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SCN5A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6331 sodium channel, voltage-gated, type V, alpha subunit chr3 - 38690663 - 38696164 38691163 Transcription Factor Binding Sites   Download all TFBS in the SCN5A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CUX1_CUT_DBD_monomeric_10_1 SELEX - 38686155 38686164 5.0E-06 TGATCAATAT 2 Myc_MA0147.1 JASPAR + 38691323 38691332 7.0E-06 CGCACGTGGT 10 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 38687513 38687530 7.0E-06 GTGACCTTGGTAGGAGAA 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 38686213 38686224 0.0E+00 TCTAAAAATAGT 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 38688671 38688682 0.0E+00 ACTAAAAATAGC 12 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 38686247 38686257 5.0E-06 AGCCTGAGGCG 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 38686247 38686257 4.0E-06 CGCCTCAGGCT 11 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 38692817 38692830 2.0E-06 GACCACACAGGTCG 14 Esrrb_MA0141.1 JASPAR - 38688743 38688754 3.0E-06 AAGCCAAGGTCA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 38686213 38686224 0.0E+00 TCTAAAAATAGT 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 38688671 38688682 0.0E+00 ACTAAAAATAGC 12 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 38686247 38686257 9.0E-06 AGCCTGAGGCG 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 38686247 38686257 2.0E-06 CGCCTCAGGCT 11 SPIB_ETS_DBD_monomeric_14_1 SELEX + 38692889 38692902 8.0E-06 CAGAAGGGGAAGTG 14 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 38687513 38687530 8.0E-06 GTGACCTTGGTAGGAGAA 18 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 38688743 38688760 2.0E-06 GAGTTAAAGCCAAGGTCA 18 MEF2B_MADS_full_dimeric_12_1 SELEX + 38686213 38686224 0.0E+00 TCTAAAAATAGT 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 38688671 38688682 0.0E+00 ACTAAAAATAGC 12 T_MA0009.1 JASPAR - 38692948 38692958 3.0E-06 GTAGGTGTGAC 11 CUX2_CUT_DBD_monomeric_10_1 SELEX - 38686155 38686164 7.0E-06 TGATCAATAT 2 MEF2A_MA0052.1 JASPAR - 38686214 38686223 1.0E-06 CTATTTTTAG 10 MEF2A_MA0052.1 JASPAR + 38688672 38688681 1.0E-06 CTATTTTTAG 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 38687132 38687145 4.0E-06 ACAAACAGTAACCA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 38688743 38688759 2.0E-06 AGTTAAAGCCAAGGTCA 17 SP1_MA0079.2 JASPAR - 38691220 38691229 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 38691232 38691241 7.0E-06 CCCCGCCCCC 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 38688743 38688759 2.0E-06 AGTTAAAGCCAAGGTCA 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 38691220 38691230 4.0E-06 ACCCCGCCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 38691232 38691242 4.0E-06 ACCCCGCCCCC 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 38686247 38686257 8.0E-06 AGCCTGAGGCG 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 38686247 38686257 5.0E-06 CGCCTCAGGCT 11 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 38688741 38688751 6.0E-06 CCAAGGTCACA 11 SPI1_ETS_full_monomeric_14_1 SELEX + 38692889 38692902 1.0E-05 CAGAAGGGGAAGTG 14 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 38688681 38688699 5.0E-06 TTATCCTCAGTAATGTTAC 19 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 38686247 38686257 7.0E-06 AGCCTGAGGCG 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 38686247 38686257 2.0E-06 CGCCTCAGGCT 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 38687132 38687145 2.0E-06 ACAAACAGTAACCA 14 V_FOXP1_01_M00987 TRANSFAC - 38688212 38688231 4.0E-06 AAATTTGGGTTGGCAAGCTT 20 V_OSR1_03_M02784 TRANSFAC + 38692968 38692983 2.0E-06 GAGTACAGTAGCAGGA 16 V_HNF3B_01_M00131 TRANSFAC - 38687129 38687143 4.0E-06 GTTACTGTTTGTTCA 15 V_ER_Q6_02_M00959 TRANSFAC - 38688739 38688749 5.0E-06 AAGGTCACAGT 11 V_SPI1_01_M01203 TRANSFAC + 38692889 38692905 7.0E-06 CAGAAGGGGAAGTGCAG 17 V_AR_02_M00953 TRANSFAC + 38686168 38686194 1.0E-05 TAAAAAGACACGGTATGTTCTAGGCCC 27 V_MAX_Q6_M01830 TRANSFAC + 38692921 38692932 1.0E-05 CAACCCACGTGC 12 V_MMEF2_Q6_M00405 TRANSFAC + 38686210 38686225 3.0E-06 GTGTCTAAAAATAGTC 16 V_MMEF2_Q6_M00405 TRANSFAC - 38688670 38688685 7.0E-06 GTTACTAAAAATAGCT 16 V_GABP_B_M00341 TRANSFAC + 38692893 38692904 8.0E-06 AGGGGAAGTGCA 12 V_SP1_Q6_01_M00931 TRANSFAC + 38691221 38691230 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 38691233 38691242 7.0E-06 GGGGCGGGGT 10 V_MEF2_02_M00231 TRANSFAC + 38686207 38686228 0.0E+00 GTTGTGTCTAAAAATAGTCTCA 22 V_MEF2_02_M00231 TRANSFAC - 38688667 38688688 0.0E+00 AATGTTACTAAAAATAGCTAAC 22 V_HNF3_Q6_01_M01012 TRANSFAC - 38687126 38687143 3.0E-06 GTTACTGTTTGTTCAGGG 18 V_SP1_03_M02281 TRANSFAC - 38691220 38691229 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 38691232 38691241 7.0E-06 CCCCGCCCCC 10 V_NKX24_01_M01350 TRANSFAC + 38687408 38687423 6.0E-06 CAACCCACTCCAAACT 16 V_SP1_02_M01303 TRANSFAC + 38691221 38691231 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 38691233 38691243 8.0E-06 GGGGCGGGGTC 11 V_PU1_Q4_M01172 TRANSFAC - 38692890 38692908 1.0E-06 TGCCTGCACTTCCCCTTCT 19 V_MEF2A_Q6_M02024 TRANSFAC - 38686213 38686222 0.0E+00 TATTTTTAGA 10 V_MEF2A_Q6_M02024 TRANSFAC + 38688673 38688682 4.0E-06 TATTTTTAGT 10 V_CDP_04_M01344 TRANSFAC - 38686156 38686170 2.0E-06 TTAAGATGATCAATA 8 V_TGIF2_01_M01407 TRANSFAC + 38687356 38687371 3.0E-06 AAAGAGCTGTCTATAC 16 V_MYC_01_M02250 TRANSFAC + 38691323 38691332 7.0E-06 CGCACGTGGT 10 V_GLI3_02_M01704 TRANSFAC + 38692817 38692827 7.0E-06 GACCACACAGG 11 V_GC_01_M00255 TRANSFAC + 38691219 38691232 3.0E-06 TGGGGGCGGGGTCG 14 V_MEIS2_01_M01488 TRANSFAC + 38687356 38687371 4.0E-06 AAAGAGCTGTCTATAC 16 V_SPI1_03_M02078 TRANSFAC + 38692893 38692902 1.0E-05 AGGGGAAGTG 10 V_BEL1_B_M00312 TRANSFAC - 38692894 38692921 3.0E-06 GAAACGTTGACACTGCCTGCACTTCCCC 28 V_HNF3G_Q4_M02015 TRANSFAC - 38687131 38687138 7.0E-06 TGTTTGTT 8 V_KROX_Q6_M00982 TRANSFAC - 38691215 38691228 1.0E-05 CCCGCCCCCAGCCC 14 V_KROX_Q6_M00982 TRANSFAC - 38691227 38691240 1.0E-06 CCCGCCCCCGACCC 14 V_RSRFC4_Q2_M00407 TRANSFAC + 38686211 38686227 1.0E-06 TGTCTAAAAATAGTCTC 17 V_RSRFC4_Q2_M00407 TRANSFAC - 38688668 38688684 0.0E+00 TTACTAAAAATAGCTAA 17 V_AMEF2_Q6_M00403 TRANSFAC + 38686210 38686227 0.0E+00 GTGTCTAAAAATAGTCTC 18 V_AMEF2_Q6_M00403 TRANSFAC - 38688668 38688685 0.0E+00 GTTACTAAAAATAGCTAA 18 V_SP1_Q6_M00196 TRANSFAC + 38691219 38691231 2.0E-06 TGGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC + 38691231 38691243 3.0E-06 CGGGGGCGGGGTC 13 V_AP2BETA_Q3_M01858 TRANSFAC + 38691210 38691225 4.0E-06 GGCTCGGGCTGGGGGC 16 V_HNF3_Q6_M00791 TRANSFAC + 38687128 38687140 1.0E-06 CTGAACAAACAGT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 38687128 38687138 5.0E-06 TGTTTGTTCAG 11 V_NKX25_Q5_M01043 TRANSFAC + 38688320 38688329 3.0E-06 TGTCACTTGA 10 V_MEF2_03_M00232 TRANSFAC + 38686207 38686228 0.0E+00 GTTGTGTCTAAAAATAGTCTCA 22 V_MEF2_03_M00232 TRANSFAC - 38688667 38688688 0.0E+00 AATGTTACTAAAAATAGCTAAC 22 V_CLOX_01_M00103 TRANSFAC + 38686154 38686168 1.0E-06 CATATTGATCATCTT 6 V_CUX1_04_M02959 TRANSFAC - 38686156 38686170 2.0E-06 TTAAGATGATCAATA 8 V_HBP1_03_M02762 TRANSFAC - 38687442 38687457 2.0E-06 TGAATGAATGAGTGAC 16 V_HBP1_03_M02762 TRANSFAC - 38687446 38687461 0.0E+00 TGAATGAATGAATGAG 16 V_HBP1_03_M02762 TRANSFAC - 38687450 38687465 0.0E+00 TTGTTGAATGAATGAA 16 V_MEF2_04_M00233 TRANSFAC + 38686207 38686228 0.0E+00 GTTGTGTCTAAAAATAGTCTCA 22 V_MEF2_04_M00233 TRANSFAC - 38688667 38688688 0.0E+00 AATGTTACTAAAAATAGCTAAC 22 V_DAX1_01_M01248 TRANSFAC - 38688737 38688756 0.0E+00 TAAAGCCAAGGTCACAGTCA 20 V_KLF7_03_M02773 TRANSFAC - 38691218 38691233 6.0E-06 CCGACCCCGCCCCCAG 16 V_MEF2_Q6_01_M00941 TRANSFAC + 38688670 38688681 0.0E+00 AGCTATTTTTAG 12 V_CDP_02_M00102 TRANSFAC + 38686154 38686168 3.0E-06 CATATTGATCATCTT 6 V_BRACH_01_M00150 TRANSFAC - 38692945 38692968 1.0E-05 CTCCTGCCTGGTAGGTGTGACTCT 24 V_SP1_01_M00008 TRANSFAC + 38691221 38691230 3.0E-06 GGGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC + 38691233 38691242 3.0E-06 GGGGCGGGGT 10 V_GATA4_Q3_M00632 TRANSFAC - 38687312 38687323 0.0E+00 AGATAGAAGGGA 12 V_TFIII_Q6_M00706 TRANSFAC - 38687328 38687336 6.0E-06 AGAGGGAGG 9 V_GLI3_01_M01596 TRANSFAC - 38692816 38692826 7.0E-06 CTGTGTGGTCC 11 V_ELF1_Q6_M00746 TRANSFAC + 38692890 38692901 1.0E-05 AGAAGGGGAAGT 12 V_MRG2_01_M01395 TRANSFAC + 38687356 38687371 6.0E-06 AAAGAGCTGTCTATAC 16 V_TAL1_01_M01591 TRANSFAC - 38688329 38688341 0.0E+00 CTTCCTTCTCTGT 13 V_ERR2_01_M01589 TRANSFAC + 38687521 38687532 5.0E-06 CCAAGGTCACCA 12 V_ERR2_01_M01589 TRANSFAC - 38688740 38688751 3.0E-06 CCAAGGTCACAG 12 V_OSR2_03_M02785 TRANSFAC + 38692968 38692983 4.0E-06 GAGTACAGTAGCAGGA 16 V_ZBTB12_03_M02824 TRANSFAC + 38686179 38686195 6.0E-06 GGTATGTTCTAGGCCCA 17 V_TBX15_02_M01264 TRANSFAC + 38688499 38688516 4.0E-06 AAATGTGACGGTGTGCAA 18 V_RSRFC4_01_M00026 TRANSFAC + 38686211 38686226 8.0E-06 TGTCTAAAAATAGTCT 16 V_RSRFC4_01_M00026 TRANSFAC - 38686211 38686226 0.0E+00 AGACTATTTTTAGACA 16 V_RSRFC4_01_M00026 TRANSFAC + 38688669 38688684 1.0E-06 TAGCTATTTTTAGTAA 16 V_RSRFC4_01_M00026 TRANSFAC - 38688669 38688684 8.0E-06 TTACTAAAAATAGCTA 16 V_ESRRA_03_M02748 TRANSFAC - 38688738 38688754 3.0E-06 AAGCCAAGGTCACAGTC 17 V_ZFP281_01_M01597 TRANSFAC + 38691219 38691229 6.0E-06 TGGGGGCGGGG 11 V_BBX_03_M02739 TRANSFAC + 38687451 38687465 5.0E-06 TCATTCATTCAACAA 15 V_PBX_Q3_M00998 TRANSFAC - 38687338 38687349 5.0E-06 GTTTGATGGTTG 12 V_ERR1_Q2_01_M02093 TRANSFAC + 38687522 38687532 7.0E-06 CAAGGTCACCA 11 V_SATB1_01_M01232 TRANSFAC + 38688676 38688687 5.0E-06 TTTTAGTAACAT 12 V_PR_02_M00957 TRANSFAC + 38686168 38686194 5.0E-06 TAAAAAGACACGGTATGTTCTAGGCCC 27 V_MEF2_01_M00006 TRANSFAC + 38686212 38686227 3.0E-06 GTCTAAAAATAGTCTC 16 V_SP1_Q2_01_M00933 TRANSFAC - 38691220 38691229 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 38691232 38691241 4.0E-06 CCCCGCCCCC 10 V_MEF2A_05_M01301 TRANSFAC + 38688670 38688681 0.0E+00 AGCTATTTTTAG 12 V_HMEF2_Q6_M00406 TRANSFAC + 38686212 38686227 1.0E-05 GTCTAAAAATAGTCTC 16 V_HMEF2_Q6_M00406 TRANSFAC - 38688668 38688683 3.0E-06 TACTAAAAATAGCTAA 16 V_AP2ALPHA_03_M01047 TRANSFAC + 38686245 38686259 4.0E-06 CCAGCCTGAGGCGAG 15 V_AP2ALPHA_03_M01047 TRANSFAC - 38686245 38686259 4.0E-06 CTCGCCTCAGGCTGG 15 V_TCFAP2E_03_M02822 TRANSFAC + 38686245 38686259 6.0E-06 CCAGCCTGAGGCGAG 15 V_SP1_Q4_01_M00932 TRANSFAC + 38691219 38691231 5.0E-06 TGGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC + 38691231 38691243 5.0E-06 CGGGGGCGGGGTC 13 V_GLIS2_04_M02863 TRANSFAC - 38688675 38688688 2.0E-06 AATGTTACTAAAAA 14

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