824715 103824731 3.0E-06 AAATAGTAAACATGGCT 17 V_LUN1_01_M00480 TRANSFAC + 103825041 103825057 9.0E-06 GCCCAGCGACTGCGGGA 17 V_GFI1B_01_M01058 TRANSFAC - 103824359 103824370 7.0E-06 CAAATCACTTTA 12 V_TCF1_06_M02815 TRANSFAC - 103824438 103824454 3.0E-06 CGTAACTTAACTAAGAT 17 V_NRF2_Q4_M00821 TRANSFAC - 103824375 103824387 9.0E-06 CTCCAGAGTCAGT 13 V_OSR2_03_M02785 TRANSFAC - 103828955 103828970 2.0E-06 AAGAACAGTAGCTTGA 16 V_REST_02_M02256 TRANSFAC - 103829041 103829061 7.0E-06 TTCAAGACCAAGAAGAGGAAC 21 V_LMO2COM_02_M00278 TRANSFAC - 103824477 103824485 3.0E-06 CAGATAAGG 9 V_ETS1_B_M00339 TRANSFAC + 103826692 103826706 6.0E-06 GCAGGAAGTGGCACG 15 V_R_01_M00273 TRANSFAC + 103825635 103825655 1.0E-06 GAGGCCGCCTGGTGTGGTGCG 21 V_CREBP1_01_M00040 TRANSFAC + 103824450 103824457 7.0E-06 TTACGTAA 8 V_CREBP1_01_M00040 TRANSFAC - 103824450 103824457 7.0E-06 TTACGTAA 8 V_HLF_01_M00260 TRANSFAC + 103824449 103824458 0.0E+00 GTTACGTAAT 10 V_CTF1_01_M01196 TRANSFAC - 103828158 103828171 5.0E-06 TGGCATGGAGCCAG 14 V_CTF1_01_M01196 TRANSFAC + 103828159 103828172 3.0E-06 TGGCTCCATGCCAG 14 V_NFE2L2_01_M02263 TRANSFAC - 103829113 103829123 3.0E-06 ATGATTAAGCA 11 V_GATA5_03_M02756 TRANSFAC - 103824473 103824489 2.0E-06 TTTACAGATAAGGAGGA 17 V_AP2ALPHA_02_M01045 TRANSFAC - 103824991 103825005 1.0E-05 AGCGCCCCAGGGGCT 15 V_AP2ALPHA_02_M01045 TRANSFAC - 103825372 103825386 3.0E-06 ACCGCCCCAGGGGGT 15 V_CEBPE_01_M01772 TRANSFAC + 103824449 103824458 7.0E-06 GTTACGTAAT 10 V_CEBPE_01_M01772 TRANSFAC - 103824449 103824458 7.0E-06 ATTACGTAAC 10 V_TCF3_05_M02920 TRANSFAC - 103824769 103824783 8.0E-06 AGCCCTAAACAAAAT 15 TLX1_NFIC_MA0119.1 JASPAR - 103828158 103828171 5.0E-06 TGGCATGGAGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR + 103828159 103828172 3.0E-06 TGGCTCCATGCCAG 14 V_FEV_01_M02269 TRANSFAC - 103824824 103824831 1.0E-05 CAGGAAAT 8 V_AR_Q6_M00962 TRANSFAC - 103824809 103824817 6.0E-06 TGAGCACAT 9 V_FOXK1_03_M02752 TRANSFAC - 103824715 103824731 8.0E-06 AAATAGTAAACATGGCT 17 V_GATA1_06_M00347 TRANSFAC - 103824477 103824486 1.0E-05 ACAGATAAGG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.