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TTC4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7268 tetratricopeptide repeat domain 4 chr1 + 55176494 - 55181994 55181494 Transcription Factor Binding Sites   Download all TFBS in the TTC4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 55182203 55182213 2.0E-06 AATGAGTCATG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 55182203 55182213 1.0E-06 CATGACTCATT 11 SP8_C2H2_DBD_monomeric_12_1 SELEX + 55181443 55181454 3.0E-06 GCCACGCCCCCA 12 E2F3_E2F_DBD_dimeric_18_2 SELEX + 55182029 55182046 5.0E-06 CATAAGGGCGCTCAATTA 18 SP3_C2H2_DBD_monomeric_11_1 SELEX + 55181443 55181453 3.0E-06 GCCACGCCCCC 11 NFIA_NFI_full_dimeric_15_1 SELEX + 55182011 55182025 6.0E-06 TTGGTAAAGTGCCAA 15 NFIA_NFI_full_dimeric_15_1 SELEX - 55182011 55182025 7.0E-06 TTGGCACTTTACCAA 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 55181443 55181453 1.0E-06 GCCACGCCCCC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 55182258 55182270 7.0E-06 GTAAATGGTTAAG 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 55182090 55182107 2.0E-06 ATCATTAGAGACCATTAC 18 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 55181442 55181455 5.0E-06 GGCCACGCCCCCAG 14 EWSR1-FLI1_MA0149.1 JASPAR + 55181492 55181509 7.0E-06 GGGAGGATTGAGGGAAGG 18 STAT1_MA0137.2 JASPAR - 55181627 55181641 6.0E-06 CTTTTCCAGGAACGA 15 STAT1_MA0137.2 JASPAR + 55182264 55182278 7.0E-06 CATTTACAGGAATTT 15 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 55181612 55181623 8.0E-06 GACGACGTCATG 12 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 55181900 55181908 2.0E-06 ACCACTTAA 9 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 55181900 55181908 2.0E-06 ACCACTTAA 9 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 55182187 55182195 8.0E-06 GTAAAAAAA 9 POU2F3_POU_DBD_dimeric_12_1 SELEX - 55182236 55182247 6.0E-06 ATGAATAAGCTT 12 SRY_MA0084.1 JASPAR + 55182083 55182091 7.0E-06 TAAAACAAT 9 SP4_C2H2_full_monomeric_17_1 SELEX + 55181440 55181456 8.0E-06 CCGGCCACGCCCCCAGG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 55181443 55181453 5.0E-06 GCCACGCCCCC 11 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 55181900 55181909 2.0E-06 ACCACTTAAC 10 Stat3_MA0144.1 JASPAR + 55181630 55181639 4.0E-06 TTCCTGGAAA 10 NFIB_NFI_full_dimeric_15_1 SELEX + 55182011 55182025 5.0E-06 TTGGTAAAGTGCCAA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 55182011 55182025 8.0E-06 TTGGCACTTTACCAA 15 JDP2_bZIP_full_dimeric_9_1 SELEX + 55182204 55182212 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 55182204 55182212 2.0E-06 ATGACTCAT 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 55182236 55182247 1.0E-05 ATGAATAAGCTT 12 FOXC1_MA0032.1 JASPAR + 55181283 55181290 7.0E-06 AGTAAGTA 8 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 55181900 55181910 5.0E-06 ACCACTTAACT 11 POU3F3_POU_DBD_dimeric_12_1 SELEX - 55182236 55182247 9.0E-06 ATGAATAAGCTT 12 NFIA_NFI_full_monomeric_10_1 SELEX + 55182018 55182027 9.0E-06 AGTGCCAAGA 10 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 55182240 55182251 3.0E-06 CTACATGAATAA 12 V_MYB_Q6_M00183 TRANSFAC + 55181904 55181913 4.0E-06 CTTAACTGGC 10 V_FOXP1_01_M00987 TRANSFAC + 55182240 55182259 6.0E-06 TTATTCATGTAGTTCATTCT 20 V_AP1_Q2_M00173 TRANSFAC - 55181919 55181929 5.0E-06 ACTGACTCATA 11 V_STAT5A_Q6_M01890 TRANSFAC - 55181630 55181642 3.0E-06 ACTTTTCCAGGAA 13 V_STAT3_01_M00225 TRANSFAC - 55182261 55182281 1.0E-05 TTCAAATTCCTGTAAATGGTT 21 V_GAF_Q6_M01209 TRANSFAC - 55182269 55182279 5.0E-06 CAAATTCCTGT 11 V_FOXP3_Q4_M00992 TRANSFAC + 55182233 55182249 3.0E-06 GAAAAGCTTATTCATGT 17 V_MEQCJUN_02_M02048 TRANSFAC + 55181612 55181622 5.0E-06 GACGACGTCAT 11 V_BACH2_01_M00490 TRANSFAC + 55182203 55182213 9.0E-06 AATGAGTCATG 11 V_NF1_Q6_01_M00806 TRANSFAC + 55182011 55182027 0.0E+00 TTGGTAAAGTGCCAAGA 17 V_MYB_03_M02883 TRANSFAC - 55182002 55182017 7.0E-06 TTACCAACTGTCTCAT 16 V_CEBP_Q3_M00770 TRANSFAC + 55182194 55182205 5.0E-06 AACTTTGGTAAT 12 V_NF1A_Q6_M02103 TRANSFAC + 55182011 55182026 9.0E-06 TTGGTAAAGTGCCAAG 16 V_HMGIY_Q3_M01010 TRANSFAC - 55182269 55182283 8.0E-06 TTTTCAAATTCCTGT 15 V_BCL6_01_M01183 TRANSFAC + 55182184 55182199 9.0E-06 TGAGTAAAAAAACTTT 16 V_GABP_B_M00341 TRANSFAC + 55181261 55181272 2.0E-06 GCCGGAAGCGCA 12 V_HFH4_01_M00742 TRANSFAC - 55182084 55182096 6.0E-06 TAATGATTGTTTT 13 V_E2A_Q2_M00804 TRANSFAC - 55182001 55182014 9.0E-06 CCAACTGTCTCATT 14 V_AP1_Q6_M00174 TRANSFAC - 55182203 55182213 4.0E-06 CATGACTCATT 11 V_BACH1_01_M00495 TRANSFAC + 55182201 55182215 2.0E-06 GTAATGAGTCATGGA 15 V_GC_01_M00255 TRANSFAC - 55181441 55181454 9.0E-06 TGGGGGCGTGGCCG 14 V_HNF1_Q6_M00790 TRANSFAC + 55182249 55182266 8.0E-06 TAGTTCATTCTTAACCAT 18 V_NKX31_02_M02782 TRANSFAC + 55181896 55181912 5.0E-06 CTCCACCACTTAACTGG 17 V_XFD3_01_M00269 TRANSFAC + 55182184 55182197 7.0E-06 TGAGTAAAAAAACT 14 V_MRF2_01_M00454 TRANSFAC - 55181819 55181832 1.0E-05 ATTTTCAATACTCA 14 V_AP1_Q6_01_M00925 TRANSFAC - 55182204 55182212 4.0E-06 ATGACTCAT 9 V_RXRA_04_M02895 TRANSFAC + 55182244 55182259 2.0E-06 TCATGTAGTTCATTCT 16 V_HNF1_Q6_01_M01011 TRANSFAC - 55182247 55182267 2.0E-06 AATGGTTAAGAATGAACTACA 21 V_NKX25_Q5_M01043 TRANSFAC - 55181319 55181328 6.0E-06 TCTCACTTCA 10 V_JUNDM2_04_M02876 TRANSFAC + 55182200 55182215 6.0E-06 GGTAATGAGTCATGGA 16 V_AP1_C_M00199 TRANSFAC + 55181920 55181928 3.0E-06 ATGAGTCAG 9 V_AP1_C_M00199 TRANSFAC + 55182204 55182212 8.0E-06 ATGAGTCAT 9 V_OCAB_Q6_M02113 TRANSFAC - 55182168 55182178 0.0E+00 ATTTGCAAATC 11 V_OCAB_Q6_M02113 TRANSFAC + 55182169 55182179 0.0E+00 ATTTGCAAATC 11 V_ATF1_04_M02842 TRANSFAC + 55181301 55181314 5.0E-06 GACTGACGAACAAA 14 V_SOX17_04_M02904 TRANSFAC + 55182236 55182252 3.0E-06 AAGCTTATTCATGTAGT 17 V_GR_Q6_02_M01836 TRANSFAC - 55182023 55182035 4.0E-06 CCTTATGTTCTTG 13 V_AP1_Q4_01_M00926 TRANSFAC + 55182205 55182212 1.0E-05 TGAGTCAT 8 V_HBP1_04_M02866 TRANSFAC + 55182112 55182128 9.0E-06 CACTCCCATTTTACAGA 17 V_TAL1_01_M01591 TRANSFAC + 55181951 55181963 4.0E-06 TTTCCTCATCTGT 13 V_FRA1_Q5_M01267 TRANSFAC + 55182205 55182212 1.0E-05 TGAGTCAT 8 V_FPM315_01_M01587 TRANSFAC + 55181416 55181427 4.0E-06 GGGGGAGGAGCG 12 V_MYB_Q3_M00773 TRANSFAC - 55181906 55181916 2.0E-06 AGAGCCAGTTA 11 V_STAT1STAT1_Q3_M01212 TRANSFAC - 55181628 55181640 8.0E-06 TTTTCCAGGAACG 13 V_SRF_06_M02916 TRANSFAC + 55182183 55182199 6.0E-06 ATGAGTAAAAAAACTTT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 55181492 55181509 7.0E-06 GGGAGGATTGAGGGAAGG 18 V_NFE2_01_M00037 TRANSFAC - 55181920 55181930 6.0E-06 AACTGACTCAT 11 V_NFE2_01_M00037 TRANSFAC + 55182202 55182212 8.0E-06 TAATGAGTCAT 11 V_TCF11MAFG_01_M00284 TRANSFAC - 55182196 55182217 6.0E-06 ATTCCATGACTCATTACCAAAG 22 V_STAT1_05_M01260 TRANSFAC - 55182257 55182278 4.0E-06 AAATTCCTGTAAATGGTTAAGA 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.