Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

VIMP


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55829 VCP-interacting membrane protein chr15 -101817200 - 101822700 101817700

Transcription Factor Binding Sites

 
Download all TFBS in the VIMP promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SP8_C2H2_DBD_monomeric_12_1 SELEX - 101817772 101817783 2.0E-06 GCCACGCCCCCC 12
SP3_C2H2_DBD_monomeric_11_1 SELEX - 101817773 101817783 3.0E-06 GCCACGCCCCC 11
SP3_C2H2_DBD_monomeric_11_1 SELEX - 101817786 101817796 1.0E-05 GCCACGCCCCT 11
ALX3_homeodomain_full_monomeric_10_1 SELEX - 101817938 101817947 8.0E-06 TCCAATTAGA 10
Pax6_MA0069.1 JASPAR - 101818550 101818563 2.0E-06 TTCACGCTTCATGT 14
SPIC_ETS_full_monomeric_14_1 SELEX - 101817922 101817935 1.0E-06 AAAAAAAGAAAGTA 14
FLI1_ETS_full_monomeric_10_1 SELEX - 101817673 101817682 1.0E-05 ACCGGAAGCG 10
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 101817773 101817783 1.0E-06 GCCACGCCCCC 11
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 101817786 101817796 7.0E-06 GCCACGCCCCT 11
ERG_ETS_full_monomeric_10_1 SELEX - 101817673 101817682 8.0E-06 ACCGGAAGCG 10
SOX2_HMG_full_dimeric_17_1 SELEX + 101813830 101813846 8.0E-06 TAAAAATAGCATTTTCT 17
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 101816928 101816938 5.0E-06 TGGAAAGGTCA 11
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 101813801 101813812 4.0E-06 TCTAAAAATAAG 12
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 101813828 101813839 2.0E-06 TTTAAAAATAGC 12
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 101817771 101817784 0.0E+00 GGCCACGCCCCCCT 14
IRF8_IRF_full_dimeric_14_1 SELEX + 101815437 101815450 8.0E-06 TTCAAACTGAAACC 14
HINFP1_C2H2_full_monomeric_12_1 SELEX + 101817405 101817416 4.0E-06 CAAGGTCCGCGT 12
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 101813801 101813812 2.0E-06 TCTAAAAATAAG 12
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 101813828 101813839 1.0E-06 TTTAAAAATAGC 12
KLF13_C2H2_full_monomeric_18_1 SELEX - 101817768 101817785 5.0E-06 CGGCCACGCCCCCCTGCG 18
IRF7_IRF_DBD_trimeric_17_1 SELEX - 101817910 101817926 5.0E-06 AAGTAGAAATTCGGTAA 17
MEF2B_MADS_full_dimeric_12_1 SELEX + 101813801 101813812 7.0E-06 TCTAAAAATAAG 12
MEF2B_MADS_full_dimeric_12_1 SELEX + 101813828 101813839 4.0E-06 TTTAAAAATAGC 12
IRF1_MA0050.1 JASPAR + 101815439 101815450 2.0E-06 CAAACTGAAACC 12
IRF1_MA0050.1 JASPAR - 101815461 101815472 5.0E-06 AAAACTGAAACA 12
Ar_MA0007.1 JASPAR - 101817841 101817862 8.0E-06 GATAGCACAGAACGTTCCCACA 22
MEF2A_MA0052.1 JASPAR - 101813802 101813811 2.0E-06 TTATTTTTAG 10
MEF2A_MA0052.1 JASPAR - 101813829 101813838 3.0E-06 CTATTTTTAA 10
ELK4_ETS_DBD_monomeric_10_1 SELEX - 101817673 101817682 1.0E-05 ACCGGAAGCG 10
SP4_C2H2_full_monomeric_17_1 SELEX - 101817770 101817786 2.0E-06 TCGGCCACGCCCCCCTG 17
NFATC1_NFAT_full_dimeric_20_1 SELEX + 101816884 101816903 5.0E-06 AAAAGAAAAACAGTTTTCAA 20
TFCP2_CP2_full_dimeric_10_1 SELEX + 101815446 101815455 6.0E-06 AAACCAGTTC 10
SP1_C2H2_DBD_monomeric_11_1 SELEX - 101817773 101817783 5.0E-06 GCCACGCCCCC 11
TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX + 101815448 101815463 6.0E-06 ACCAGTTCATACTTGT 16
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 101815429 101815443 9.0E-06 TGCACACATTCAAAC 15
Klf12_C2H2_DBD_monomeric_15_1 SELEX - 101817770 101817784 6.0E-06 GGCCACGCCCCCCTG 15
IRF9_IRF_full_trimeric_15_1 SELEX + 101815436 101815450 2.0E-06 ATTCAAACTGAAACC 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 101817921 101817935 9.0E-06 AAAAAAAGAAAGTAG 15
FOXI1_forkhead_full_dimeric_17_1 SELEX + 101818661 101818677 1.0E-06 GTGTGTTCAGAAAGCAA 17
IRF4_IRF_full_dimeric_15_1 SELEX + 101815437 101815451 3.0E-06 TTCAAACTGAAACCA 15
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 101816883 101816895 4.0E-06 GAAAAGAAAAACA 13
AR_nuclearreceptor_full_dimeric_17_1 SELEX + 101817844 101817860 1.0E-05 GGGAACGTTCTGTGCTA 17
RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 101816743 101816760 8.0E-06 AACCCACAGCAGCCGCAG 18
V_FOXP1_01_M00987 TRANSFAC + 101817915 101817934 8.0E-06 GAATTTCTACTTTCTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC + 101820748 101820767 3.0E-06 ATAATAGTGTTGTTGATTAA 20
V_CEBPG_Q6_M00622 TRANSFAC + 101813824 101813836 3.0E-06 ACCATTTAAAAAT 13
V_SAP1A_01_M01167 TRANSFAC - 101817673 101817683 7.0E-06 CACCGGAAGCG 11
V_E2A_Q6_01_M02088 TRANSFAC + 101818613 101818625 1.0E-06 GGACAGCTGCAGG 13
V_DBX1_01_M01483 TRANSFAC + 101816901 101816917 5.0E-06 CAAAAAACTAAAAATGA 17
V_TCF3_01_M01594 TRANSFAC + 101817923 101817935 6.0E-06 ACTTTCTTTTTTT 13
V_GATA1_Q6_M02004 TRANSFAC - 101820671 101820685 9.0E-06 GTCTCAGATAAGCCA 15
V_HMGIY_Q3_M01010 TRANSFAC - 101813828 101813842 8.0E-06 AATGCTATTTTTAAA 15
V_EVI1_04_M00081 TRANSFAC - 101817925 101817939 4.0E-06 GAAAAAAAAAAGAAA 15
V_MMEF2_Q6_M00405 TRANSFAC + 101813798 101813813 1.0E-06 GTGTCTAAAAATAAGC 16
V_ETV3_01_M01990 TRANSFAC - 101817673 101817682 9.0E-06 ACCGGAAGCG 10
V_SP1_Q6_01_M00931 TRANSFAC - 101817744 101817753 7.0E-06 GGGGCGGGGT 10
V_MEF2_02_M00231 TRANSFAC + 101813795 101813816 1.0E-06 TATGTGTCTAAAAATAAGCTTC 22
V_MEF2_02_M00231 TRANSFAC + 101813822 101813843 0.0E+00 GGACCATTTAAAAATAGCATTT 22
V_NR2F2_03_M02783 TRANSFAC - 101816924 101816939 4.0E-06 ATGGAAAGGTCAACTA 16
V_IRF_Q6_01_M00972 TRANSFAC - 101815462 101815472 1.0E-06 AAAACTGAAAC 11
V_IRF_Q6_01_M00972 TRANSFAC - 101817924 101817934 5.0E-06 AAAAAAGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 101815459 101815474 6.0E-06 GAAAAACTGAAACAAG 16
V_IRF2_Q6_M01882 TRANSFAC - 101817921 101817936 2.0E-06 AAAAAAAAGAAAGTAG 16
V_NFAT3_Q3_M01734 TRANSFAC + 101815467 101815476 6.0E-06 AGTTTTTCCT 10
V_GATA1_03_M00127 TRANSFAC + 101813899 101813912 1.0E-05 AAGGGGATTACAGC 14
V_AFP1_Q6_M00616 TRANSFAC + 101813831 101813841 1.0E-05 AAAAATAGCAT 11
V_SP1_02_M01303 TRANSFAC - 101817743 101817753 8.0E-06 GGGGCGGGGTC 11
V_PU1_Q4_M01172 TRANSFAC + 101815493 101815511 7.0E-06 CGCATTTAGTTCTTCTTGC 19
V_TCFAP2E_04_M02926 TRANSFAC - 101813841 101813854 9.0E-06 ATCTGGAAAGAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 101817928 101817941 6.0E-06 TAGAAAAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 101817929 101817942 2.0E-06 TTAGAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 101817930 101817943 8.0E-06 ATTAGAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 101817931 101817944 1.0E-06 AATTAGAAAAAAAA 14
V_MEF2A_Q6_M02024 TRANSFAC - 101813801 101813810 0.0E+00 TATTTTTAGA 10
V_MEF2A_Q6_M02024 TRANSFAC - 101813828 101813837 1.0E-06 TATTTTTAAA 10
V_LXRB_RXRA_Q5_M02021 TRANSFAC - 101818630 101818644 7.0E-06 TGAGGTCAGTGCTCA 15
V_BARBIE_01_M00238 TRANSFAC + 101816694 101816708 8.0E-06 ATATAAAGGAGGTGC 15
V_PAX5_02_M00144 TRANSFAC + 101818595 101818622 1.0E-06 CAAGAAGTTCCTCAAGGGGGACAGCTGC 28
V_ELF4_04_M02850 TRANSFAC + 101813799 101813815 1.0E-05 TGTCTAAAAATAAGCTT 17
V_ELF4_04_M02850 TRANSFAC + 101816898 101816914 4.0E-06 TTTCAAAAAACTAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 101817927 101817943 2.0E-06 ATTAGAAAAAAAAAAGA 17
V_FLI1_01_M02038 TRANSFAC - 101817673 101817682 7.0E-06 ACCGGAAGCG 10
V_GC_01_M00255 TRANSFAC - 101813026 101813039 1.0E-06 AGGAGGCGGAGCTT 14
V_MECP2_01_M01298 TRANSFAC + 101813816 101813830 5.0E-06 CCGGCAGGACCATTT 15
V_MECP2_01_M01298 TRANSFAC + 101817976 101817990 9.0E-06 CCGGAAGCAGGATTT 15
V_HELIOSA_02_M01004 TRANSFAC - 101815469 101815479 0.0E+00 ATAAGGAAAAA 11
V_ZFP105_03_M02827 TRANSFAC - 101817926 101817940 1.0E-06 AGAAAAAAAAAAGAA 15
V_ZFP105_03_M02827 TRANSFAC - 101817927 101817941 1.0E-05 TAGAAAAAAAAAAGA 15
V_BEL1_B_M00312 TRANSFAC + 101813885 101813912 5.0E-06 AGTCTTCTGACACAAAGGGGATTACAGC 28
V_SOX7_04_M02911 TRANSFAC - 101815408 101815429 2.0E-06 ATAGAAATTGTCTGAGGTTTAG 22
V_POLY_C_M00212 TRANSFAC + 101820762 101820779 1.0E-06 GATTAAAACCCCTGAGTT 18
V_SP4_03_M02810 TRANSFAC - 101817768 101817784 7.0E-06 GGCCACGCCCCCCTGCG 17
V_P53_03_M01651 TRANSFAC - 101815446 101815465 1.0E-05 AAACAAGTATGAACTGGTTT 20
V_RSRFC4_Q2_M00407 TRANSFAC + 101813799 101813815 2.0E-06 TGTCTAAAAATAAGCTT 17
V_RSRFC4_Q2_M00407 TRANSFAC + 101813826 101813842 0.0E+00 CATTTAAAAATAGCATT 17
V_AMEF2_Q6_M00403 TRANSFAC + 101813798 101813815 6.0E-06 GTGTCTAAAAATAAGCTT 18
V_ER81_02_M02065 TRANSFAC - 101817673 101817682 8.0E-06 ACCGGAAGCG 10
V_SP1_Q6_M00196 TRANSFAC - 101817743 101817755 5.0E-06 ACGGGGCGGGGTC 13
V_FOXK1_04_M02856 TRANSFAC + 101815548 101815562 0.0E+00 TTAACAACAACATCA 15
V_FOXK1_04_M02856 TRANSFAC - 101820752 101820766 8.0E-06 TAATCAACAACACTA 15
V_IRF_Q6_M00772 TRANSFAC + 101817920 101817934 0.0E+00 TCTACTTTCTTTTTT 15
V_TTF1_Q6_M00794 TRANSFAC + 101817033 101817044 8.0E-06 AACTCAAGAAGT 12
V_MEF2_03_M00232 TRANSFAC + 101813795 101813816 2.0E-06 TATGTGTCTAAAAATAAGCTTC 22
V_MEF2_03_M00232 TRANSFAC + 101813822 101813843 2.0E-06 GGACCATTTAAAAATAGCATTT 22
V_ASCL2_03_M02737 TRANSFAC + 101815520 101815536 3.0E-06 TCGAGCAGCTGCTAAAG 17
V_ELF5_01_M01197 TRANSFAC - 101815469 101815479 8.0E-06 ATAAGGAAAAA 11
V_GADP_01_M01258 TRANSFAC + 101817673 101817684 4.0E-06 CGCTTCCGGTGC 12
V_IRF3_06_M02871 TRANSFAC + 101817193 101817206 8.0E-06 ATAGAAAGGGGTGA 14
V_AR_04_M01201 TRANSFAC + 101817845 101817859 6.0E-06 GGAACGTTCTGTGCT 15
V_GR_Q6_M00192 TRANSFAC + 101817843 101817861 4.0E-06 TGGGAACGTTCTGTGCTAT 19
V_MEF2_04_M00233 TRANSFAC + 101813795 101813816 1.0E-06 TATGTGTCTAAAAATAAGCTTC 22
V_KLF7_03_M02773 TRANSFAC - 101817771 101817786 5.0E-06 TCGGCCACGCCCCCCT 16
V_MEF2_Q6_01_M00941 TRANSFAC - 101813802 101813813 2.0E-06 GCTTATTTTTAG 12
V_MEF2_Q6_01_M00941 TRANSFAC - 101813829 101813840 0.0E+00 TGCTATTTTTAA 12
V_ARID3A_04_M02735 TRANSFAC + 101820756 101820772 3.0E-06 GTTGTTGATTAAAACCC 17
V_BRACH_01_M00150 TRANSFAC - 101813784 101813807 6.0E-06 TTTTAGACACATAGAGGTGATATT 24
V_SP1_01_M00008 TRANSFAC - 101817744 101817753 3.0E-06 GGGGCGGGGT 10
V_NR1B1_Q6_M02110 TRANSFAC - 101816926 101816935 4.0E-06 AAAGGTCAAC 10
V_ICSBP_Q6_M00699 TRANSFAC + 101815440 101815451 2.0E-06 AAACTGAAACCA 12
V_ICSBP_Q6_M00699 TRANSFAC - 101816717 101816728 3.0E-06 GAAATGAAAGCG 12
V_ICSBP_Q6_M00699 TRANSFAC - 101817922 101817933 2.0E-06 AAAAAGAAAGTA 12
V_NEUROD_02_M01288 TRANSFAC - 101818613 101818624 1.0E-06 CTGCAGCTGTCC 12
V_MTF1_06_M02882 TRANSFAC - 101817925 101817938 9.0E-06 AAAAAAAAAAGAAA 14
V_MTF1_06_M02882 TRANSFAC - 101817931 101817944 2.0E-06 AATTAGAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 101817932 101817945 1.0E-06 CAATTAGAAAAAAA 14
V_HAND1E47_01_M00222 TRANSFAC + 101818680 101818695 9.0E-06 AAGGGGACCTGGCATT 16
V_LBP9_01_M01592 TRANSFAC - 101815446 101815462 1.0E-06 CAAGTATGAACTGGTTT 17
V_POU5F1_01_M01307 TRANSFAC - 101815505 101815514 9.0E-06 AATGCAAGAA 10
V_GABPBETA_Q3_M01876 TRANSFAC + 101817295 101817305 7.0E-06 ACAGGAAGGGC 11
V_TAL1_01_M01591 TRANSFAC - 101816822 101816834 1.0E-05 CATCCTTCTCTAC 13
V_EBNA1_01_M01745 TRANSFAC - 101813834 101813849 8.0E-06 GAAAGAAAATGCTATT 16
V_ZBTB4_04_M02929 TRANSFAC + 101812888 101812903 6.0E-06 TAGTCACTGTGAAAAG 16
V_AIRE_01_M00999 TRANSFAC - 101813810 101813835 1.0E-05 TTTTTAAATGGTCCTGCCGGAAGCTT 26
V_DMRT7_01_M01151 TRANSFAC + 101815460 101815473 0.0E+00 TTGTTTCAGTTTTT 14
V_P53_04_M01652 TRANSFAC - 101815446 101815465 8.0E-06 AAACAAGTATGAACTGGTTT 20
V_RSRFC4_01_M00026 TRANSFAC - 101813799 101813814 2.0E-06 AGCTTATTTTTAGACA 16
V_RSRFC4_01_M00026 TRANSFAC + 101813826 101813841 8.0E-06 CATTTAAAAATAGCAT 16
V_RSRFC4_01_M00026 TRANSFAC - 101813826 101813841 0.0E+00 ATGCTATTTTTAAATG 16
V_E47_01_M00002 TRANSFAC - 101818611 101818625 6.0E-06 CCTGCAGCTGTCCCC 15
V_T3RBETA_Q6_01_M02119 TRANSFAC - 101818636 101818652 5.0E-06 AAGCTTGATGAGGTCAG 17
V_ETS1_B_M00339 TRANSFAC + 101817295 101817309 1.0E-06 ACAGGAAGGGCTTGG 15
V_SAP1A_03_M02058 TRANSFAC - 101817673 101817682 7.0E-06 ACCGGAAGCG 10
V_IRF1_Q6_01_M01881 TRANSFAC - 101815438 101815451 8.0E-06 TGGTTTCAGTTTGA 14
V_IRF1_Q6_01_M01881 TRANSFAC + 101815460 101815473 1.0E-06 TTGTTTCAGTTTTT 14
V_IRF1_Q6_01_M01881 TRANSFAC + 101817922 101817935 1.0E-06 TACTTTCTTTTTTT 14
V_P63_01_M01656 TRANSFAC - 101815446 101815465 2.0E-06 AAACAAGTATGAACTGGTTT 20
V_RARA_03_M02787 TRANSFAC - 101816924 101816939 4.0E-06 ATGGAAAGGTCAACTA 16
V_LXRA_RXRA_Q3_M00647 TRANSFAC - 101818632 101818646 4.0E-06 GATGAGGTCAGTGCT 15
V_NUR77_Q5_M01217 TRANSFAC + 101816927 101816936 1.0E-06 TTGACCTTTC 10
V_SRF_06_M02916 TRANSFAC + 101816881 101816897 6.0E-06 CTGAAAAGAAAAACAGT 17
V_SRF_06_M02916 TRANSFAC - 101817925 101817941 2.0E-06 TAGAAAAAAAAAAGAAA 17
V_SRF_06_M02916 TRANSFAC - 101817926 101817942 0.0E+00 TTAGAAAAAAAAAAGAA 17
V_SRF_06_M02916 TRANSFAC - 101817927 101817943 0.0E+00 ATTAGAAAAAAAAAAGA 17
V_SRF_06_M02916 TRANSFAC - 101817928 101817944 5.0E-06 AATTAGAAAAAAAAAAG 17
V_FOXO1_04_M01969 TRANSFAC - 101820748 101820767 7.0E-06 TTAATCAACAACACTATTAT 20
V_ERG_02_M01985 TRANSFAC - 101817673 101817682 6.0E-06 ACCGGAAGCG 10
V_MEF2_01_M00006 TRANSFAC + 101813800 101813815 0.0E+00 GTCTAAAAATAAGCTT 16
V_MEF2_01_M00006 TRANSFAC + 101813827 101813842 1.0E-05 ATTTAAAAATAGCATT 16
V_MEF2A_05_M01301 TRANSFAC - 101813802 101813813 1.0E-06 GCTTATTTTTAG 12
V_MEF2A_05_M01301 TRANSFAC - 101813829 101813840 0.0E+00 TGCTATTTTTAA 12
V_HMEF2_Q6_M00406 TRANSFAC + 101813800 101813815 0.0E+00 GTCTAAAAATAAGCTT 16
V_HMEF2_Q6_M00406 TRANSFAC + 101813827 101813842 1.0E-05 ATTTAAAAATAGCATT 16
V_LPOLYA_B_M00318 TRANSFAC + 101818675 101818682 7.0E-06 CAATAAAG 8
V_NFYA_Q5_M02106 TRANSFAC + 101817727 101817740 6.0E-06 CGGCCAATCGCAGG 14
V_SP1_Q4_01_M00932 TRANSFAC - 101817743 101817755 5.0E-06 ACGGGGCGGGGTC 13
V_TCF3_05_M02920 TRANSFAC - 101817929 101817943 6.0E-06 ATTAGAAAAAAAAAA 15
V_AR_01_M00481 TRANSFAC + 101817845 101817859 7.0E-06 GGAACGTTCTGTGCT 15
V_DMRT5_01_M01150 TRANSFAC + 101815458 101815472 7.0E-06 ACTTGTTTCAGTTTT 15
V_PAX6_01_M00097 TRANSFAC - 101818547 101818567 4.0E-06 TGCGTTCACGCTTCATGTCAT 21
V_ETV3_02_M02068 TRANSFAC - 101817673 101817682 9.0E-06 ACCGGAAGCG 10
V_NANOG_02_M01247 TRANSFAC - 101817922 101817941 4.0E-06 TAGAAAAAAAAAAGAAAGTA 20
V_NANOG_02_M01247 TRANSFAC - 101817923 101817942 1.0E-06 TTAGAAAAAAAAAAGAAAGT 20
V_T3RALPHA_Q6_M01724 TRANSFAC - 101818636 101818646 5.0E-06 GATGAGGTCAG 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL