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SLC6A11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6538 solute carrier family 6 (neurotransmitter transporter, GABA), member 11 chr3 + 10852916 - 10858416 10857916 Transcription Factor Binding Sites   Download all TFBS in the SLC6A11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 10854156 10854173 0.0E+00 ACTTTAAATATTTACTTA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 10854156 10854173 0.0E+00 TAAGTAAATATTTAAAGT 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 10854158 10854170 3.0E-06 GTAAATATTTAAA 13 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 10854132 10854141 7.0E-06 GCCATAAAAT 10 POU2F1_POU_DBD_dimeric_14_1 SELEX - 10854158 10854171 1.0E-05 AGTAAATATTTAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 10854162 10854173 0.0E+00 TAAGTAAATATT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 10854163 10854175 3.0E-06 AGTAAGTAAATAT 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 10854163 10854173 0.0E+00 TAAGTAAATAT 11 ERG_ETS_full_dimeric_14_1 SELEX - 10859347 10859360 5.0E-06 ACAGGAAGTCCTGC 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 10854158 10854171 4.0E-06 TTTAAATATTTACT 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 10854158 10854171 3.0E-06 AGTAAATATTTAAA 14 LEF1_HMG_DBD_monomeric_15_1 SELEX + 10854111 10854125 3.0E-06 AAAGATCAAGGCTTT 15 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 10854131 10854140 7.0E-06 GGCCATAAAA 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 10854158 10854171 2.0E-06 TTTAAATATTTACT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 10854158 10854171 2.0E-06 AGTAAATATTTAAA 14 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 10853746 10853754 5.0E-06 CCCACTTAA 9 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 10854157 10854171 6.0E-06 AGTAAATATTTAAAG 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 10854131 10854141 3.0E-06 GGCCATAAAAT 11 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 10853751 10853758 7.0E-06 TTAATCCT 8 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 10859364 10859373 6.0E-06 AGCAGCTGCC 10 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 10854158 10854171 2.0E-06 TTTAAATATTTACT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 10854158 10854171 1.0E-06 AGTAAATATTTAAA 14 Gata1_MA0035.2 JASPAR + 10853800 10853810 0.0E+00 ACAGATAAGGA 11 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 10854158 10854170 8.0E-06 GTAAATATTTAAA 13 Foxd3_MA0041.1 JASPAR + 10854161 10854172 5.0E-06 AAATATTTACTT 12 MGA_TBX_DBD_dimeric_18_1 SELEX + 10858394 10858411 2.0E-06 ACGTGCCAATTCGCACCT 18 MGA_TBX_DBD_dimeric_18_1 SELEX - 10858394 10858411 1.0E-06 AGGTGCGAATTGGCACGT 18 PITX1_homeodomain_full_monomeric_9_1 SELEX + 10853750 10853758 9.0E-06 CTTAATCCT 9 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 10854158 10854171 1.0E-06 TTTAAATATTTACT 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 10854158 10854171 1.0E-06 AGTAAATATTTAAA 14 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 10854132 10854140 4.0E-06 GCCATAAAA 9 GSC2_homeodomain_DBD_monomeric_10_1 SELEX + 10853750 10853759 7.0E-06 CTTAATCCTC 10 IRF3_IRF_full_trimeric_21_1 SELEX + 10853801 10853821 1.0E-06 CAGATAAGGAAATGAAAACTC 21 NRF1_NRF_full_dimeric_12_1 SELEX + 10858383 10858394 3.0E-06 TGCGCACGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 10858383 10858394 4.0E-06 TGCGCGTGCGCA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 10854131 10854141 2.0E-06 GGCCATAAAAT 11 FLI1_ETS_full_monomeric_14_1 SELEX - 10859347 10859360 7.0E-06 ACAGGAAGTCCTGC 14 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 10854132 10854140 8.0E-06 GCCATAAAA 9 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 10854163 10854173 0.0E+00 TAAGTAAATAT 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 10854132 10854140 8.0E-06 GCCATAAAA 9 POU4F1_POU_DBD_monomeric_14_1 SELEX - 10854157 10854170 4.0E-06 GTAAATATTTAAAG 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 10854131 10854141 6.0E-06 GGCCATAAAAT 11 HNF1A_MA0046.1 JASPAR - 10854158 10854171 2.0E-06 AGTAAATATTTAAA 14 V_HOXA9_01_M01351 TRANSFAC + 10854129 10854145 3.0E-06 AGGGCCATAAAATAACC 17 V_MEQ_01_M02049 TRANSFAC - 10853944 10853952 9.0E-06 GACACACAT 9 V_HNF3B_01_M00131 TRANSFAC + 10854159 10854173 0.0E+00 TTAAATATTTACTTA 15 V_TGIF_01_M00418 TRANSFAC - 10853758 10853768 7.0E-06 AGTTGTCATGA 11 V_DBX1_01_M01483 TRANSFAC - 10854157 10854173 9.0E-06 TAAGTAAATATTTAAAG 17 V_GATA1_Q6_M02004 TRANSFAC + 10853797 10853811 0.0E+00 TTTACAGATAAGGAA 15 V_FOXA2_04_M02749 TRANSFAC - 10854159 10854175 1.0E-06 AGTAAGTAAATATTTAA 17 V_SREBP2_Q6_M01177 TRANSFAC - 10857758 10857769 8.0E-06 ACGCCACCTCAG 12 V_HMGIY_Q3_M01010 TRANSFAC - 10854184 10854198 7.0E-06 AGGTCAATTTCCTAT 15 V_FOXD3_01_M00130 TRANSFAC + 10854161 10854172 3.0E-06 AAATATTTACTT 12 V_SPDEF_04_M02915 TRANSFAC - 10854181 10854196 8.0E-06 GTCAATTTCCTATTTG 16 V_IRF_Q6_01_M00972 TRANSFAC + 10853808 10853818 1.0E-05 GGAAATGAAAA 11 V_HNF4_Q6_M00967 TRANSFAC - 10854152 10854160 7.0E-06 AAAGTCCAT 9 V_ARNT_01_M00236 TRANSFAC - 10858388 10858403 9.0E-06 ATTGGCACGTGCGCGT 16 V_EAR2_Q2_M01728 TRANSFAC - 10854098 10854111 5.0E-06 TTTACTCTGTCCTT 14 V_HNF3_Q6_01_M01012 TRANSFAC + 10854159 10854176 0.0E+00 TTAAATATTTACTTACTA 18 V_GATA_C_M00203 TRANSFAC + 10853802 10853812 3.0E-06 AGATAAGGAAA 11 V_HFH4_01_M00742 TRANSFAC + 10854161 10854173 7.0E-06 AAATATTTACTTA 13 V_PU1_Q4_M01172 TRANSFAC - 10853802 10853820 1.0E-06 AGTTTTCATTTCCTTATCT 19 V_CDX_Q5_M00991 TRANSFAC + 10853799 10853816 1.0E-06 TACAGATAAGGAAATGAA 18 V_LDSPOLYA_B_M00317 TRANSFAC + 10853990 10854005 3.0E-06 ACAGTGTGTGCTCTTC 16 V_NKX62_Q2_M00489 TRANSFAC - 10854162 10854173 8.0E-06 TAAGTAAATATT 12 V_MEF2A_Q6_M02024 TRANSFAC - 10854156 10854165 9.0E-06 TATTTAAAGT 10 V_TAL1_GATA1_01_M02243 TRANSFAC + 10853791 10853808 4.0E-06 CCTGATTTTACAGATAAG 18 V_COMP1_01_M00057 TRANSFAC - 10853848 10853871 7.0E-06 TGGTTTCAAAGCCAACTCCAAATG 24 V_GC_01_M00255 TRANSFAC - 10857841 10857854 3.0E-06 AGGGGGTGGAGCTG 14 V_FOXA2_02_M02853 TRANSFAC + 10854136 10854150 8.0E-06 TAAAATAACCAAGGA 15 V_FREAC3_01_M00291 TRANSFAC - 10854160 10854175 3.0E-06 AGTAAGTAAATATTTA 16 V_ARID5A_03_M02736 TRANSFAC - 10854156 10854169 4.0E-06 TAAATATTTAAAGT 14 V_HNF1_Q6_M00790 TRANSFAC - 10854155 10854172 6.0E-06 AAGTAAATATTTAAAGTC 18 V_NKX31_02_M02782 TRANSFAC + 10853742 10853758 2.0E-06 CTAACCCACTTAATCCT 17 V_NKX26_01_M01322 TRANSFAC + 10853743 10853758 3.0E-06 TAACCCACTTAATCCT 16 V_XFD3_01_M00269 TRANSFAC - 10854160 10854173 2.0E-06 TAAGTAAATATTTA 14 V_KROX_Q6_M00982 TRANSFAC - 10858036 10858049 1.0E-05 CGCGCCCCCGCTGC 14 V_HOXB9_01_M01426 TRANSFAC + 10854129 10854144 1.0E-06 AGGGCCATAAAATAAC 16 V_CDX2_01_M01449 TRANSFAC + 10854128 10854143 0.0E+00 AAGGGCCATAAAATAA 16 V_HNF3A_01_M01261 TRANSFAC - 10854163 10854172 5.0E-06 AAGTAAATAT 10 V_IRF_Q6_M00772 TRANSFAC - 10853808 10853822 7.0E-06 TGAGTTTTCATTTCC 15 V_MEF2_03_M00232 TRANSFAC + 10854150 10854171 7.0E-06 AGATGGACTTTAAATATTTACT 22 V_ELF5_01_M01197 TRANSFAC + 10853804 10853814 4.0E-06 ATAAGGAAATG 11 V_CDX1_01_M01373 TRANSFAC + 10854128 10854143 0.0E+00 AAGGGCCATAAAATAA 16 Tal1_Gata1_MA0140.1 JASPAR + 10853791 10853808 4.0E-06 CCTGATTTTACAGATAAG 18 V_PIT1_01_M01465 TRANSFAC - 10854156 10854172 9.0E-06 AAGTAAATATTTAAAGT 17 V_GRE_C_M00205 TRANSFAC - 10854098 10854113 5.0E-06 TTTTTACTCTGTCCTT 16 V_GRE_C_M00205 TRANSFAC - 10859348 10859363 9.0E-06 CGCACAGGAAGTCCTG 16 V_GATA1_09_M02254 TRANSFAC + 10853800 10853810 0.0E+00 ACAGATAAGGA 11 V_XFD2_01_M00268 TRANSFAC - 10854160 10854173 5.0E-06 TAAGTAAATATTTA 14 V_NCX_02_M01420 TRANSFAC + 10854160 10854176 2.0E-06 TAAATATTTACTTACTA 17 V_CETS1P54_01_M00032 TRANSFAC - 10859351 10859360 9.0E-06 ACAGGAAGTC 10 V_HNF4A_02_M02868 TRANSFAC - 10854149 10854164 8.0E-06 ATTTAAAGTCCATCTC 16 V_NKX32_02_M01482 TRANSFAC + 10853742 10853758 4.0E-06 CTAACCCACTTAATCCT 17 V_IRF7_01_M00453 TRANSFAC + 10853806 10853823 6.0E-06 AAGGAAATGAAAACTCAG 18 V_IRF7_01_M00453 TRANSFAC + 10854179 10854196 9.0E-06 TTCAAATAGGAAATTGAC 18 V_GCNF_01_M00526 TRANSFAC - 10854185 10854202 9.0E-06 AGCCAGGTCAATTTCCTA 18 V_NKX25_03_M01414 TRANSFAC + 10853743 10853758 9.0E-06 TAACCCACTTAATCCT 16 V_TAL1_01_M01591 TRANSFAC - 10853800 10853812 0.0E+00 TTTCCTTATCTGT 13 V_BRN4_01_M01473 TRANSFAC - 10854156 10854172 8.0E-06 AAGTAAATATTTAAAGT 17 V_HNF1_01_M00132 TRANSFAC - 10854157 10854171 3.0E-06 AGTAAATATTTAAAG 15 V_GATA1_04_M00128 TRANSFAC + 10853799 10853811 3.0E-06 TACAGATAAGGAA 13 V_ZFP206_01_M01742 TRANSFAC + 10858383 10858393 3.0E-06 TGCGCACGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 10858384 10858394 7.0E-06 TGCGCGTGCGC 11 V_NRF1_Q6_M00652 TRANSFAC - 10858383 10858392 6.0E-06 CGCGTGCGCA 10 V_LMO2COM_02_M00278 TRANSFAC + 10853801 10853809 3.0E-06 CAGATAAGG 9 V_PLZF_02_M01075 TRANSFAC + 10854148 10854176 8.0E-06 GGAGATGGACTTTAAATATTTACTTACTA 29 V_PLZF_02_M01075 TRANSFAC - 10854194 10854222 4.0E-06 TGGTTCCCTTTGTAAAAGTTAGCCAGGTC 29 V_T3RBETA_Q6_01_M02119 TRANSFAC + 10854338 10854354 6.0E-06 GAGTGAAACGAGGACAC 17 V_SRF_Q5_01_M00922 TRANSFAC + 10853800 10853814 7.0E-06 ACAGATAAGGAAATG 15 V_PUR1_Q4_M01721 TRANSFAC - 10854010 10854018 6.0E-06 GGGACAGTG 9 V_HFH3_01_M00289 TRANSFAC + 10854161 10854173 5.0E-06 AAATATTTACTTA 13 V_FOXJ2_01_M00422 TRANSFAC - 10854159 10854176 0.0E+00 TAGTAAGTAAATATTTAA 18 V_SOX18_04_M02905 TRANSFAC + 10854171 10854186 0.0E+00 TTACTAAATTCAAATA 16 V_HOXD8_01_M01432 TRANSFAC + 10854160 10854176 5.0E-06 TAAATATTTACTTACTA 17 V_GATA5_03_M02756 TRANSFAC + 10853797 10853813 0.0E+00 TTTACAGATAAGGAAAT 17 V_GATA1_02_M00126 TRANSFAC + 10853798 10853811 4.0E-06 TTACAGATAAGGAA 14 V_GATA6_04_M02757 TRANSFAC + 10853797 10853813 5.0E-06 TTTACAGATAAGGAAAT 17 V_HOXD10_01_M01375 TRANSFAC + 10854129 10854145 3.0E-06 AGGGCCATAAAATAACC 17 V_HNF1A_01_M02162 TRANSFAC - 10854158 10854171 2.0E-06 AGTAAATATTTAAA 14 V_AR_Q6_M00962 TRANSFAC - 10854326 10854334 6.0E-06 TGAGCACAA 9 V_GATA1_06_M00347 TRANSFAC + 10853800 10853809 1.0E-05 ACAGATAAGG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.