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POLR1E Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64425 polymerase (RNA) I polypeptide E, 53kDa chr9 + 37480944 - 37486444 37485944 Transcription Factor Binding Sites   Download all TFBS in the POLR1E promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 37482494 37482512 5.0E-06 ACACCAGCAGATGGAGATA 19 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 37487115 37487123 2.0E-06 AAAAGTCAA 9 STAT1_MA0137.2 JASPAR - 37487033 37487047 2.0E-06 GTTTTCCTAGAAGCT 15 NFYA_MA0060.1 JASPAR + 37485810 37485825 3.0E-06 CTGAGCCAATCAGGTG 16 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 37487556 37487563 1.0E-05 GCACTTAA 8 Pax4_MA0068.1 JASPAR + 37482387 37482416 1.0E-06 AAAAAAAAAAAAAAAAAAGAAGCCATTCCC 30 Pax4_MA0068.1 JASPAR + 37482388 37482417 0.0E+00 AAAAAAAAAAAAAAAAAGAAGCCATTCCCC 30 Pax4_MA0068.1 JASPAR + 37482389 37482418 1.0E-06 AAAAAAAAAAAAAAAAGAAGCCATTCCCCA 30 Pax4_MA0068.1 JASPAR + 37482390 37482419 3.0E-06 AAAAAAAAAAAAAAAGAAGCCATTCCCCAG 30 Pax4_MA0068.1 JASPAR + 37482392 37482421 1.0E-05 AAAAAAAAAAAAAGAAGCCATTCCCCAGAG 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 37482586 37482601 6.0E-06 AAAATGATACTAAAAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 37482586 37482601 9.0E-06 AAAATGATACTAAAAG 16 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 37487499 37487512 6.0E-06 GTATACAAAGAACA 14 SP1_MA0079.2 JASPAR - 37485891 37485900 7.0E-06 CCCCGCCCCC 10 ONECUT2_CUT_DBD_monomeric_14_1 SELEX - 37487111 37487124 9.0E-06 AAAAAGTCAATAGT 14 NFATC1_NFAT_full_dimeric_20_1 SELEX + 37482560 37482579 3.0E-06 TCTGGAAAACCATTTTCCTT 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 37482561 37482580 1.0E-06 GAAGGAAAATGGTTTTCCAG 20 Mycn_MA0104.2 JASPAR - 37487275 37487284 8.0E-06 CCCACGTGGC 10 Stat3_MA0144.1 JASPAR + 37487036 37487045 8.0E-06 TTCTAGGAAA 10 Myf_MA0055.1 JASPAR - 37486001 37486012 1.0E-05 AGACAGCAGCAG 12 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 37487338 37487356 1.0E-05 CCTTCCTTGGTGAGGTCAT 19 E2F3_E2F_DBD_dimeric_18_3 SELEX - 37487118 37487135 9.0E-06 ATTATTGGCCCAAAAAGT 18 GLIS2_C2H2_DBD_monomeric_14_1 SELEX - 37485884 37485897 8.0E-06 CGCCCCCCGCGTAG 14 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 37487111 37487124 4.0E-06 AAAAAGTCAATAGT 14 IRF2_MA0051.1 JASPAR + 37482584 37482601 6.0E-06 GAAAAATGATACTAAAAG 18 Zfx_MA0146.1 JASPAR - 37487056 37487069 6.0E-06 TGGGGCTAGGCCTG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 37487499 37487512 4.0E-06 GTATACAAAGAACA 14 V_STAT5A_Q6_M01890 TRANSFAC + 37487032 37487044 8.0E-06 AAGCTTCTAGGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 37487036 37487048 8.0E-06 TGTTTTCCTAGAA 13 V_BCL6_Q3_01_M02085 TRANSFAC - 37487036 37487045 6.0E-06 TTTCCTAGAA 10 V_CDX2_Q5_01_M01659 TRANSFAC - 37486994 37487004 2.0E-06 TCCATAAATGC 11 V_MEQCJUN_02_M02048 TRANSFAC + 37487346 37487356 4.0E-06 GGTGAGGTCAT 11 V_ISL1_Q6_M01127 TRANSFAC - 37482510 37482518 4.0E-06 GGGTAATAT 9 V_NF1_Q6_01_M00806 TRANSFAC + 37487039 37487055 1.0E-05 TAGGAAAACAGCCAAAT 17 V_ZFX_01_M01593 TRANSFAC - 37485957 37485972 3.0E-06 GCCCAGGCCGCGCTGC 16 V_BCL6_01_M01183 TRANSFAC - 37482586 37482601 8.0E-06 CTTTTAGTATCATTTT 16 V_ZFP740_04_M02938 TRANSFAC + 37487600 37487616 1.0E-05 GAATTCCCCCAAGAGCT 17 V_ZTA_Q2_M00711 TRANSFAC + 37487252 37487264 3.0E-06 ACACTTTTACACA 13 V_EGR_Q6_M00807 TRANSFAC + 37487144 37487154 6.0E-06 GTGGGGGCAGC 11 V_IRF2_Q6_M01882 TRANSFAC + 37482583 37482598 4.0E-06 TGAAAAATGATACTAA 16 V_STAT5B_01_M00459 TRANSFAC - 37487033 37487047 5.0E-06 GTTTTCCTAGAAGCT 15 V_FOXJ1_03_M02750 TRANSFAC + 37487496 37487511 9.0E-06 AGAGTATACAAAGAAC 16 V_SP1_03_M02281 TRANSFAC - 37485891 37485900 7.0E-06 CCCCGCCCCC 10 V_SP1_02_M01303 TRANSFAC + 37485892 37485902 8.0E-06 GGGGCGGGGAC 11 V_NFY_Q6_01_M00775 TRANSFAC + 37485809 37485821 2.0E-06 GCTGAGCCAATCA 13 V_ZFP691_03_M02833 TRANSFAC + 37486138 37486154 5.0E-06 GGAGCAGTGCTCCTCTA 17 V_PAX3_B_M00327 TRANSFAC + 37485672 37485692 4.0E-06 TGAGTTTGTCACGGTAGGAGA 21 V_HNF6_Q6_M00639 TRANSFAC - 37487112 37487123 1.0E-06 AAAAGTCAATAG 12 V_TAL1_Q6_M00993 TRANSFAC - 37482499 37482508 1.0E-06 TCCATCTGCT 10 V_HELIOSA_02_M01004 TRANSFAC + 37487037 37487047 6.0E-06 TCTAGGAAAAC 11 V_FOXA2_02_M02853 TRANSFAC - 37482471 37482485 5.0E-06 AACACTAACAAAGAC 15 V_MYF_01_M01302 TRANSFAC - 37486001 37486012 1.0E-05 AGACAGCAGCAG 12 V_BEL1_B_M00312 TRANSFAC + 37485741 37485768 3.0E-06 AGCAAGCTTAGGCTGAAGCCTTTGGCGC 28 V_HNF4_01_B_M00411 TRANSFAC + 37485514 37485528 9.0E-06 GTGGACAAAGTTTGT 15 V_PXRRXR_02_M01153 TRANSFAC + 37487073 37487080 1.0E-05 AGAGTTCA 8 V_RXRA_04_M02895 TRANSFAC + 37485516 37485531 8.0E-06 GGACAAAGTTTGTACC 16 V_MAZ_Q6_01_M02023 TRANSFAC + 37487311 37487324 5.0E-06 GTGGGAGGAGAGGT 14 V_IRF_Q6_M00772 TRANSFAC - 37482585 37482599 2.0E-06 TTTAGTATCATTTTT 15 V_STAT5A_02_M00460 TRANSFAC + 37482578 37482601 2.0E-06 TTCTCTGAAAAATGATACTAAAAG 24 V_REX1_03_M01744 TRANSFAC + 37486042 37486053 9.0E-06 GAGATGGCGGCG 12 V_DAX1_01_M01248 TRANSFAC - 37485637 37485656 9.0E-06 AAGGACCAAGTTCAAATTTA 20 V_ERALPHA_01_M01801 TRANSFAC + 37487294 37487308 3.0E-06 AGGGCAGAGTGAGCT 15 V_ERALPHA_01_M01801 TRANSFAC - 37487294 37487308 4.0E-06 AGCTCACTCTGCCCT 15 V_STAT4_Q5_M02117 TRANSFAC + 37487036 37487045 1.0E-06 TTCTAGGAAA 10 V_ISGF3G_03_M02771 TRANSFAC + 37482584 37482598 4.0E-06 GAAAAATGATACTAA 15 V_MYCN_01_M02259 TRANSFAC - 37487275 37487284 8.0E-06 CCCACGTGGC 10 V_PPARA_02_M00518 TRANSFAC + 37485647 37485665 9.0E-06 CTTGGTCCTTCAGGTCTTG 19 V_CTCF_02_M01259 TRANSFAC + 37482491 37482510 8.0E-06 GAAACACCAGCAGATGGAGA 20 V_STAT3_03_M01595 TRANSFAC + 37487034 37487049 0.0E+00 GCTTCTAGGAAAACAG 16 V_NEUROD_02_M01288 TRANSFAC + 37486001 37486012 1.0E-06 CTGCTGCTGTCT 12 V_SP4_Q5_M01273 TRANSFAC - 37485891 37485901 9.0E-06 TCCCCGCCCCC 11 V_ZFP105_04_M02931 TRANSFAC + 37487123 37487139 2.0E-06 TTGGGCCAATAATTCTT 17 V_CAAT_01_M00254 TRANSFAC + 37485810 37485821 8.0E-06 CTGAGCCAATCA 12 V_AP3_Q6_M00690 TRANSFAC + 37485635 37485642 5.0E-06 TCTAAATT 8 V_TAL1_01_M01591 TRANSFAC + 37482533 37482545 4.0E-06 TTTGCTTTTCTCC 13 V_TAL1_01_M01591 TRANSFAC - 37487441 37487453 7.0E-06 CCTGCTTCTCTGC 13 V_EOMES_04_M02851 TRANSFAC + 37486051 37486066 1.0E-06 GCGGAGGTGTTGCCGA 16 V_SP4_04_M02914 TRANSFAC - 37485935 37485949 2.0E-06 AAAAGGCGTGGCCCC 15 V_BARHL1_01_M01332 TRANSFAC + 37486989 37487004 9.0E-06 AACAAGCATTTATGGA 16 V_OCT1_Q6_M00195 TRANSFAC + 37487497 37487511 8.0E-06 GAGTATACAAAGAAC 15 V_AIRE_01_M00999 TRANSFAC + 37487415 37487440 9.0E-06 GAGTGAAAAGGATAGTGAGGACAAAT 26 V_NFY_01_M00287 TRANSFAC + 37485810 37485825 3.0E-06 CTGAGCCAATCAGGTG 16 V_ETS1_B_M00339 TRANSFAC - 37485612 37485626 5.0E-06 ACAGGAACTGCTTGA 15 V_SP1_Q2_01_M00933 TRANSFAC - 37485891 37485900 4.0E-06 CCCCGCCCCC 10 V_NFYA_Q5_M02106 TRANSFAC + 37485812 37485825 7.0E-06 GAGCCAATCAGGTG 14 V_SP1_Q4_01_M00932 TRANSFAC + 37485890 37485902 8.0E-06 GGGGGGCGGGGAC 13 V_STAT1_Q6_M01823 TRANSFAC + 37487036 37487045 2.0E-06 TTCTAGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 37487033 37487054 8.0E-06 AGCTTCTAGGAAAACAGCCAAA 22 V_PAX4_04_M00380 TRANSFAC + 37482387 37482416 3.0E-06 AAAAAAAAAAAAAAAAAAGAAGCCATTCCC 30 V_PAX4_04_M00380 TRANSFAC + 37482388 37482417 0.0E+00 AAAAAAAAAAAAAAAAAGAAGCCATTCCCC 30 V_PAX4_04_M00380 TRANSFAC + 37482393 37482422 1.0E-05 AAAAAAAAAAAAGAAGCCATTCCCCAGAGT 30 V_SOX9_Q4_M01284 TRANSFAC + 37487501 37487511 9.0E-06 ATACAAAGAAC 11

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