Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OCEL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79629 occludin/ELL domain containing 1 chr19 + 17332054 - 17337554 17337054 Transcription Factor Binding Sites   Download all TFBS in the OCEL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU2F1_POU_DBD_dimeric_14_1 SELEX + 17336861 17336874 7.0E-06 TTTAAATTTGCAAA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 17337293 17337309 2.0E-06 CATTTACATAGCGCTTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 17336961 17336971 1.0E-05 GCCCCGCCCCC 11 POU3F3_POU_DBD_monomeric_12_1 SELEX + 17336848 17336859 6.0E-06 AAAAATAAATAA 12 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 17336852 17336868 1.0E-05 ATAAATAAGTTTAAATT 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 17336849 17336860 5.0E-06 AAAATAAATAAG 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 17336847 17336859 1.0E-06 AAAAAATAAATAA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 17337294 17337302 3.0E-06 TATGTAAAT 9 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 17337369 17337377 2.0E-06 TATGCAAAT 9 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 17336849 17336859 3.0E-06 AAAATAAATAA 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 17337294 17337302 4.0E-06 TATGTAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 17337369 17337377 2.0E-06 TATGCAAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 17337291 17337304 7.0E-06 GCTATGTAAATGAA 14 POU2F2_POU_DBD_monomeric_11_1 SELEX + 17337368 17337378 5.0E-06 CTATGCAAATA 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 17337294 17337302 4.0E-06 TATGTAAAT 9 POU3F4_POU_DBD_monomeric_9_1 SELEX + 17337369 17337377 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 17337294 17337302 5.0E-06 TATGTAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 17337369 17337377 2.0E-06 TATGCAAAT 9 Pax4_MA0068.1 JASPAR + 17332276 17332305 8.0E-06 AAAAAAAAAAAAAAAAAAAGATCATAAGAA 30 Klf4_MA0039.2 JASPAR - 17336942 17336951 1.0E-05 TGGGCGTGGC 10 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 17336853 17336868 9.0E-06 TAAATAAGTTTAAATT 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 17336853 17336868 1.0E-05 TAAATAAGTTTAAATT 16 POU3F3_POU_DBD_monomeric_13_1 SELEX - 17336864 17336876 7.0E-06 GTTTTGCAAATTT 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 17336848 17336858 2.0E-06 AAAAATAAATA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 17336845 17336858 3.0E-06 GAAAAAAATAAATA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 17336861 17336874 4.0E-06 TTTAAATTTGCAAA 14 SP1_MA0079.2 JASPAR + 17336962 17336971 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 17337003 17337012 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 17339887 17339896 9.0E-06 CCCCTCCTCC 10 ONECUT2_CUT_DBD_monomeric_14_1 SELEX + 17336847 17336860 8.0E-06 AAAAAATAAATAAG 14 FOXI1_MA0042.1 JASPAR - 17336850 17336861 2.0E-06 ACTTATTTATTT 12 SP4_C2H2_full_monomeric_17_1 SELEX + 17336958 17336974 8.0E-06 TCAGCCCCGCCCCCAGG 17 SP4_C2H2_full_monomeric_17_1 SELEX + 17336999 17337015 5.0E-06 CAGACCCCGCCCCCAGC 17 SP4_C2H2_full_monomeric_17_1 SELEX - 17337323 17337339 9.0E-06 CAGACCCCGCCCACGAC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 17337002 17337012 4.0E-06 ACCCCGCCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 17337326 17337336 3.0E-06 ACCCCGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 17336848 17336858 1.0E-06 AAAAATAAATA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX - 17337292 17337303 9.0E-06 CTATGTAAATGA 12 Foxd3_MA0041.1 JASPAR - 17336846 17336857 2.0E-06 ATTTATTTTTTT 12 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 17336941 17336955 4.0E-06 GGCCACGCCCAGCCA 15 POU3F1_POU_DBD_monomeric_12_2 SELEX + 17336848 17336859 8.0E-06 AAAAATAAATAA 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 17337367 17337378 5.0E-06 TCTATGCAAATA 12 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 17337757 17337767 5.0E-06 TTTCCCGACAC 11 ETS1_ETS_full_dimeric_18_1 SELEX + 17339895 17339912 5.0E-06 CCAGGAAGGCCTTCCAGG 18 POU3F2_POU_DBD_monomeric_12_1 SELEX - 17337292 17337303 7.0E-06 CTATGTAAATGA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 17336846 17336858 0.0E+00 AAAAAAATAAATA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 17336852 17336865 6.0E-06 TTAAACTTATTTAT 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 17336846 17336858 4.0E-06 AAAAAAATAAATA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 17336849 17336859 7.0E-06 AAAATAAATAA 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 17336847 17336860 2.0E-06 AAAAAATAAATAAG 14 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 17336834 17336844 7.0E-06 AGCAATTATAT 11 Zfx_MA0146.1 JASPAR - 17336979 17336992 7.0E-06 GGGGGCTGGGCCTG 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 17336852 17336865 4.0E-06 ATAAATAAGTTTAA 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 17336845 17336858 4.0E-06 GAAAAAAATAAATA 14 V_FOXP1_01_M00987 TRANSFAC - 17336836 17336855 4.0E-06 TTATTTTTTTCAGCAATTAT 20 V_FOXP1_01_M00987 TRANSFAC - 17336840 17336859 2.0E-06 TTATTTATTTTTTTCAGCAA 20 V_TST1_02_M01316 TRANSFAC + 17336846 17336862 9.0E-06 AAAAAAATAAATAAGTT 17 V_DBX1_01_M01483 TRANSFAC + 17336846 17336862 4.0E-06 AAAAAAATAAATAAGTT 17 V_FREAC7_01_M00293 TRANSFAC + 17336847 17336862 0.0E+00 AAAAAATAAATAAGTT 16 V_FOXP3_Q4_M00992 TRANSFAC + 17336821 17336837 0.0E+00 AAAAATTTTTTTCATAT 17 V_ATF_01_M00017 TRANSFAC - 17337277 17337290 6.0E-06 CTCTGACGTCGCCG 14 V_BACH2_01_M00490 TRANSFAC - 17332322 17332332 2.0E-06 CGTGAGTCACC 11 V_XFD1_01_M00267 TRANSFAC + 17336849 17336862 3.0E-06 AAAATAAATAAGTT 14 V_FOXA2_04_M02749 TRANSFAC + 17336847 17336863 2.0E-06 AAAAAATAAATAAGTTT 17 V_CEBP_Q3_M00770 TRANSFAC + 17336863 17336874 5.0E-06 TAAATTTGCAAA 12 V_CEBP_Q3_M00770 TRANSFAC - 17336867 17336878 7.0E-06 TGGTTTTGCAAA 12 V_PAX4_03_M00378 TRANSFAC - 17337408 17337419 7.0E-06 AACTCTCACCCC 12 V_DLX3_01_M01400 TRANSFAC + 17336831 17336847 9.0E-06 TTCATATAATTGCTGAA 17 V_HMGIY_Q3_M01010 TRANSFAC - 17336844 17336858 3.0E-06 TATTTATTTTTTTCA 15 V_EVI1_04_M00081 TRANSFAC + 17336844 17336858 2.0E-06 TGAAAAAAATAAATA 15 V_EVI1_04_M00081 TRANSFAC + 17336854 17336868 2.0E-06 AAATAAGTTTAAATT 15 V_FOXD3_01_M00130 TRANSFAC - 17336846 17336857 1.0E-06 ATTTATTTTTTT 12 V_FOXD3_01_M00130 TRANSFAC - 17336850 17336861 8.0E-06 ACTTATTTATTT 12 V_MAFB_05_M02775 TRANSFAC + 17336836 17336852 5.0E-06 ATAATTGCTGAAAAAAA 17 V_IK_Q5_M01169 TRANSFAC + 17336448 17336457 3.0E-06 TTTGGGAGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 17336961 17336970 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 17337002 17337011 7.0E-06 GGGGCGGGGT 10 V_OCT1_Q5_01_M00930 TRANSFAC + 17337292 17337302 2.0E-06 TCATTTACATA 11 V_OCT1_Q5_01_M00930 TRANSFAC - 17337369 17337379 8.0E-06 CTATTTGCATA 11 V_OCT1_01_M00135 TRANSFAC + 17337364 17337382 9.0E-06 GCGTCTATGCAAATAGCGG 19 V_POU2F3_01_M01476 TRANSFAC - 17337290 17337305 9.0E-06 CGCTATGTAAATGAAC 16 V_POU2F3_01_M01476 TRANSFAC + 17337366 17337381 9.0E-06 GTCTATGCAAATAGCG 16 V_FOXO3A_Q1_M01137 TRANSFAC + 17336847 17336858 4.0E-06 AAAAAATAAATA 12 V_FOXO3A_Q1_M01137 TRANSFAC + 17336851 17336862 2.0E-06 AATAAATAAGTT 12 V_AP2_Q6_01_M00915 TRANSFAC + 17336964 17336976 0.0E+00 CCGCCCCCAGGCC 13 V_HNF3_Q6_01_M01012 TRANSFAC - 17336846 17336863 1.0E-06 AAACTTATTTATTTTTTT 18 V_SP1_03_M02281 TRANSFAC + 17336962 17336971 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 17337003 17337012 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 17339887 17339896 9.0E-06 CCCCTCCTCC 10 V_GKLF_02_M01588 TRANSFAC + 17336942 17336953 1.0E-06 GCCACGCCCAGC 12 V_SP1_02_M01303 TRANSFAC - 17337001 17337011 8.0E-06 GGGGCGGGGTC 11 V_E2A_Q2_M00804 TRANSFAC - 17337116 17337129 7.0E-06 TCACCTGTCCCAGC 14 V_LYF1_01_M00141 TRANSFAC + 17336448 17336456 9.0E-06 TTTGGGAGG 9 V_TCFAP2E_04_M02926 TRANSFAC - 17336824 17336837 7.0E-06 ATATGAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 17336825 17336838 1.0E-06 TATATGAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC + 17336841 17336854 0.0E+00 TGCTGAAAAAAATA 14 V_ELF4_04_M02850 TRANSFAC + 17336842 17336858 1.0E-06 GCTGAAAAAAATAAATA 17 V_ELF4_04_M02850 TRANSFAC + 17336843 17336859 5.0E-06 CTGAAAAAAATAAATAA 17 V_BACH1_01_M00495 TRANSFAC - 17332320 17332334 9.0E-06 GGCGTGAGTCACCAT 15 V_GC_01_M00255 TRANSFAC - 17336959 17336972 0.0E+00 TGGGGGCGGGGCTG 14 V_GC_01_M00255 TRANSFAC - 17337000 17337013 2.0E-06 TGGGGGCGGGGTCT 14 V_GC_01_M00255 TRANSFAC - 17339884 17339897 7.0E-06 TGGAGGAGGGGCTG 14 V_MECP2_01_M01298 TRANSFAC - 17337055 17337069 5.0E-06 CCGGGTTGTGCATTT 15 V_POU3F2_01_M00463 TRANSFAC - 17336852 17336865 6.0E-06 TTAAACTTATTTAT 14 V_ZFP105_03_M02827 TRANSFAC + 17336844 17336858 9.0E-06 TGAAAAAAATAAATA 15 V_KROX_Q6_M00982 TRANSFAC + 17337004 17337017 1.0E-05 CCCGCCCCCAGCCC 14 V_PXRRXR_02_M01153 TRANSFAC + 17337287 17337294 1.0E-05 AGAGTTCA 8 V_SP1_Q6_M00196 TRANSFAC - 17336960 17336972 1.0E-06 TGGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 17337001 17337013 2.0E-06 TGGGGGCGGGGTC 13 V_HNF3_Q6_M00791 TRANSFAC + 17336848 17336860 3.0E-06 AAAAATAAATAAG 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 17336848 17336858 1.0E-06 TATTTATTTTT 11 V_HNF1_Q6_01_M01011 TRANSFAC + 17336841 17336861 6.0E-06 TGCTGAAAAAAATAAATAAGT 21 V_HNF1_Q6_01_M01011 TRANSFAC + 17336844 17336864 5.0E-06 TGAAAAAAATAAATAAGTTTA 21 V_JUNDM2_04_M02876 TRANSFAC - 17332320 17332335 9.0E-06 AGGCGTGAGTCACCAT 16 V_OCT1_04_M00138 TRANSFAC - 17336821 17336843 2.0E-06 GCAATTATATGAAAAAAATTTTT 23 V_OCT1_04_M00138 TRANSFAC - 17336859 17336881 3.0E-06 GGATGGTTTTGCAAATTTAAACT 23 V_KLF7_03_M02773 TRANSFAC + 17336958 17336973 4.0E-06 TCAGCCCCGCCCCCAG 16 V_KLF7_03_M02773 TRANSFAC + 17336999 17337014 9.0E-06 CAGACCCCGCCCCCAG 16 V_XFD2_01_M00268 TRANSFAC + 17336849 17336862 6.0E-06 AAAATAAATAAGTT 14 V_PNR_01_M01650 TRANSFAC + 17337281 17337294 4.0E-06 GACGTCAGAGTTCA 14 V_NCX_02_M01420 TRANSFAC + 17336846 17336862 3.0E-06 AAAAAAATAAATAAGTT 17 V_AP1_01_M00517 TRANSFAC - 17332321 17332333 8.0E-06 GCGTGAGTCACCA 13 V_SP1_01_M00008 TRANSFAC - 17337002 17337011 3.0E-06 GGGGCGGGGT 10 V_OCT1_B_M00342 TRANSFAC + 17337369 17337378 0.0E+00 TATGCAAATA 10 V_ISGF4G_04_M02875 TRANSFAC + 17336845 17336858 6.0E-06 GAAAAAAATAAATA 14 V_OCT_Q6_M00795 TRANSFAC + 17337292 17337302 1.0E-06 TCATTTACATA 11 V_OCT_Q6_M00795 TRANSFAC - 17337369 17337379 3.0E-06 CTATTTGCATA 11 V_SOX17_04_M02904 TRANSFAC + 17336824 17336840 5.0E-06 AATTTTTTTCATATAAT 17 V_SP4_Q5_M01273 TRANSFAC + 17336961 17336971 1.0E-06 GCCCCGCCCCC 11 V_MTF1_06_M02882 TRANSFAC - 17336826 17336839 0.0E+00 TTATATGAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 17336847 17336860 3.0E-06 AAAAAATAAATAAG 14 V_POU5F1_01_M01307 TRANSFAC + 17337369 17337378 2.0E-06 TATGCAAATA 10 V_CEBPA_01_M00116 TRANSFAC + 17336865 17336878 5.0E-06 AATTTGCAAAACCA 14 V_OCT2_01_M01368 TRANSFAC - 17337290 17337305 5.0E-06 CGCTATGTAAATGAAC 16 V_OCT2_01_M01368 TRANSFAC + 17337366 17337381 8.0E-06 GTCTATGCAAATAGCG 16 V_OCT1_Q6_M00195 TRANSFAC + 17337366 17337380 4.0E-06 GTCTATGCAAATAGC 15 V_FOXL1_04_M02753 TRANSFAC + 17336847 17336863 1.0E-06 AAAAAATAAATAAGTTT 17 V_PLZF_02_M01075 TRANSFAC - 17336848 17336876 3.0E-06 GTTTTGCAAATTTAAACTTATTTATTTTT 29 V_ZFP281_01_M01597 TRANSFAC - 17336962 17336972 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 17337003 17337013 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 17339887 17339897 7.0E-06 TGGAGGAGGGG 11 V_SRF_06_M02916 TRANSFAC - 17336821 17336837 6.0E-06 ATATGAAAAAAATTTTT 17 V_SRF_06_M02916 TRANSFAC + 17336842 17336858 1.0E-06 GCTGAAAAAAATAAATA 17 V_SRF_06_M02916 TRANSFAC + 17336843 17336859 1.0E-06 CTGAAAAAAATAAATAA 17 V_HFH3_01_M00289 TRANSFAC - 17336849 17336861 2.0E-06 ACTTATTTATTTT 13 V_FOXJ2_01_M00422 TRANSFAC + 17336846 17336863 1.0E-06 AAAAAAATAAATAAGTTT 18 V_HNF3B_Q6_M02014 TRANSFAC - 17336851 17336859 1.0E-05 TTATTTATT 9 V_SP1_Q2_01_M00933 TRANSFAC + 17336962 17336971 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 17337003 17337012 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 17336960 17336972 2.0E-06 TGGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 17337001 17337013 5.0E-06 TGGGGGCGGGGTC 13 V_FOXK1_03_M02752 TRANSFAC + 17336847 17336863 7.0E-06 AAAAAATAAATAAGTTT 17 V_NR2F2_04_M02887 TRANSFAC - 17337123 17337138 9.0E-06 CGCCCCGGGTCACCTG 16 V_PAX4_04_M00380 TRANSFAC + 17332277 17332306 9.0E-06 AAAAAAAAAAAAAAAAAAGATCATAAGAAG 30 V_CEBPA_Q6_M01866 TRANSFAC + 17336863 17336875 9.0E-06 TAAATTTGCAAAA 13 V_CEBPA_Q6_M01866 TRANSFAC - 17336866 17336878 1.0E-06 TGGTTTTGCAAAT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.