Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DOCK6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57572 dedicator of cytokinesis 6 chr19 - 11372668 - 11378168 11373168 Transcription Factor Binding Sites   Download all TFBS in the DOCK6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MESP1_bHLH_DBD_dimeric_10_1 SELEX + 11375485 11375494 7.0E-06 AACACCTGCA 10 Pax5_MA0014.1 JASPAR - 11375452 11375471 6.0E-06 TGGCCACTGATGCAGGAACA 20 PAX6_PAX_DBD_monomeric_19_1 SELEX + 11375453 11375471 8.0E-06 GTTCCTGCATCAGTGGCCA 19 IRF7_IRF_DBD_dimeric_14_1 SELEX + 11368767 11368780 1.0E-06 TCCAAAGTGAAACT 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 11372805 11372815 7.0E-06 GACACACCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 11373212 11373222 1.0E-05 GCCCCGCCCCC 11 IRF8_IRF_full_dimeric_14_1 SELEX + 11368767 11368780 5.0E-06 TCCAAAGTGAAACT 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 11375350 11375363 1.0E-06 AATATGCAGATGAG 14 NFKB1_MA0105.1 JASPAR + 11375123 11375133 5.0E-06 GGGGAACCCCC 11 NFKB1_MA0105.1 JASPAR - 11375123 11375133 2.0E-06 GGGGGTTCCCC 11 Pax4_MA0068.1 JASPAR + 11368673 11368702 0.0E+00 GAAAATATGCCAATCCAGCAATTCTACTCC 30 Klf4_MA0039.2 JASPAR + 11376591 11376600 2.0E-06 TGGGTGTGGC 10 Spz1_MA0111.1 JASPAR + 11375547 11375557 6.0E-06 AGGGTAAAAGC 11 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 11375122 11375134 5.0E-06 AGGGGAACCCCCA 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 11375122 11375134 4.0E-06 TGGGGGTTCCCCT 13 IRF1_MA0050.1 JASPAR + 11368769 11368780 1.0E-06 CAAAGTGAAACT 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 11368745 11368756 9.0E-06 TCAGAGGTGTCA 12 ETV2_ETS_DBD_monomeric_11_1 SELEX - 11375409 11375419 1.0E-05 GACCGGATATA 11 POU3F3_POU_DBD_monomeric_13_1 SELEX + 11375350 11375362 5.0E-06 AATATGCAGATGA 13 TCF4_bHLH_full_dimeric_10_1 SELEX + 11375485 11375494 5.0E-06 AACACCTGCA 10 ETS1_ETS_full_monomeric_10_1 SELEX - 11375409 11375418 9.0E-06 ACCGGATATA 10 SP1_MA0079.2 JASPAR - 11373212 11373221 7.0E-06 CCCCGCCCCC 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 11376646 11376661 7.0E-06 GAGGCCAAAGTCCCCG 16 NFIX_NFI_full_monomeric_9_2 SELEX + 11368678 11368686 8.0E-06 TATGCCAAT 9 ETV4_ETS_DBD_monomeric_10_1 SELEX - 11375409 11375418 7.0E-06 ACCGGATATA 10 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 11368653 11368669 1.0E-05 TGTGATTATTAAGCAAG 17 MAFK_bZIP_full_dimeric_15_1 SELEX + 11368654 11368668 7.0E-06 GTGATTATTAAGCAA 15 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 11375122 11375134 2.0E-06 AGGGGAACCCCCA 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 11375122 11375134 2.0E-06 TGGGGGTTCCCCT 13 IRF9_IRF_full_trimeric_15_1 SELEX + 11368766 11368780 7.0E-06 CTCCAAAGTGAAACT 15 FEV_MA0156.1 JASPAR + 11375345 11375352 1.0E-05 CAGGAAAT 8 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 11375212 11375225 3.0E-06 TGTGCACACAGCCC 14 HNF4A_MA0114.1 JASPAR - 11376648 11376660 8.0E-06 AGGCCAAAGTCCC 13 POU2F1_POU_DBD_monomeric_12_1 SELEX + 11375350 11375361 6.0E-06 AATATGCAGATG 12 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 11372490 11372499 1.0E-05 GCCCCCCCAC 10 POU3F3_POU_DBD_dimeric_12_1 SELEX + 11368657 11368668 4.0E-06 ATTATTAAGCAA 12 TCF3_bHLH_DBD_dimeric_10_1 SELEX + 11375485 11375494 3.0E-06 AACACCTGCA 10 IRF2_MA0051.1 JASPAR + 11368768 11368785 6.0E-06 CCAAAGTGAAACTCACAT 18 V_MTF1_01_M01242 TRANSFAC + 11376676 11376695 3.0E-06 GTGGAGAACACGTTGCGGAC 20 V_TGIF_01_M00418 TRANSFAC - 11368757 11368767 2.0E-06 AGCTGTCATGA 11 V_MEIS1_02_M01419 TRANSFAC - 11368756 11368771 3.0E-06 TTGGAGCTGTCATGAT 16 V_ZSCAN4_03_M02838 TRANSFAC + 11375208 11375224 2.0E-06 GACATGTGCACACAGCC 17 V_GABPA_02_M02074 TRANSFAC - 11375409 11375418 4.0E-06 ACCGGATATA 10 V_MAX_Q6_M01830 TRANSFAC + 11375220 11375231 8.0E-06 CAGCCCACGTGC 12 V_NF1_Q6_01_M00806 TRANSFAC + 11368671 11368687 5.0E-06 TTGAAAATATGCCAATC 17 V_MTF1_Q4_M00650 TRANSFAC + 11375212 11375225 0.0E+00 TGTGCACACAGCCC 14 V_ETS_B_M00340 TRANSFAC + 11375343 11375356 7.0E-06 GGCAGGAAATATGC 14 V_TCF4_Q5_01_M02033 TRANSFAC + 11376483 11376492 7.0E-06 ATCAAAGGCC 10 V_SP1_Q6_01_M00931 TRANSFAC + 11373191 11373200 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 11373196 11373205 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 11373213 11373222 4.0E-06 GGGGCGGGGC 10 V_EOMES_03_M02747 TRANSFAC - 11368740 11368756 8.0E-06 TCAGAGGTGTCAACATT 17 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 11376612 11376625 8.0E-06 TGACAGCTGATCAA 14 V_IRF2_Q6_M01882 TRANSFAC + 11368767 11368782 2.0E-06 TCCAAAGTGAAACTCA 16 V_CEBP_Q2_M00190 TRANSFAC - 11368658 11368671 5.0E-06 ACCTTGCTTAATAA 14 V_SP1_03_M02281 TRANSFAC - 11373212 11373221 7.0E-06 CCCCGCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 11376648 11376660 8.0E-06 AGGCCAAAGTCCC 13 V_GKLF_02_M01588 TRANSFAC - 11376589 11376600 0.0E+00 GCCACACCCAGC 12 V_AP4_Q6_02_M01860 TRANSFAC - 11372499 11372511 6.0E-06 ACAGCTGTGGACG 13 V_CETS2_02_M02064 TRANSFAC - 11375409 11375418 3.0E-06 ACCGGATATA 10 V_PDEF_02_M02075 TRANSFAC - 11375409 11375418 1.0E-06 ACCGGATATA 10 V_CP2_02_M00947 TRANSFAC + 11376589 11376603 9.0E-06 GCTGGGTGTGGCTGG 15 V_CRX_Q4_M00623 TRANSFAC - 11368652 11368664 8.0E-06 TTAATAATCACAG 13 V_MEIS2_01_M01488 TRANSFAC - 11368756 11368771 3.0E-06 TTGGAGCTGTCATGAT 16 V_ELK1_05_M01981 TRANSFAC - 11375409 11375418 5.0E-06 ACCGGATATA 10 V_TGIF_02_M01346 TRANSFAC + 11368755 11368771 5.0E-06 GATCATGACAGCTCCAA 17 V_CEBPE_Q6_M01868 TRANSFAC - 11368660 11368673 9.0E-06 CAACCTTGCTTAAT 14 V_SAP1A_02_M01983 TRANSFAC - 11375409 11375418 6.0E-06 ACCGGATATA 10 V_FLI1_02_M02073 TRANSFAC - 11375409 11375418 7.0E-06 ACCGGATATA 10 V_PET1_02_M02072 TRANSFAC - 11375409 11375418 3.0E-06 ACCGGATATA 10 V_IRF2_01_M00063 TRANSFAC + 11368768 11368780 7.0E-06 CCAAAGTGAAACT 13 V_KROX_Q6_M00982 TRANSFAC + 11372410 11372423 1.0E-05 CCAGCCCCCACTCC 14 V_KROX_Q6_M00982 TRANSFAC - 11373207 11373220 1.0E-06 CCCGCCCCCGCGCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 11375438 11375447 6.0E-06 TCCTCCCCCC 10 V_SP1_Q6_M00196 TRANSFAC + 11373194 11373206 4.0E-06 GCGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 11373211 11373223 1.0E-06 CGGGGGCGGGGCC 13 V_IRF3_Q3_M01279 TRANSFAC - 11368770 11368782 1.0E-06 TGAGTTTCACTTT 13 V_EGR1_Q6_M01873 TRANSFAC + 11373210 11373219 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC - 11368769 11368783 6.0E-06 GTGAGTTTCACTTTG 15 V_CETS2_01_M01989 TRANSFAC - 11375409 11375418 9.0E-06 ACCGGATATA 10 V_OCT1_04_M00138 TRANSFAC + 11368671 11368693 1.0E-05 TTGAAAATATGCCAATCCAGCAA 23 V_PET1_01_M02037 TRANSFAC - 11375409 11375418 7.0E-06 ACCGGATATA 10 V_MAFK_Q3_M02022 TRANSFAC + 11376582 11376592 6.0E-06 TGACTCAGCTG 11 V_ISGF3G_03_M02771 TRANSFAC + 11368768 11368782 6.0E-06 CCAAAGTGAAACTCA 15 V_SMAD4_Q6_M00733 TRANSFAC + 11375241 11375255 6.0E-06 GTGGTCCAGCCACTT 15 V_TGIF1_01_M03111 TRANSFAC + 11368755 11368771 5.0E-06 GATCATGACAGCTCCAA 17 V_ERF_02_M02061 TRANSFAC - 11375409 11375418 8.0E-06 ACCGGATATA 10 V_IK3_01_M00088 TRANSFAC + 11375478 11375490 3.0E-06 GCCTGGGAACACC 13 V_ER71_01_M01988 TRANSFAC - 11375409 11375418 7.0E-06 ACCGGATATA 10 V_NET_01_M01982 TRANSFAC - 11375409 11375418 6.0E-06 ACCGGATATA 10 V_MAF_Q6_01_M00983 TRANSFAC - 11376581 11376591 5.0E-06 AGCTGAGTCAG 11 V_KAISO_01_M01119 TRANSFAC + 11375162 11375171 6.0E-06 ATCCTGCTAG 10 V_ER81_01_M01987 TRANSFAC - 11375409 11375418 8.0E-06 ACCGGATATA 10 V_SP4_Q5_M01273 TRANSFAC - 11373190 11373200 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 11373195 11373205 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 11373212 11373222 1.0E-06 GCCCCGCCCCC 11 V_ERM_02_M02069 TRANSFAC - 11375409 11375418 9.0E-06 ACCGGATATA 10 V_MYOD_Q6_02_M02100 TRANSFAC - 11376612 11376620 4.0E-06 CAGCTGTCA 9 V_MYF6_04_M02885 TRANSFAC - 11376547 11376561 5.0E-06 AGAAATAGCCTCACC 15 V_PDEF_01_M02040 TRANSFAC - 11375409 11375418 1.0E-06 ACCGGATATA 10 V_OCT1_Q6_M00195 TRANSFAC + 11375349 11375363 1.0E-05 AAATATGCAGATGAG 15 V_CPHX_01_M01478 TRANSFAC + 11376475 11376488 1.0E-05 TTGCTCCAATCAAA 14 V_NRF2_Q4_M00821 TRANSFAC - 11376580 11376592 4.0E-06 CAGCTGAGTCAGG 13 V_E47_01_M00002 TRANSFAC - 11375482 11375496 2.0E-06 GATGCAGGTGTTCCC 15 V_SIX4_01_M01374 TRANSFAC + 11368740 11368756 6.0E-06 AATGTTGACACCTCTGA 17 V_EGR1_06_M02744 TRANSFAC - 11373207 11373220 9.0E-06 CCCGCCCCCGCGCC 14 V_IRF1_Q6_01_M01881 TRANSFAC - 11368768 11368781 8.0E-06 GAGTTTCACTTTGG 14 V_DMRT2_01_M01147 TRANSFAC + 11376471 11376486 4.0E-06 GAGATTGCTCCAATCA 16 V_PBX_Q3_M00998 TRANSFAC - 11372424 11372435 7.0E-06 GATTGAATGGAG 12 V_PBX_Q3_M00998 TRANSFAC - 11372435 11372446 9.0E-06 GATGGATGGGTG 12 V_NFE2_Q6_M02104 TRANSFAC + 11376580 11376595 5.0E-06 CCTGACTCAGCTGGGT 16 V_EKLF_Q5_M01874 TRANSFAC - 11376590 11376599 5.0E-06 CCACACCCAG 10 V_HNF3B_Q6_M02014 TRANSFAC + 11376294 11376302 6.0E-06 TTGTTTGCT 9 V_IRF1_01_M00062 TRANSFAC + 11368768 11368780 1.0E-05 CCAAAGTGAAACT 13 V_SP1_Q2_01_M00933 TRANSFAC - 11373212 11373221 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 11373194 11373206 6.0E-06 GCGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 11373211 11373223 1.0E-06 CGGGGGCGGGGCC 13 V_FEV_01_M02269 TRANSFAC + 11375345 11375352 1.0E-05 CAGGAAAT 8 V_ER71_02_M02067 TRANSFAC - 11375409 11375418 8.0E-06 ACCGGATATA 10 V_PAX4_04_M00380 TRANSFAC + 11368673 11368702 3.0E-06 GAAAATATGCCAATCCAGCAATTCTACTCC 30 V_SOX9_Q4_M01284 TRANSFAC + 11376482 11376492 9.0E-06 AATCAAAGGCC 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.