Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SUMO1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7341 small ubiquitin-like modifier 1 chr2 - 203102822 - 203108322 203103322 Transcription Factor Binding Sites   Download all TFBS in the SUMO1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 203103653 203103666 9.0E-06 ATAAACATATTTGG 14 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX - 203103422 203103433 5.0E-06 CGCGACCACCGG 12 ZNF713_C2H2_full_monomeric_17_1 SELEX + 203103750 203103766 8.0E-06 AACAAGAAAGCAACGAC 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 203103658 203103669 9.0E-06 CAAATAAACATA 12 TEF_bZIP_DBD_dimeric_12_1 SELEX + 203102753 203102764 3.0E-06 CGTTACATAACT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 203103659 203103671 4.0E-06 TTCAAATAAACAT 13 HLF_bZIP_full_dimeric_12_1 SELEX + 203102753 203102764 2.0E-06 CGTTACATAACT 12 POU1F1_POU_DBD_monomeric_14_1 SELEX + 203103656 203103669 6.0E-06 AATATGTTTATTTG 14 NFIL3_MA0025.1 JASPAR - 203102752 203102762 4.0E-06 TTATGTAACGG 11 DBP_bZIP_full_dimeric_12_1 SELEX + 203102753 203102764 7.0E-06 CGTTACATAACT 12 DBP_bZIP_full_dimeric_12_1 SELEX - 203102753 203102764 5.0E-06 AGTTATGTAACG 12 NR2F1_MA0017.1 JASPAR - 203103504 203103517 5.0E-06 GGACCTTTGCTCCT 14 POU3F3_POU_DBD_monomeric_13_1 SELEX + 203103656 203103668 1.0E-06 AATATGTTTATTT 13 Foxq1_MA0040.1 JASPAR + 203103657 203103667 9.0E-06 ATATGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 203103660 203103670 8.0E-06 TCAAATAAACA 11 SP1_MA0079.2 JASPAR + 203103044 203103053 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 203103064 203103073 3.0E-06 CCCCTCCCCC 10 FOXI1_MA0042.1 JASPAR + 203103657 203103668 1.0E-06 ATATGTTTATTT 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 203103660 203103670 3.0E-06 TCAAATAAACA 11 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 203102753 203102764 3.0E-06 CGTTACATAACT 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 203103657 203103668 6.0E-06 ATATGTTTATTT 12 Foxd3_MA0041.1 JASPAR + 203103657 203103668 0.0E+00 ATATGTTTATTT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 203103656 203103667 8.0E-06 AATATGTTTATT 12 ETV6_ETS_full_monomeric_10_1 SELEX - 203103293 203103302 6.0E-06 AGCGGAAGTT 10 ETV6_ETS_full_monomeric_10_1 SELEX - 203103314 203103323 1.0E-06 AGCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX - 203103314 203103328 2.0E-06 CGCGAAGCGGAAGTG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 203103660 203103672 2.0E-06 ATTCAAATAAACA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 203103653 203103666 8.0E-06 ATAAACATATTTGG 14 TBX1_TBX_DBD_dimeric_20_1 SELEX + 203103811 203103830 8.0E-06 AAGTTCTAAATGGGGAGTGA 20 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 203102755 203102766 9.0E-06 TTACATAACTAA 12 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 203103653 203103666 4.0E-06 CCAAATATGTTTAT 14 V_FOXP1_01_M00987 TRANSFAC + 203102452 203102471 2.0E-06 TTTTCTTTCTTGGTTATTAT 20 V_MEIS1_02_M01419 TRANSFAC - 203103447 203103462 2.0E-06 AAGGAGCTGACAAAAC 16 V_FREAC7_01_M00293 TRANSFAC - 203103656 203103671 0.0E+00 TTCAAATAAACATATT 16 V_PREP1_01_M01459 TRANSFAC - 203103447 203103462 6.0E-06 AAGGAGCTGACAAAAC 16 V_ATF5_01_M01295 TRANSFAC + 203103255 203103265 6.0E-06 CTTCTCCCTTC 11 V_XFD1_01_M00267 TRANSFAC - 203103656 203103669 2.0E-06 CAAATAAACATATT 14 V_FOXA2_04_M02749 TRANSFAC - 203103655 203103671 8.0E-06 TTCAAATAAACATATTT 17 V_HNF1_02_M01379 TRANSFAC - 203103701 203103717 4.0E-06 TGCTGGTTAACCGAAAA 17 V_ZEC_01_M01081 TRANSFAC - 203103551 203103563 3.0E-06 CAATCTAGGTTGT 13 V_FOXD3_01_M00130 TRANSFAC + 203103657 203103668 0.0E+00 ATATGTTTATTT 12 V_FOXO3A_Q1_M01137 TRANSFAC - 203103656 203103667 7.0E-06 AATAAACATATT 12 V_FOXJ1_03_M02750 TRANSFAC - 203103654 203103669 2.0E-06 CAAATAAACATATTTG 16 V_SP1_03_M02281 TRANSFAC + 203103044 203103053 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 203103064 203103073 3.0E-06 CCCCTCCCCC 10 V_HFH4_01_M00742 TRANSFAC + 203103657 203103669 3.0E-06 ATATGTTTATTTG 13 V_TGIF2_01_M01407 TRANSFAC - 203103447 203103462 2.0E-06 AAGGAGCTGACAAAAC 16 V_SPIC_01_M02042 TRANSFAC - 203103293 203103302 9.0E-06 AGCGGAAGTT 10 V_SPIC_01_M02042 TRANSFAC - 203103314 203103323 9.0E-06 AGCGGAAGTG 10 V_MECP2_01_M01298 TRANSFAC + 203103239 203103253 8.0E-06 CCGGGGTTTACAAAT 15 V_MEIS2_01_M01488 TRANSFAC - 203103447 203103462 3.0E-06 AAGGAGCTGACAAAAC 16 V_DBP_Q6_01_M01872 TRANSFAC - 203102755 203102762 5.0E-06 TTATGTAA 8 V_TGIF_02_M01346 TRANSFAC + 203103446 203103462 9.0E-06 AGTTTTGTCAGCTCCTT 17 V_ZFP105_03_M02827 TRANSFAC + 203103743 203103757 0.0E+00 TTAAAACAACAAGAA 15 V_E4BP4_01_M00045 TRANSFAC - 203102753 203102764 0.0E+00 AGTTATGTAACG 12 V_COUP_01_M00158 TRANSFAC - 203103504 203103517 5.0E-06 GGACCTTTGCTCCT 14 V_SOX8_04_M02912 TRANSFAC - 203102464 203102477 3.0E-06 GCATTCATAATAAC 14 V_E2F1_01_M01250 TRANSFAC - 203102518 203102525 1.0E-05 CGTTTCTT 8 V_PAX9_B_M00329 TRANSFAC + 203102572 203102595 9.0E-06 AAGACTCAGAGGAGAGCAGCGGCA 24 V_KROX_Q6_M00982 TRANSFAC + 203103039 203103052 2.0E-06 GCCGCCCCCTCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 203103045 203103054 4.0E-06 CCCTCCCCCA 10 V_MAZ_Q6_01_M02023 TRANSFAC - 203103060 203103073 1.0E-06 GGGGGAGGGGAGCG 14 V_HNF3_Q6_M00791 TRANSFAC - 203103658 203103670 6.0E-06 TCAAATAAACATA 13 V_GADP_01_M01258 TRANSFAC + 203103314 203103325 5.0E-06 CACTTCCGCTTC 12 V_NFE4_Q5_M02105 TRANSFAC + 203103013 203103024 1.0E-06 CTCCCTCGCCTG 12 V_SP1SP3_Q4_M01219 TRANSFAC + 203103040 203103050 1.0E-06 CCGCCCCCTCC 11 V_XFD2_01_M00268 TRANSFAC - 203103656 203103669 2.0E-06 CAAATAAACATATT 14 V_HFH1_01_M00129 TRANSFAC + 203103657 203103668 3.0E-06 ATATGTTTATTT 12 V_CDC5_01_M00478 TRANSFAC + 203103740 203103751 3.0E-06 GATTTAAAACAA 12 V_TGIF1_01_M03111 TRANSFAC + 203103446 203103462 9.0E-06 AGTTTTGTCAGCTCCTT 17 V_HFH8_01_M00294 TRANSFAC + 203103657 203103669 0.0E+00 ATATGTTTATTTG 13 V_GABPBETA_Q3_M01876 TRANSFAC - 203103313 203103323 1.0E-06 AGCGGAAGTGA 11 V_MRG2_01_M01395 TRANSFAC - 203103447 203103462 3.0E-06 AAGGAGCTGACAAAAC 16 V_TAL1_01_M01591 TRANSFAC - 203103343 203103355 4.0E-06 CTCTCTTCTCTCT 13 V_FOXL1_02_M02857 TRANSFAC + 203103740 203103755 5.0E-06 GATTTAAAACAACAAG 16 V_FOXL1_04_M02753 TRANSFAC - 203103655 203103671 6.0E-06 TTCAAATAAACATATTT 17 V_E2F6_01_M01252 TRANSFAC - 203102518 203102525 1.0E-05 CGTTTCTT 8 V_TCF1_06_M02815 TRANSFAC - 203103701 203103717 8.0E-06 TGCTGGTTAACCGAAAA 17 V_FPM315_01_M01587 TRANSFAC + 203103329 203103340 1.0E-06 CAGGGAGGAGGG 12 V_HNF1B_01_M01425 TRANSFAC + 203103703 203103719 4.0E-06 TTCGGTTAACCAGCACC 17 V_SRF_01_M00152 TRANSFAC - 203103649 203103666 9.0E-06 ATAAACATATTTGGGGGT 18 V_PLZF_02_M01075 TRANSFAC - 203103729 203103757 1.0E-06 TTCTTGTTGTTTTAAATCACGGTCATGTG 29 V_ZFP281_01_M01597 TRANSFAC - 203103044 203103054 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 203103064 203103074 7.0E-06 CGGGGGAGGGG 11 V_SRF_06_M02916 TRANSFAC + 203103741 203103757 8.0E-06 ATTTAAAACAACAAGAA 17 V_HFH3_01_M00289 TRANSFAC + 203103657 203103669 2.0E-06 ATATGTTTATTTG 13 V_FOXJ2_01_M00422 TRANSFAC - 203103655 203103672 0.0E+00 ATTCAAATAAACATATTT 18 V_SATB1_01_M01232 TRANSFAC - 203102465 203102476 8.0E-06 CATTCATAATAA 12 V_HLF_01_M00260 TRANSFAC + 203102754 203102763 7.0E-06 GTTACATAAC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 203103063 203103076 4.0E-06 CGCGGGGGAGGGGA 14 V_HNF4_01_M00134 TRANSFAC + 203103502 203103520 9.0E-06 CCAGGAGCAAAGGTCCTGG 19 V_ELK1_03_M01163 TRANSFAC - 203103314 203103324 1.0E-05 AAGCGGAAGTG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.