Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PRPS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5631 phosphoribosyl pyrophosphate synthetase 1 chrX + 106866653 - 106872153 106871653 Transcription Factor Binding Sites   Download all TFBS in the PRPS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints IRF7_IRF_DBD_dimeric_14_1 SELEX - 106875676 106875689 8.0E-06 CCAAAAGTGAATCT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 106871271 106871287 7.0E-06 GAATTAAAACACTTTTA 17 ZNF713_C2H2_full_monomeric_17_1 SELEX - 106871336 106871352 1.0E-05 AGGATGACAGCCACGAG 17 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 106871911 106871922 4.0E-06 AAATTGCTGACC 12 TBX19_TBX_DBD_dimeric_20_1 SELEX + 106868694 106868713 4.0E-06 TCTTGCAGTTAGGTGCGAAT 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 106868694 106868713 5.0E-06 ATTCGCACCTAACTGCAAGA 20 NFIX_NFI_full_dimeric_15_2 SELEX + 106875826 106875840 7.0E-06 TTGGCCCAAAGCCAT 15 IRF7_IRF_DBD_trimeric_17_1 SELEX - 106871356 106871372 6.0E-06 TTTAAGAAAATCTGTTT 17 T_MA0009.1 JASPAR + 106868702 106868712 9.0E-06 TTAGGTGCGAA 11 YY2_C2H2_full_monomeric_11_1 SELEX - 106871745 106871755 2.0E-06 TCCGCCATCTT 11 Gata1_MA0035.2 JASPAR + 106871304 106871314 3.0E-06 AGAGATAAAAA 11 NRL_bZIP_DBD_monomeric_11_1 SELEX + 106871911 106871921 0.0E+00 AAATTGCTGAC 11 VENTX_homeodomain_DBD_monomeric_9_1 SELEX - 106871656 106871664 5.0E-06 AACGATTAG 9 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 106875699 106875706 1.0E-05 ACATTCCA 8 IRF9_IRF_full_trimeric_15_1 SELEX - 106875676 106875690 1.0E-05 ACCAAAAGTGAATCT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 106871132 106871146 4.0E-06 TGCAAGAGAAAGTTG 15 Hltf_MA0109.1 JASPAR + 106871294 106871303 1.0E-05 ATCCTTATAA 10 TFAP4_bHLH_full_dimeric_10_1 SELEX + 106875809 106875818 9.0E-06 AACAGCTGAG 10 E2F1_E2F_DBD_monomeric_14_2 SELEX - 106872585 106872598 1.0E-06 TTATGGCTCCAATT 14 CPEB1_RRM_full_monomeric_8_1 SELEX + 106871423 106871430 4.0E-06 AATAAAAA 8 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 106875698 106875707 8.0E-06 GACATTCCAT 10 MAFK_bZIP_full_monomeric_12_1 SELEX + 106871910 106871921 0.0E+00 AAAATTGCTGAC 12 IRF3_IRF_full_trimeric_21_1 SELEX + 106875733 106875753 3.0E-06 CCTTAAAGGAAAGGGAAAAGA 21 TBX1_TBX_DBD_dimeric_20_1 SELEX + 106868736 106868755 8.0E-06 GGATGTGAGAGAAAGTGGGA 20 E2F3_E2F_DBD_dimeric_18_3 SELEX + 106872583 106872600 8.0E-06 GTAATTGGAGCCATAAAT 18 IRF2_MA0051.1 JASPAR - 106875671 106875688 4.0E-06 CAAAAGTGAATCTAAAAG 18 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 106871354 106871367 5.0E-06 GAAAATCTGTTTAT 14 V_RUSH1A_02_M01107 TRANSFAC + 106871294 106871303 1.0E-05 ATCCTTATAA 10 V_HOXA9_01_M01351 TRANSFAC + 106872589 106872605 2.0E-06 GGAGCCATAAATCTAGT 17 V_AREB6_01_M00412 TRANSFAC + 106872572 106872584 1.0E-05 CATCTACCTGAGT 13 V_GATA1_Q6_M02004 TRANSFAC + 106871301 106871315 9.0E-06 TAAAGAGATAAAAAA 15 V_MAFK_03_M02776 TRANSFAC + 106871909 106871923 1.0E-06 GAAAATTGCTGACCG 15 V_GATA2_02_M00348 TRANSFAC + 106871304 106871313 5.0E-06 AGAGATAAAA 10 V_HMGIY_Q3_M01010 TRANSFAC - 106871906 106871920 3.0E-06 TCAGCAATTTTCTGA 15 V_STAT_Q6_M00777 TRANSFAC - 106871904 106871916 5.0E-06 CAATTTTCTGAGA 13 V_HOXA13_02_M01297 TRANSFAC + 106871422 106871430 4.0E-06 AAATAAAAA 9 V_EBOX_Q6_01_M01034 TRANSFAC - 106872303 106872312 8.0E-06 CCACGTGTCC 10 V_ISL2_01_M01328 TRANSFAC + 106875847 106875862 7.0E-06 AACACTCCATTAACTA 16 V_IRF_Q6_01_M00972 TRANSFAC - 106875677 106875687 8.0E-06 AAAAGTGAATC 11 V_IRF2_Q6_M01882 TRANSFAC - 106875674 106875689 5.0E-06 CCAAAAGTGAATCTAA 16 V_AP4_Q6_M00176 TRANSFAC - 106875809 106875818 8.0E-06 CTCAGCTGTT 10 V_SOX11_04_M02899 TRANSFAC + 106872515 106872528 5.0E-06 AAAATTATTACGAC 14 V_GATA_C_M00203 TRANSFAC + 106871306 106871316 7.0E-06 AGATAAAAAAT 11 V_GATA_C_M00203 TRANSFAC - 106871896 106871906 1.0E-06 AGATAAGTCCT 11 V_PU1_Q4_M01172 TRANSFAC - 106871414 106871432 7.0E-06 CTTTTTTATTTCCCCTCCC 19 V_NFY_Q6_01_M00775 TRANSFAC - 106875823 106875835 8.0E-06 TTTGGGCCAATCA 13 V_NFAT2_01_M01748 TRANSFAC - 106872903 106872911 3.0E-06 ATGGAAAAA 9 V_NKX62_Q2_M00489 TRANSFAC - 106872514 106872525 7.0E-06 GTAATAATTTTG 12 V_TST1_01_M00133 TRANSFAC - 106871276 106871290 6.0E-06 GCTGAATTAAAACAC 15 V_HMBOX1_01_M01456 TRANSFAC + 106872596 106872612 5.0E-06 TAAATCTAGTTGATTTG 17 V_GC_01_M00255 TRANSFAC - 106871630 106871643 9.0E-06 GAAGGGCGGGGTTT 14 V_RFXDC2_04_M02894 TRANSFAC + 106872986 106873002 2.0E-06 TGACTTGGTTACCTGAT 17 V_OCT1_03_M00137 TRANSFAC - 106872516 106872528 6.0E-06 GTCGTAATAATTT 13 V_TBX18_01_M01262 TRANSFAC + 106871672 106871690 5.0E-06 GGGTGTGGACTTCGCCGCT 19 V_NFAT_Q6_M00302 TRANSFAC - 106872902 106872913 2.0E-06 CAATGGAAAAAA 12 V_SOX7_04_M02911 TRANSFAC + 106868706 106868727 1.0E-06 GTGCGAATTGTGACTGAGCTCT 22 V_RFX1_01_M00280 TRANSFAC - 106872991 106873007 9.0E-06 AAATAATCAGGTAACCA 17 V_IRF2_01_M00063 TRANSFAC - 106875676 106875688 7.0E-06 CAAAAGTGAATCT 13 V_AMEF2_Q6_M00403 TRANSFAC - 106871708 106871725 5.0E-06 GGCTCTAAATTACCCAAA 18 V_HOXB9_01_M01426 TRANSFAC + 106872589 106872604 3.0E-06 GGAGCCATAAATCTAG 16 V_IRF3_Q3_M01279 TRANSFAC - 106875742 106875754 1.0E-06 CTCTTTTCCCTTT 13 V_CDX2_01_M01449 TRANSFAC + 106872588 106872603 5.0E-06 TGGAGCCATAAATCTA 16 V_IRC900814_04_M02870 TRANSFAC - 106872520 106872535 1.0E-06 AAGGGAAGTCGTAATA 16 V_IRF_Q6_M00772 TRANSFAC + 106875673 106875687 2.0E-06 TTTAGATTCACTTTT 15 V_CDX2_Q5_M00729 TRANSFAC - 106872591 106872604 7.0E-06 CTAGATTTATGGCT 14 V_ISRE_01_M00258 TRANSFAC - 106875746 106875760 7.0E-06 TAGCTTCTCTTTTCC 15 V_YY1_Q6_02_M01035 TRANSFAC - 106871745 106871755 7.0E-06 TCCGCCATCTT 11 V_CDX1_01_M01373 TRANSFAC + 106872588 106872603 9.0E-06 TGGAGCCATAAATCTA 16 V_REX1_03_M01744 TRANSFAC + 106871745 106871756 6.0E-06 AAGATGGCGGAG 12 V_AP4_Q5_M00175 TRANSFAC - 106875809 106875818 3.0E-06 CTCAGCTGTT 10 V_GATA1_09_M02254 TRANSFAC + 106871304 106871314 3.0E-06 AGAGATAAAAA 11 V_KLF7_03_M02773 TRANSFAC + 106871629 106871644 9.0E-06 CAAACCCCGCCCTTCG 16 V_HNF4A_Q6_01_M02016 TRANSFAC - 106875537 106875551 2.0E-06 AACCAAAGTTCAAGT 15 V_STAT4_Q5_M02117 TRANSFAC + 106871368 106871377 2.0E-06 TTAAAGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC + 106875735 106875744 2.0E-06 TTAAAGGAAA 10 V_ARID3A_04_M02735 TRANSFAC - 106871276 106871292 8.0E-06 GGGCTGAATTAAAACAC 17 V_BRACH_01_M00150 TRANSFAC + 106868692 106868715 1.0E-06 TTTCTTGCAGTTAGGTGCGAATTG 24 V_NR1B1_Q6_M02110 TRANSFAC - 106875538 106875547 9.0E-06 AAAGTTCAAG 10 V_MZF1_02_M00084 TRANSFAC + 106871412 106871424 8.0E-06 GAGGGAGGGGAAA 13 V_BLIMP1_Q6_M01066 TRANSFAC - 106875674 106875689 2.0E-06 CCAAAAGTGAATCTAA 16 V_GCNF_01_M00526 TRANSFAC + 106872147 106872164 7.0E-06 GGGAGGGTCACGTTCATT 18 V_ALPHACP1_01_M00687 TRANSFAC - 106875770 106875780 2.0E-06 TATCCAATGAG 11 V_AP3_Q6_M00690 TRANSFAC - 106871715 106871722 5.0E-06 TCTAAATT 8 V_AP3_Q6_M00690 TRANSFAC + 106875634 106875641 5.0E-06 TCTAAATT 8 V_CAAT_C_M00200 TRANSFAC + 106871627 106871651 6.0E-06 ACCAAACCCCGCCCTTCGCTCCCTC 25 V_GATA3_02_M00350 TRANSFAC + 106871304 106871313 2.0E-06 AGAGATAAAA 10 V_AIRE_01_M00999 TRANSFAC - 106875689 106875714 5.0E-06 AATTGAAATGGAATGTCAGGAAACAC 26 V_ZFP281_01_M01597 TRANSFAC + 106872072 106872082 9.0E-06 TGGGGGTTGGG 11 V_SRF_Q5_01_M00922 TRANSFAC + 106871296 106871310 1.0E-05 CCTTATAAAGAGATA 15 V_GATA2_03_M00349 TRANSFAC + 106871304 106871313 3.0E-06 AGAGATAAAA 10 V_SOX18_04_M02905 TRANSFAC - 106871277 106871292 2.0E-06 GGGCTGAATTAAAACA 16 V_YY1_01_M00059 TRANSFAC - 106872186 106872202 4.0E-06 ACACTCCATCTTTTGAC 17 V_IRF1_01_M00062 TRANSFAC - 106875676 106875688 1.0E-05 CAAAAGTGAATCT 13 V_CREB_02_M00113 TRANSFAC - 106871475 106871486 8.0E-06 CTGGTGACGTCT 12 V_CTF1_01_M01196 TRANSFAC - 106875826 106875839 7.0E-06 TGGCTTTGGGCCAA 14 V_CTF1_01_M01196 TRANSFAC + 106875827 106875840 6.0E-06 TGGCCCAAAGCCAT 14 V_GATA6_04_M02757 TRANSFAC + 106871301 106871317 1.0E-06 TAAAGAGATAAAAAATG 17 V_TCF3_05_M02920 TRANSFAC + 106871417 106871431 0.0E+00 AGGGGAAATAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 106871418 106871432 7.0E-06 GGGGAAATAAAAAAG 15 TLX1_NFIC_MA0119.1 JASPAR - 106875826 106875839 7.0E-06 TGGCTTTGGGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR + 106875827 106875840 6.0E-06 TGGCCCAAAGCCAT 14 V_SPI1_02_M02043 TRANSFAC + 106871417 106871426 8.0E-06 AGGGGAAATA 10 V_NF1_Q6_M00193 TRANSFAC - 106868718 106868735 7.0E-06 CTTTGGCAAGAGCTCAGT 18 V_GATA1_06_M00347 TRANSFAC + 106871304 106871313 8.0E-06 AGAGATAAAA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.