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SNRPD3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
6634 small nuclear ribonucleoprotein D3 polypeptide 18kDa chr22 +24946617 - 24952117 24951617

Transcription Factor Binding Sites

 
Download all TFBS in the SNRPD3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 24950293 24950311 1.0E-06 GAGTGACACCTGAAGGTCA 19
IRF7_IRF_DBD_dimeric_14_1 SELEX + 24950529 24950542 6.0E-06 ACGAAAGTGAAGAA 14
KLF16_C2H2_DBD_monomeric_11_1 SELEX + 24951155 24951165 1.0E-05 GCCCCGCCCCC 11
SOX2_HMG_full_dimeric_17_1 SELEX - 24951600 24951616 3.0E-06 TCACAATTTCATTTGTT 17
PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 24950079 24950096 1.0E-05 GTTATGAGGATTAATGAG 18
PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 24950079 24950096 7.0E-06 CTCATTAATCCTCATAAC 18
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 24950324 24950336 1.0E-06 AAGAGGTCAACAG 13
KLF14_C2H2_DBD_monomeric_14_1 SELEX + 24951318 24951331 9.0E-06 AGCCCCGCCCCTTT 14
SRY_HMG_DBD_dimeric_16_1 SELEX - 24951600 24951615 4.0E-06 CACAATTTCATTTGTT 16
Esrrb_MA0141.1 JASPAR + 24950300 24950311 8.0E-06 ACCTGAAGGTCA 12
SOX15_HMG_full_dimeric_15_3 SELEX - 24950152 24950166 4.0E-06 ATGGCTTACATTCAC 15
Klf4_MA0039.2 JASPAR - 24951257 24951266 1.0E-05 AGGGTGGGGC 10
OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 24950079 24950093 1.0E-05 ATTAATCCTCATAAC 15
TCF7L1_HMG_full_monomeric_12_1 SELEX - 24951185 24951196 1.0E-06 TAAGATCAAAGT 12
LEF1_HMG_DBD_monomeric_15_1 SELEX - 24951182 24951196 2.0E-06 TAAGATCAAAGTTTG 15
Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 24951156 24951171 7.0E-06 CCCCGCCCCCTCCTTA 16
ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 24950294 24950311 2.0E-06 AGTGACACCTGAAGGTCA 18
SOX2_HMG_full_dimeric_15_1 SELEX - 24950152 24950166 7.0E-06 ATGGCTTACATTCAC 15
SOX2_HMG_full_dimeric_15_1 SELEX + 24950470 24950484 2.0E-06 TTGAATACCAGTCCG 15
RELA_MA0107.1 JASPAR - 24950773 24950782 9.0E-06 GGGGGTTTCC 10
OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 24950085 24950092 7.0E-06 TTAATCCT 8
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 24950296 24950311 3.0E-06 TGACACCTGAAGGTCA 16
SP1_MA0079.2 JASPAR + 24951156 24951165 7.0E-06 CCCCGCCCCC 10
znf143_MA0088.1 JASPAR - 24951939 24951958 1.0E-06 TAACACCCAGAATTCCACTC 20
SP4_C2H2_full_monomeric_17_1 SELEX + 24951152 24951168 1.0E-06 GAGGCCCCGCCCCCTCC 17
SP4_C2H2_full_monomeric_17_1 SELEX + 24951170 24951186 7.0E-06 TAGGCCCCGCCCCAAAC 17
SP4_C2H2_full_monomeric_17_1 SELEX + 24951316 24951332 0.0E+00 GAAGCCCCGCCCCTTTC 17
Tcf7_HMG_DBD_monomeric_12_1 SELEX - 24951185 24951196 1.0E-06 TAAGATCAAAGT 12
SOX14_HMG_DBD_dimeric_15_1 SELEX + 24950470 24950484 2.0E-06 TTGAATACCAGTCCG 15
SOX7_HMG_full_dimeric_16_1 SELEX - 24951600 24951615 3.0E-06 CACAATTTCATTTGTT 16
MZF1_5-13_MA0057.1 JASPAR - 24950424 24950433 4.0E-06 GGAGGGGGAA 10
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 24950524 24950538 1.0E-05 AGAGAACGAAAGTGA 15
FEV_MA0156.1 JASPAR - 24951359 24951366 1.0E-05 CAGGAAAT 8
Myf_MA0055.1 JASPAR + 24950219 24950230 9.0E-06 AGACAACTGGAG 12
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 24951182 24951195 8.0E-06 AAGATCAAAGTTTG 14
DMBX1_homeodomain_DBD_monomeric_10_1 SELEX + 24950084 24950093 7.0E-06 GAGGATTAAT 10
ETV6_ETS_full_dimeric_15_1 SELEX - 24951008 24951022 3.0E-06 GCCGAAGCGGAAGCT 15
Sox1_HMG_DBD_dimeric_15_2 SELEX - 24950152 24950166 7.0E-06 ATGGCTTACATTCAC 15
Sox1_HMG_DBD_dimeric_15_2 SELEX + 24950470 24950484 7.0E-06 TTGAATACCAGTCCG 15
V_CEBPG_Q6_M00622 TRANSFAC + 24950350 24950362 8.0E-06 TTCACTTCAGAGT 13
V_OBOX6_01_M01445 TRANSFAC + 24950080 24950094 2.0E-06 TTATGAGGATTAATG 15
V_ER_Q6_02_M00959 TRANSFAC + 24950305 24950315 8.0E-06 AAGGTCAGGGT 11
V_EVI1_05_M00082 TRANSFAC - 24950194 24950204 5.0E-06 AGACAAGATAC 11
V_ATF5_01_M01295 TRANSFAC + 24947203 24947213 9.0E-06 TCTCTTCCTTC 11
V_FOXA2_04_M02749 TRANSFAC + 24950101 24950117 6.0E-06 TGCATGTAAACAACTGC 17
V_OBOX1_01_M01450 TRANSFAC + 24950080 24950096 6.0E-06 TTATGAGGATTAATGAG 17
V_OBOX1_01_M01450 TRANSFAC - 24950238 24950254 9.0E-06 GGTGGGGGATTTACAAC 17
V_FOXO4_02_M00476 TRANSFAC - 24950103 24950116 0.0E+00 CAGTTGTTTACATG 14
V_RELBP52_01_M01239 TRANSFAC - 24950773 24950782 3.0E-06 GGGGGTTTCC 10
V_SP1_Q6_01_M00931 TRANSFAC - 24951319 24951328 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 24951338 24951347 4.0E-06 GGGGCGGGGC 10
V_GABPA_04_M02858 TRANSFAC + 24950419 24950434 2.0E-06 ACGTCTTCCCCCTCCC 16
V_SP1_03_M02281 TRANSFAC + 24951156 24951165 7.0E-06 CCCCGCCCCC 10
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 24950876 24950891 6.0E-06 CGTTCCTAGGGTGAAG 16
V_PU1_Q4_M01172 TRANSFAC + 24947202 24947220 5.0E-06 TTCTCTTCCTTCCTCTTAA 19
V_ZFP281_05_M02935 TRANSFAC + 24950772 24950788 1.0E-06 AGGAAACCCCCACTGAC 17
V_LYF1_01_M00141 TRANSFAC + 24951930 24951938 9.0E-06 TTTGGGAAA 9
V_MYBL1_04_M02884 TRANSFAC + 24951481 24951495 9.0E-06 CCTCCAACTGTCTTT 15
V_HELIOSA_01_M01003 TRANSFAC + 24951493 24951503 0.0E+00 TTTAGGGATAA 11
V_PPARGRXRA_01_M02262 TRANSFAC - 24950328 24950342 8.0E-06 CTGTGGAAGAGGTCA 15
V_COMP1_01_M00057 TRANSFAC - 24946672 24946695 8.0E-06 AGGTTGGAAAGGCCAGGACAGATC 24
V_GC_01_M00255 TRANSFAC - 24951153 24951166 0.0E+00 AGGGGGCGGGGCCT 14
V_GC_01_M00255 TRANSFAC - 24951171 24951184 4.0E-06 TTGGGGCGGGGCCT 14
V_GC_01_M00255 TRANSFAC - 24951317 24951330 0.0E+00 AAGGGGCGGGGCTT 14
V_GC_01_M00255 TRANSFAC - 24951389 24951402 5.0E-06 CAGAGGCGGGGCTT 14
V_MECP2_01_M01298 TRANSFAC + 24951592 24951606 0.0E+00 CCGGGATCAACAAAT 15
V_MYF_01_M01302 TRANSFAC + 24950219 24950230 9.0E-06 AGACAACTGGAG 12
V_FOXO1_02_M00474 TRANSFAC - 24950103 24950116 3.0E-06 CAGTTGTTTACATG 14
V_HNF4_01_B_M00411 TRANSFAC - 24951181 24951195 9.0E-06 AAGATCAAAGTTTGG 15
V_STAF_01_M00262 TRANSFAC - 24951936 24951957 6.0E-06 AACACCCAGAATTCCACTCTTT 22
V_SP4_03_M02810 TRANSFAC + 24951154 24951170 0.0E+00 GGCCCCGCCCCCTCCTT 17
V_KROX_Q6_M00982 TRANSFAC - 24950801 24950814 2.0E-06 CTCGCCCCCACACC 14
V_SP1_Q6_M00196 TRANSFAC - 24951154 24951166 0.0E+00 AGGGGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC - 24951318 24951330 1.0E-06 AAGGGGCGGGGCT 13
V_HNF3A_01_M01261 TRANSFAC + 24950104 24950113 1.0E-06 ATGTAAACAA 10
V_OCT1_05_M00161 TRANSFAC - 24947169 24947182 7.0E-06 GGGCTTAGCATACC 14
V_OBOX2_01_M01364 TRANSFAC + 24950080 24950096 9.0E-06 TTATGAGGATTAATGAG 17
V_OBOX2_01_M01364 TRANSFAC - 24950238 24950254 7.0E-06 GGTGGGGGATTTACAAC 17
V_CMYB_01_M00004 TRANSFAC - 24951481 24951498 2.0E-06 CCTAAAGACAGTTGGAGG 18
V_SP1SP3_Q4_M01219 TRANSFAC + 24951158 24951168 1.0E-06 CCGCCCCCTCC 11
V_EVI1_Q3_M02002 TRANSFAC + 24950195 24950203 2.0E-06 TATCTTGTC 9
V_DAX1_01_M01248 TRANSFAC - 24946728 24946747 7.0E-06 GCTGGGGAAGGTCAGACATA 20
V_DAX1_01_M01248 TRANSFAC + 24950298 24950317 2.0E-06 ACACCTGAAGGTCAGGGTCC 20
V_CRX_02_M01436 TRANSFAC + 24950080 24950095 6.0E-06 TTATGAGGATTAATGA 16
V_KLF7_03_M02773 TRANSFAC + 24951170 24951185 3.0E-06 TAGGCCCCGCCCCAAA 16
V_KLF7_03_M02773 TRANSFAC + 24951316 24951331 4.0E-06 GAAGCCCCGCCCCTTT 16
V_KLF7_03_M02773 TRANSFAC + 24951335 24951350 3.0E-06 TGAGCCCCGCCCCAAA 16
V_XFD2_01_M00268 TRANSFAC + 24950103 24950116 1.0E-05 CATGTAAACAACTG 14
V_HNF4_DR1_Q3_M00764 TRANSFAC + 24951627 24951639 8.0E-06 TGGCCCTTGGCCC 13
V_STAF_02_M00264 TRANSFAC - 24951919 24951939 1.0E-06 CTTTCCCAAAATGCTGCGCGC 21
V_SP1_01_M00008 TRANSFAC - 24950845 24950854 7.0E-06 GGGGCAGGGT 10
V_MZF1_02_M00084 TRANSFAC - 24950424 24950436 6.0E-06 AGGGGAGGGGGAA 13
V_EVI1_06_M00011 TRANSFAC - 24950194 24950202 9.0E-06 ACAAGATAC 9
V_BCL6B_04_M02844 TRANSFAC + 24951337 24951352 5.0E-06 AGCCCCGCCCCAAAGC 16
V_NEUROD_02_M01288 TRANSFAC + 24951643 24951654 2.0E-06 CTCCTGCTGTCC 12
V_SP4_Q5_M01273 TRANSFAC + 24951155 24951165 1.0E-06 GCCCCGCCCCC 11
V_SP4_Q5_M01273 TRANSFAC + 24951319 24951329 8.0E-06 GCCCCGCCCCT 11
V_HFH8_01_M00294 TRANSFAC - 24950103 24950115 4.0E-06 AGTTGTTTACATG 13
V_OBOX2_02_M03064 TRANSFAC + 24950080 24950096 9.0E-06 TTATGAGGATTAATGAG 17
V_OBOX2_02_M03064 TRANSFAC - 24950238 24950254 7.0E-06 GGTGGGGGATTTACAAC 17
V_TAL1_01_M01591 TRANSFAC - 24952013 24952025 4.0E-06 TTTTCTTCTCTTC 13
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 24951259 24951267 8.0E-06 GAGGGTGGG 9
V_T3R_Q6_M00963 TRANSFAC + 24951699 24951707 7.0E-06 CCTGTCCTT 9
V_PLAG1_01_M01778 TRANSFAC - 24951162 24951177 0.0E+00 GGGGCCTAAGGAGGGG 16
V_NANOG_01_M01123 TRANSFAC + 24946765 24946776 1.0E-06 GAGGCCATTTCC 12
V_PITX1_01_M01484 TRANSFAC + 24950080 24950096 3.0E-06 TTATGAGGATTAATGAG 17
V_ERR2_01_M01589 TRANSFAC + 24950303 24950314 9.0E-06 TGAAGGTCAGGG 12
V_FPM315_01_M01587 TRANSFAC + 24950227 24950238 4.0E-06 GGAGGAGGAGGG 12
V_OTX2_01_M01387 TRANSFAC + 24950081 24950097 9.0E-06 TATGAGGATTAATGAGG 17
V_MEF3_B_M00319 TRANSFAC + 24950502 24950514 2.0E-06 GGCTCAGGCTACC 13
V_LEF1TCF1_Q4_M00978 TRANSFAC + 24951185 24951195 1.0E-06 ACTTTGATCTT 11
V_IRF1_Q6_01_M01881 TRANSFAC - 24951600 24951613 6.0E-06 CAATTTCATTTGTT 14
V_SOX14_04_M02901 TRANSFAC - 24948991 24949007 8.0E-06 GGCTTGGGTGGGTCTTT 17
V_PLAGL1_03_M02786 TRANSFAC - 24951566 24951581 6.0E-06 TAAGGGGGGCCCTGAG 16
V_GSC_01_M01428 TRANSFAC - 24950081 24950097 3.0E-06 CCTCATTAATCCTCATA 17
V_PITX2_01_M01447 TRANSFAC + 24950081 24950097 8.0E-06 TATGAGGATTAATGAGG 17
V_SP1_Q2_01_M00933 TRANSFAC + 24951156 24951165 4.0E-06 CCCCGCCCCC 10
V_SP1_Q2_01_M00933 TRANSFAC + 24951320 24951329 7.0E-06 CCCCGCCCCT 10
V_ARP1_01_M00155 TRANSFAC + 24949001 24949016 6.0E-06 CCAAGCCCTGACCCCT 16
V_ARP1_01_M00155 TRANSFAC - 24952081 24952096 7.0E-06 CCAGCCCCTGGCCCCT 16
V_SP1_Q4_01_M00932 TRANSFAC - 24951154 24951166 0.0E+00 AGGGGGCGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC - 24951318 24951330 0.0E+00 AAGGGGCGGGGCT 13
V_OBOX6_02_M03068 TRANSFAC + 24950080 24950094 2.0E-06 TTATGAGGATTAATG 15
V_FEV_01_M02269 TRANSFAC - 24951359 24951366 1.0E-05 CAGGAAAT 8
V_OTX1_01_M01366 TRANSFAC + 24950081 24950097 8.0E-06 TATGAGGATTAATGAGG 17
V_EVI1_03_M00080 TRANSFAC - 24950194 24950204 2.0E-06 AGACAAGATAC 11
V_FOXK1_03_M02752 TRANSFAC + 24950101 24950117 4.0E-06 TGCATGTAAACAACTGC 17
PPARG_RXRA_MA0065.2 JASPAR - 24950328 24950342 8.0E-06 CTGTGGAAGAGGTCA 15
V_AP2_Q3_M00800 TRANSFAC + 24951845 24951860 3.0E-06 GCCGGCAGGCGGAGTG 16
V_OTX3_01_M01403 TRANSFAC + 24950080 24950096 1.0E-06 TTATGAGGATTAATGAG 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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