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IRX3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 79191 iroquois homeobox 3 chr16 - 54319878 - 54325378 54320378 Irx3_homeodomain_DBD_dimeric_12_1 V_IRX3_01_M01318 V_IRX3_02_M01485 Transcription Factor Binding Sites   Download all TFBS in the IRX3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 54316353 54316371 3.0E-06 TGTCCTGTAGAGGGAGCTC 19 NF-kappaB_MA0061.1 JASPAR - 54318476 54318485 6.0E-06 GGGACTTCCC 10 SPIC_ETS_full_monomeric_14_1 SELEX - 54318023 54318036 5.0E-06 TAAAAGGGGACGAA 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 54318920 54318931 4.0E-06 TCCAAAAATAGC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 54321291 54321302 7.0E-06 ACTAAAAATGGC 12 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 54316515 54316526 1.0E-06 GGTTTTCCCACG 12 TBX1_TBX_DBD_dimeric_23_1 SELEX + 54317137 54317159 9.0E-06 CTTCAAACAACCGAGGGGAGAAA 23 EWSR1-FLI1_MA0149.1 JASPAR - 54320531 54320548 7.0E-06 GGAAGAAGTGAAGGGAAC 18 EWSR1-FLI1_MA0149.1 JASPAR - 54323541 54323558 5.0E-06 GGAGGGAAGGATAGAAGA 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 54318920 54318931 5.0E-06 TCCAAAAATAGC 12 IRF7_IRF_DBD_trimeric_17_1 SELEX - 54324599 54324615 1.0E-06 CAAAAGAAAATCGTTCC 17 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 54321251 54321259 5.0E-06 GCCACTTAA 9 E2F7_E2F_DBD_dimeric_14_1 SELEX + 54317123 54317136 1.0E-06 CTTTCCCGCGAATT 14 MEF2B_MADS_full_dimeric_12_1 SELEX - 54318920 54318931 4.0E-06 TCCAAAAATAGC 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 54321291 54321302 7.0E-06 ACTAAAAATGGC 12 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 54321251 54321259 8.0E-06 GCCACTTAA 9 E2F8_E2F_DBD_dimeric_12_1 SELEX + 54317124 54317135 1.0E-06 TTTCCCGCGAAT 12 MEF2A_MA0052.1 JASPAR - 54316680 54316689 9.0E-06 CTCTTTATAG 10 MEF2A_MA0052.1 JASPAR + 54318921 54318930 8.0E-06 CTATTTTTGG 10 YY2_C2H2_full_monomeric_11_1 SELEX - 54321295 54321305 1.0E-06 CCCGCCATTTT 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 54317311 54317325 9.0E-06 TACACACACACAAAG 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 54320491 54320505 3.0E-06 AGAAAGGGAAAGAGA 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 54322151 54322165 1.0E-06 AACAAGGGAAAGTTT 15 Nkx3-2_MA0122.1 JASPAR - 54321251 54321259 8.0E-06 TTAAGTGGC 9 GCM1_GCM_full_monomeric_11_1 SELEX + 54319432 54319442 8.0E-06 CATACGGGTAG 11 REST_MA0138.2 JASPAR - 54319376 54319396 9.0E-06 AACGCCACCAGGGAGAGCACC 21 PLAG1_MA0163.1 JASPAR + 54321315 54321328 9.0E-06 GGGGCTGAAGGGTG 14 Sox2_MA0143.1 JASPAR + 54316349 54316363 1.0E-06 CCTTTGTCCTGTAGA 15 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 54321331 54321342 8.0E-06 TGCCCCCGGGCT 12 Zfx_MA0146.1 JASPAR - 54318947 54318960 3.0E-06 GCGACCTAGGCCTG 14 Zfx_MA0146.1 JASPAR + 54321763 54321776 7.0E-06 GCCGGCCAGGCCTG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 54323696 54323709 4.0E-06 GAAAACAAAACAAA 14 V_FOXP1_01_M00987 TRANSFAC - 54317362 54317381 3.0E-06 TTGTTTGTCCGGTTGATTTT 20 V_NFKB_C_M00208 TRANSFAC - 54318475 54318486 9.0E-06 TGGGACTTCCCG 12 V_TCF3_01_M01594 TRANSFAC + 54323699 54323711 9.0E-06 GTTTTGTTTTCCT 13 V_HSF1_Q6_M01023 TRANSFAC + 54317124 54317140 4.0E-06 TTTCCCGCGAATTCTTC 17 V_ATF5_01_M01295 TRANSFAC + 54320541 54320551 1.0E-06 CTTCTTCCTTT 11 V_E2F1_Q3_01_M00938 TRANSFAC + 54324342 54324357 0.0E+00 TTGGCGCGGAAGAGGC 16 V_SMAD3_Q6_01_M01888 TRANSFAC - 54320687 54320699 7.0E-06 AGACAGACACCGA 13 V_SMAD3_Q6_01_M01888 TRANSFAC - 54320691 54320703 2.0E-06 GGACAGACAGACA 13 V_PAX4_03_M00378 TRANSFAC + 54317348 54317359 7.0E-06 AAACTCCACCCC 12 V_BCL6_01_M01183 TRANSFAC + 54320563 54320578 7.0E-06 TATTTTGTAAATCTCT 16 V_FOXO4_02_M00476 TRANSFAC + 54323699 54323712 3.0E-06 GTTTTGTTTTCCTG 14 V_SP1_Q6_01_M00931 TRANSFAC + 54320859 54320868 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 54320864 54320873 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC - 54318916 54318937 2.0E-06 TCGGACTCCAAAAATAGCGACT 22 V_IRF_Q6_01_M00972 TRANSFAC - 54320494 54320504 9.0E-06 GAAAGGGAAAG 11 V_SRY_02_M00160 TRANSFAC - 54323698 54323709 3.0E-06 GAAAACAAAACA 12 V_IRF2_Q6_M01882 TRANSFAC - 54320491 54320506 1.0E-06 GAGAAAGGGAAAGAGA 16 V_NFAT3_Q3_M01734 TRANSFAC - 54316274 54316283 6.0E-06 TCTTTTTCCT 10 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 54323710 54323722 3.0E-06 CAGAACTTTGCAG 13 V_EAR2_Q2_M01728 TRANSFAC + 54316346 54316359 5.0E-06 TCCCCTTTGTCCTG 14 V_AP2_Q6_01_M00915 TRANSFAC + 54321005 54321017 1.0E-05 CTGTCCCCAGGCT 13 V_AP2_Q6_01_M00915 TRANSFAC + 54321384 54321396 9.0E-06 CGCGCCCCAGGCG 13 V_MAF_Q6_M00648 TRANSFAC - 54324328 54324343 4.0E-06 AAGAGCGAAGTTGGCA 16 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 54316516 54316527 2.0E-06 GGGTTTTCCCAC 12 V_AP2_Q6_M00189 TRANSFAC - 54320023 54320034 6.0E-06 AGCCCGCGGGCG 12 V_AP4_Q6_02_M01860 TRANSFAC + 54319695 54319707 2.0E-06 CCAGCTGCGGGAA 13 V_COUPTF_Q6_M01036 TRANSFAC - 54316308 54316330 2.0E-06 CTCCGTGGCCTCTACACCCGGCC 23 V_PU1_Q4_M01172 TRANSFAC + 54320533 54320551 0.0E+00 TCCCTTCACTTCTTCCTTT 19 V_AP4_Q6_01_M00927 TRANSFAC + 54319694 54319702 6.0E-06 ACCAGCTGC 9 V_LDSPOLYA_B_M00317 TRANSFAC + 54320691 54320706 6.0E-06 TGTCTGTCTGTCCATC 16 V_TAL1_GATA1_01_M02243 TRANSFAC + 54323710 54323727 1.0E-06 CTGCAAAGTTCTGATAAG 18 V_EGR1_01_M00243 TRANSFAC - 54316462 54316473 7.0E-06 TTGCGGGGGTGT 12 V_FKLF_Q5_M01837 TRANSFAC - 54316405 54316414 5.0E-06 GGGGTGGGCG 10 V_FKLF_Q5_M01837 TRANSFAC - 54320833 54320842 5.0E-06 GGGGTGGGCG 10 V_FOXO1_02_M00474 TRANSFAC + 54323699 54323712 9.0E-06 GTTTTGTTTTCCTG 14 V_NGFIC_01_M00244 TRANSFAC - 54316462 54316473 1.0E-05 TTGCGGGGGTGT 12 V_NKX31_02_M02782 TRANSFAC + 54321247 54321263 0.0E+00 ATTAGCCACTTAACGCC 17 V_NKX26_01_M01322 TRANSFAC + 54321248 54321263 2.0E-06 TTAGCCACTTAACGCC 16 V_PAX9_B_M00329 TRANSFAC - 54324514 54324537 4.0E-06 GAGACGCAGGGAAGTGAGACGGGT 24 V_SP4_03_M02810 TRANSFAC + 54320903 54320919 6.0E-06 CTGCCCGCCCCCTCCTG 17 V_KROX_Q6_M00982 TRANSFAC + 54318373 54318386 0.0E+00 CCCGCCCCCGCTCC 14 V_KROX_Q6_M00982 TRANSFAC - 54318768 54318781 9.0E-06 CCAGCCCCCGCCTC 14 V_ZBP89_Q4_M01816 TRANSFAC + 54319083 54319092 6.0E-06 TCCTCCCCCC 10 V_SP1_Q6_M00196 TRANSFAC + 54320857 54320869 7.0E-06 GCGGGGCGGGGCG 13 V_IRF3_Q3_M01279 TRANSFAC + 54320491 54320503 1.0E-06 TCTCTTTCCCTTT 13 V_IRF3_Q3_M01279 TRANSFAC + 54324607 54324619 1.0E-06 TTTCTTTTGCTTT 13 V_MAZ_Q6_01_M02023 TRANSFAC - 54320309 54320322 7.0E-06 TGGGGAGAGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 54320384 54320397 7.0E-06 AGGGGAGGGGAGAG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 54321143 54321156 6.0E-06 GGGGGTGGGGAGCG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 54323548 54323561 2.0E-06 CTGGGAGGGAAGGA 14 V_EGR1_Q6_M01873 TRANSFAC - 54318374 54318383 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC + 54320490 54320504 3.0E-06 TTCTCTTTCCCTTTC 15 V_PAX5_01_M00143 TRANSFAC - 54324512 54324539 2.0E-06 CAGAGACGCAGGGAAGTGAGACGGGTCG 28 V_SREBP_Q6_M01168 TRANSFAC + 54316404 54316418 5.0E-06 CCGCCCACCCCAGGC 15 V_YY1_Q6_02_M01035 TRANSFAC - 54321295 54321305 1.0E-06 CCCGCCATTTT 11 V_REST_01_M01256 TRANSFAC + 54319372 54319393 6.0E-06 TGCTGGTGCTCTCCCTGGTGGC 22 V_REX1_03_M01744 TRANSFAC + 54321295 54321306 3.0E-06 AAAATGGCGGGC 12 Tal1_Gata1_MA0140.1 JASPAR + 54323710 54323727 1.0E-06 CTGCAAAGTTCTGATAAG 18 V_HBP1_03_M02762 TRANSFAC - 54315567 54315582 6.0E-06 ACATTGAATGACTTTA 16 V_SP1SP3_Q4_M01219 TRANSFAC + 54320907 54320917 1.0E-06 CCGCCCCCTCC 11 V_PBX1_05_M01967 TRANSFAC + 54320208 54320221 1.0E-05 TCTGATTGACATTT 14 V_SRF_Q5_02_M01007 TRANSFAC + 54315557 54315575 1.0E-05 GCTCTCCTTGTAAAGTCAT 19 V_SMAD4_Q6_M00733 TRANSFAC - 54316253 54316267 3.0E-06 GTCAGCCAGCCAACC 15 V_SP3_Q3_M00665 TRANSFAC + 54319746 54319759 5.0E-06 AGCCTTGGGCGGCG 14 V_HIC1_02_M01072 TRANSFAC - 54316693 54316707 3.0E-06 CCCGGTTGCCCCCCT 15 V_CTCF_02_M01259 TRANSFAC + 54316350 54316369 5.0E-06 CTTTGTCCTGTAGAGGGAGC 20 V_OCT4_02_M01124 TRANSFAC - 54316229 54316243 5.0E-06 TTTGACTTGAAGAAG 15 V_CTCF_01_M01200 TRANSFAC + 54316352 54316371 5.0E-06 TTGTCCTGTAGAGGGAGCTC 20 V_ISGF4G_04_M02875 TRANSFAC - 54323697 54323710 3.0E-06 GGAAAACAAAACAA 14 V_FOXO1_Q5_M01216 TRANSFAC - 54323696 54323704 8.0E-06 CAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC - 54323701 54323709 5.0E-06 GAAAACAAA 9 V_NKX32_02_M01482 TRANSFAC + 54321247 54321263 1.0E-06 ATTAGCCACTTAACGCC 17 V_KAISO_01_M01119 TRANSFAC - 54316490 54316499 2.0E-06 ATCCTGCTAA 10 V_SP4_Q5_M01273 TRANSFAC - 54320858 54320868 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 54320863 54320873 2.0E-06 GCCCCGCCCCG 11 V_PTF1BETA_Q6_M00657 TRANSFAC + 54316519 54316532 1.0E-05 GGAAAACCCACCAG 14 V_GATA2_01_M00076 TRANSFAC - 54318904 54318913 6.0E-06 GAAGATAGCT 10 V_FAC1_01_M00456 TRANSFAC - 54323694 54323707 2.0E-06 AAACAAAACAAATG 14 V_FAC1_01_M00456 TRANSFAC - 54323696 54323709 4.0E-06 GAAAACAAAACAAA 14 V_TAL1_01_M01591 TRANSFAC + 54320475 54320487 9.0E-06 CTTTCTCCTCTCC 13 V_SMAD4_04_M02898 TRANSFAC - 54320177 54320193 6.0E-06 GAATCTCCGCCAATCTG 17 V_EOMES_04_M02851 TRANSFAC + 54317750 54317765 8.0E-06 AGGAAGGTGTCGCAAT 16 V_CNOT3_01_M01253 TRANSFAC + 54319004 54319013 4.0E-06 GGCCGCGCCG 10 V_CAAT_C_M00200 TRANSFAC - 54322161 54322185 9.0E-06 CCCAAAACCTGGTCCTCCCCAAACT 25 V_FOXL1_02_M02857 TRANSFAC - 54323693 54323708 0.0E+00 AAAACAAAACAAATGA 16 V_FOXL1_02_M02857 TRANSFAC - 54324604 54324619 7.0E-06 AAAGCAAAAGAAAATC 16 V_OCT1_Q6_M00195 TRANSFAC - 54320209 54320223 8.0E-06 AGAAATGTCAATCAG 15 V_FOXJ3_06_M02855 TRANSFAC - 54323693 54323709 0.0E+00 GAAAACAAAACAAATGA 17 V_PLAG1_01_M01778 TRANSFAC + 54321337 54321352 3.0E-06 GGGGCACTGGAAGGGT 16 V_PITX1_01_M01484 TRANSFAC - 54320566 54320582 1.0E-05 AGAGAGAGATTTACAAA 17 V_FPM315_01_M01587 TRANSFAC - 54319077 54319088 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 54319080 54319091 0.0E+00 GGGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 54319098 54319109 3.0E-06 GGAGGAGGAGGA 12 V_TBX15_02_M01264 TRANSFAC + 54315537 54315554 2.0E-06 AGCTGTTGAGGTGTCGGA 18 V_REST_02_M02256 TRANSFAC - 54319376 54319396 9.0E-06 AACGCCACCAGGGAGAGCACC 21 V_ZFP281_01_M01597 TRANSFAC + 54321142 54321152 1.0E-06 TGGGGGTGGGG 11 V_EGR1_06_M02744 TRANSFAC + 54318373 54318386 4.0E-06 CCCGCCCCCGCTCC 14 V_IRF1_Q6_01_M01881 TRANSFAC + 54320492 54320505 8.0E-06 CTCTTTCCCTTTCT 14 V_NFKAPPAB_01_M00054 TRANSFAC - 54318476 54318485 7.0E-06 GGGACTTCCC 10 V_MYF6_03_M02781 TRANSFAC - 54318402 54318417 3.0E-06 GCGGAACAGGTGACTG 16 V_SOX2_01_M02246 TRANSFAC + 54316349 54316363 1.0E-06 CCTTTGTCCTGTAGA 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 54320531 54320548 7.0E-06 GGAAGAAGTGAAGGGAAC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 54323541 54323558 5.0E-06 GGAGGGAAGGATAGAAGA 18 V_VDR_Q3_M00444 TRANSFAC - 54316183 54316197 8.0E-06 GGGGTAAGAAGGAGA 15 V_NMYC_01_M00055 TRANSFAC - 54316510 54316521 5.0E-06 TCCCACGTGCCC 12 V_SMAD3_Q6_M00701 TRANSFAC - 54317324 54317332 1.0E-05 TGTCTGCCT 9 V_SMAD3_Q6_M00701 TRANSFAC + 54320691 54320699 3.0E-06 TGTCTGTCT 9 V_SOX15_04_M02903 TRANSFAC - 54315565 54315579 6.0E-06 TTGAATGACTTTACA 15 V_UF1H3BETA_Q6_M01068 TRANSFAC + 54320866 54320879 2.0E-06 GGCGGGGCAGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 54321140 54321153 5.0E-06 CGTGGGGGTGGGGA 14 V_P300_01_M00033 TRANSFAC - 54316213 54316226 9.0E-06 GTAGGGAGTGTTTG 14 V_PAX4_04_M00380 TRANSFAC + 54317362 54317391 5.0E-06 AAAATCAACCGGACAAACAAACCTCACAGC 30 V_DMRT5_01_M01150 TRANSFAC + 54318185 54318199 8.0E-06 TTGAGTAACTTTTTC 15 V_PPARA_01_M00242 TRANSFAC + 54320635 54320654 5.0E-06 GTAAGGCAGCCAAAAGTTGT 20 V_AP2_Q3_M00800 TRANSFAC + 54321007 54321022 1.0E-06 GTCCCCAGGCTGAGGC 16 V_NANOG_02_M01247 TRANSFAC - 54323694 54323713 4.0E-06 GCAGGAAAACAAAACAAATG 20

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