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POLR3E Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55718 polymerase (RNA) III (DNA directed) polypeptide E (80kD) chr16 + 22303695 - 22309195 22308695 Transcription Factor Binding Sites   Download all TFBS in the POLR3E promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 22309695 22309708 0.0E+00 GAAAACATGTTGTC 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 22309695 22309708 0.0E+00 GACAACATGTTTTC 14 SP3_C2H2_DBD_monomeric_11_1 SELEX - 22308512 22308522 4.0E-06 CCCACGCCCCC 11 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 22307785 22307801 7.0E-06 CCCTTATGAATGGATTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 22308512 22308522 6.0E-06 CCCACGCCCCC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 22309468 22309479 4.0E-06 TCAGTAAACAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 22309466 22309478 4.0E-06 TGTCAGTAAACAA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 22309470 22309482 0.0E+00 AGTAAACAAACAA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 22309384 22309394 9.0E-06 TGAATAAATGA 11 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 22309230 22309243 1.0E-05 GACCACCCGCGAGG 14 FOXO1_forkhead_DBD_monomeric_8_1 SELEX + 22309471 22309478 7.0E-06 GTAAACAA 8 IRF1_MA0050.1 JASPAR + 22308413 22308424 6.0E-06 AAAAGCAAAAGC 12 POU6F2_POU_DBD_dimeric_16_1 SELEX - 22307817 22307832 1.0E-05 TTTAAGAGGTGATTAG 16 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 22309923 22309931 5.0E-06 CCCACTTAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 22309471 22309481 0.0E+00 GTAAACAAACA 11 SP1_MA0079.2 JASPAR - 22309003 22309012 9.0E-06 CCCCTCCTCC 10 znf143_MA0088.1 JASPAR - 22308680 22308699 2.0E-06 TCTTACCCACAATGCCCCGC 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 22309471 22309481 0.0E+00 GTAAACAAACA 11 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 22308681 22308696 0.0E+00 TACCCACAATGCCCCG 16 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 22308342 22308352 2.0E-06 TTCAAGGTGAT 11 ID4_bHLH_DBD_dimeric_10_1 SELEX + 22309156 22309165 5.0E-06 AACACCTGTC 10 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 22307812 22307824 1.0E-06 ATGATCTAATCAC 13 FOXO3_forkhead_full_dimeric_14_1 SELEX + 22309695 22309708 0.0E+00 GAAAACATGTTGTC 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 22309695 22309708 0.0E+00 GACAACATGTTTTC 14 FOXB1_forkhead_full_monomeric_9_1 SELEX + 22309470 22309478 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX + 22309471 22309478 7.0E-06 GTAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 22309973 22309984 5.0E-06 AAGAATAAGAAT 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 22309469 22309481 1.0E-06 CAGTAAACAAACA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 22309695 22309708 0.0E+00 GAAAACATGTTGTC 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 22309695 22309708 1.0E-06 GACAACATGTTTTC 14 IRF2_MA0051.1 JASPAR + 22308412 22308429 2.0E-06 CAAAAGCAAAAGCATTAA 18 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 22309695 22309708 0.0E+00 GAAAACATGTTGTC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 22309695 22309708 0.0E+00 GACAACATGTTTTC 14 V_HNF3B_01_M00131 TRANSFAC - 22309472 22309486 1.0E-05 GACCTTGTTTGTTTA 15 V_E2A_Q6_01_M02088 TRANSFAC + 22307617 22307629 0.0E+00 GGACACCTGCAGA 13 V_DBX1_01_M01483 TRANSFAC + 22309704 22309720 1.0E-05 TTGTCAAGTAATAACAA 17 V_MYOD_Q6_M00184 TRANSFAC + 22309156 22309165 3.0E-06 AACACCTGTC 10 V_FOXA2_04_M02749 TRANSFAC + 22309466 22309482 1.0E-06 TGTCAGTAAACAAACAA 17 V_ZFX_01_M01593 TRANSFAC + 22309070 22309085 1.0E-06 GGGGAGGCCGCGGCCG 16 V_MMEF2_Q6_M00405 TRANSFAC + 22308231 22308246 8.0E-06 GTTTCTAAAAATGCGT 16 V_GATA3_03_M00351 TRANSFAC + 22309535 22309544 4.0E-06 AGAGATCTTA 10 V_EBOX_Q6_01_M01034 TRANSFAC + 22308728 22308737 8.0E-06 CCACGTGTCC 10 V_FOXJ1_04_M02854 TRANSFAC + 22309709 22309723 4.0E-06 AAGTAATAACAAACC 15 V_SP1_Q6_01_M00931 TRANSFAC + 22308677 22308686 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC + 22312027 22312037 1.0E-06 TGATTTTCATT 11 V_FOXO3A_Q1_M01137 TRANSFAC + 22309470 22309481 9.0E-06 AGTAAACAAACA 12 V_SOX11_04_M02899 TRANSFAC - 22308322 22308335 1.0E-06 AGAATTATTTTAAA 14 V_FOXJ1_03_M02750 TRANSFAC + 22309468 22309483 0.0E+00 TCAGTAAACAAACAAG 16 V_SP1_03_M02281 TRANSFAC - 22309003 22309012 9.0E-06 CCCCTCCTCC 10 V_GKLF_02_M01588 TRANSFAC - 22308616 22308627 8.0E-06 GCCCCGCCCTGC 12 V_OCT_C_M00210 TRANSFAC + 22312026 22312038 3.0E-06 CTGATTTTCATTC 13 V_NKX24_01_M01350 TRANSFAC + 22309920 22309935 2.0E-06 TTACCCACTTAACCAT 16 V_SOX21_03_M02803 TRANSFAC + 22308321 22308336 9.0E-06 TTTTAAAATAATTCTA 16 V_SOX21_03_M02803 TRANSFAC - 22308321 22308336 2.0E-06 TAGAATTATTTTAAAA 16 V_TCFAP2E_04_M02926 TRANSFAC + 22308359 22308372 8.0E-06 TTAAGCAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 22308360 22308373 1.0E-06 TAAGCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 22308361 22308374 6.0E-06 AAGCAAAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC - 22308321 22308330 2.0E-06 TATTTTAAAA 10 V_TAL1_GATA1_01_M02243 TRANSFAC + 22309567 22309584 2.0E-06 CTGTGAAATAGAGATAAT 18 V_RPC155_01_M01798 TRANSFAC + 22308516 22308531 1.0E-06 GCGTGGGTTCGAATCC 16 V_ELF4_04_M02850 TRANSFAC + 22308318 22308334 5.0E-06 GCTTTTTAAAATAATTC 17 V_ELF4_04_M02850 TRANSFAC + 22308321 22308337 9.0E-06 TTTTAAAATAATTCTAT 17 V_ELF4_04_M02850 TRANSFAC + 22308361 22308377 8.0E-06 AAGCAAAAAAAAAACCT 17 V_ELF4_04_M02850 TRANSFAC + 22308362 22308378 5.0E-06 AGCAAAAAAAAAACCTC 17 V_TAL1_Q6_M00993 TRANSFAC - 22308972 22308981 3.0E-06 TCCAGCTGCT 10 V_GC_01_M00255 TRANSFAC + 22308655 22308668 1.0E-06 AGGGGGCGGAGCCG 14 V_FOXA2_02_M02853 TRANSFAC + 22309710 22309724 0.0E+00 AGTAATAACAAACCT 15 V_POU3F2_01_M00463 TRANSFAC - 22309382 22309395 4.0E-06 CTGAATAAATGAAT 14 V_FREAC3_01_M00291 TRANSFAC + 22309466 22309481 0.0E+00 TGTCAGTAAACAAACA 16 V_HNF3G_Q4_M02015 TRANSFAC - 22309474 22309481 7.0E-06 TGTTTGTT 8 V_STAF_01_M00262 TRANSFAC - 22308677 22308698 0.0E+00 CTTACCCACAATGCCCCGCCCC 22 V_HNF1_Q6_M00790 TRANSFAC - 22309703 22309720 7.0E-06 TTGTTATTACTTGACAAC 18 V_NKX31_02_M02782 TRANSFAC + 22309919 22309935 0.0E+00 CTTACCCACTTAACCAT 17 V_NKX26_01_M01322 TRANSFAC + 22309920 22309935 1.0E-06 TTACCCACTTAACCAT 16 V_XFD3_01_M00269 TRANSFAC + 22309468 22309481 0.0E+00 TCAGTAAACAAACA 14 V_IRF2_01_M00063 TRANSFAC + 22308412 22308424 8.0E-06 CAAAAGCAAAAGC 13 V_SP4_03_M02810 TRANSFAC - 22308651 22308667 6.0E-06 GGCTCCGCCCCCTCCGC 17 V_KROX_Q6_M00982 TRANSFAC - 22308651 22308664 5.0E-06 TCCGCCCCCTCCGC 14 V_SP1_Q6_M00196 TRANSFAC + 22308655 22308667 2.0E-06 AGGGGGCGGAGCC 13 V_FOXK1_04_M02856 TRANSFAC + 22309708 22309722 2.0E-06 CAAGTAATAACAAAC 15 V_IRF3_Q3_M01279 TRANSFAC - 22308360 22308372 3.0E-06 TTTTTTTTGCTTA 13 V_HNF3_Q6_M00791 TRANSFAC + 22309471 22309483 7.0E-06 GTAAACAAACAAG 13 V_OCT1_05_M00161 TRANSFAC + 22312026 22312039 3.0E-06 CTGATTTTCATTCC 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 22309471 22309481 9.0E-06 TGTTTGTTTAC 11 V_HNF1_Q6_01_M01011 TRANSFAC + 22308359 22308379 6.0E-06 TTAAGCAAAAAAAAAACCTCA 21 V_HNF1_Q6_01_M01011 TRANSFAC + 22309706 22309726 1.0E-05 GTCAAGTAATAACAAACCTTC 21 V_SOX18_03_M02801 TRANSFAC - 22308321 22308336 0.0E+00 TAGAATTATTTTAAAA 16 Tal1_Gata1_MA0140.1 JASPAR + 22309567 22309584 2.0E-06 CTGTGAAATAGAGATAAT 18 V_HBP1_03_M02762 TRANSFAC - 22307784 22307799 1.0E-06 CTTATGAATGGATTAA 16 V_HBP1_03_M02762 TRANSFAC - 22309379 22309394 3.0E-06 TGAATAAATGAATGAG 16 V_SP1SP3_Q4_M01219 TRANSFAC - 22308653 22308663 1.0E-06 CCGCCCCCTCC 11 V_WHN_B_M00332 TRANSFAC - 22309667 22309677 4.0E-06 AATGACGCTAA 11 V_CRX_02_M01436 TRANSFAC + 22309340 22309355 2.0E-06 TGAACCGGATTAGCCT 16 V_XFD2_01_M00268 TRANSFAC + 22309468 22309481 5.0E-06 TCAGTAAACAAACA 14 V_NCX_02_M01420 TRANSFAC + 22309704 22309720 3.0E-06 TTGTCAAGTAATAACAA 17 V_STAT4_Q5_M02117 TRANSFAC + 22309944 22309953 6.0E-06 TTATCAGAAA 10 V_TCF1_07_M02919 TRANSFAC + 22308396 22308409 6.0E-06 ATGTCCAGATTAAA 14 V_TCF1_07_M02919 TRANSFAC + 22309340 22309353 7.0E-06 TGAACCGGATTAGC 14 V_STAF_02_M00264 TRANSFAC - 22308678 22308698 7.0E-06 CTTACCCACAATGCCCCGCCC 21 V_TBP_06_M02814 TRANSFAC + 22308318 22308333 7.0E-06 GCTTTTTAAAATAATT 16 V_HIC1_02_M01072 TRANSFAC - 22308666 22308680 5.0E-06 CCCCGGTGCACGCGG 15 V_IRX3_01_M01318 TRANSFAC + 22309694 22309710 1.0E-05 AGAAAACATGTTGTCAA 17 V_CTCF_01_M01200 TRANSFAC - 22308602 22308621 1.0E-05 CCCTGCAGCAGGGGGCGCTG 20 V_AP1_Q2_01_M00924 TRANSFAC + 22309099 22309110 9.0E-06 TGACTCAGGGTC 12 V_OCT_Q6_M00795 TRANSFAC + 22312027 22312037 5.0E-06 TGATTTTCATT 11 V_SOX17_04_M02904 TRANSFAC + 22309376 22309392 3.0E-06 TTCCTCATTCATTTATT 17 V_NKX32_02_M01482 TRANSFAC + 22309919 22309935 0.0E+00 CTTACCCACTTAACCAT 17 V_IRF7_01_M00453 TRANSFAC - 22309498 22309515 4.0E-06 AAGGAATTCTAAAGCTAA 18 V_NEUROD_02_M01288 TRANSFAC + 22308452 22308463 6.0E-06 TTGCAGCTGGGT 12 V_NEUROD_02_M01288 TRANSFAC - 22311876 22311887 9.0E-06 CTGCAGCTGGGC 12 V_SP4_Q5_M01273 TRANSFAC - 22308676 22308686 2.0E-06 GCCCCGCCCCG 11 V_FREAC2_01_M00290 TRANSFAC + 22309466 22309481 8.0E-06 TGTCAGTAAACAAACA 16 V_ELF1_Q6_M00746 TRANSFAC + 22308694 22308705 3.0E-06 GTAAGAGGAAAC 12 V_HFH8_01_M00294 TRANSFAC - 22309472 22309484 5.0E-06 CCTTGTTTGTTTA 13 V_YY1_03_M02044 TRANSFAC - 22308757 22308768 5.0E-06 GCGGCCATGTTG 12 V_FXR_IR1_Q6_M00767 TRANSFAC + 22310010 22310022 7.0E-06 AAGTTTCTGTCCT 13 V_MYOD_01_M00001 TRANSFAC - 22309155 22309166 2.0E-06 GGACAGGTGTTT 12 V_NKX25_03_M01414 TRANSFAC + 22309920 22309935 9.0E-06 TTACCCACTTAACCAT 16 V_POU5F1_01_M01307 TRANSFAC + 22308408 22308417 9.0E-06 AATGCAAAAG 10 V_AP4_01_M00005 TRANSFAC - 22308876 22308893 7.0E-06 AGCCCCAGCTCGGGCACT 18 V_FAC1_01_M00456 TRANSFAC + 22308361 22308374 4.0E-06 AAGCAAAAAAAAAA 14 V_TAL1_01_M01591 TRANSFAC + 22309558 22309570 4.0E-06 TTTCCTCATCTGT 13 V_TAL1_01_M01591 TRANSFAC - 22311884 22311896 2.0E-06 CTGCCTTCTCTGC 13 V_OSR2_04_M02889 TRANSFAC - 22308423 22308438 4.0E-06 GAAAGCTACTTAATGC 16 V_AREB6_02_M00413 TRANSFAC + 22309155 22309166 5.0E-06 AAACACCTGTCC 12 V_FOXL1_04_M02753 TRANSFAC + 22309466 22309482 7.0E-06 TGTCAGTAAACAAACAA 17 V_GATA3_02_M00350 TRANSFAC + 22309576 22309585 0.0E+00 AGAGATAATA 10 V_T3R_Q6_M00963 TRANSFAC + 22309750 22309758 7.0E-06 CCTGTCCTT 9 V_CPHX_01_M01478 TRANSFAC + 22307812 22307825 1.0E-06 ATGATCTAATCACC 14 V_SMAD3_03_M02794 TRANSFAC + 22309832 22309848 2.0E-06 CAAACCCAGACAACTCA 17 V_BDP1_01_M01796 TRANSFAC - 22308520 22308531 0.0E+00 GGATTCGAACCC 12 V_BDP1_01_M01796 TRANSFAC + 22309880 22309891 2.0E-06 GGATTTGAACCT 12 V_FPM315_01_M01587 TRANSFAC + 22309000 22309011 2.0E-06 CGGGGAGGAGGG 12 V_ASCL2_04_M02841 TRANSFAC - 22308993 22309008 1.0E-05 TCCTCCCCGCCCGAGT 16 V_STAT1STAT1_Q3_M01212 TRANSFAC + 22309942 22309954 3.0E-06 GTTTATCAGAAAA 13 V_FOX_Q2_M00809 TRANSFAC - 22309468 22309480 4.0E-06 GTTTGTTTACTGA 13 V_E47_01_M00002 TRANSFAC - 22309153 22309167 1.0E-05 CGGACAGGTGTTTCT 15 V_OSR1_04_M02888 TRANSFAC - 22308423 22308438 2.0E-06 GAAAGCTACTTAATGC 16 V_SOX8_03_M02808 TRANSFAC - 22308322 22308338 1.0E-05 TATAGAATTATTTTAAA 17 V_GATA2_03_M00349 TRANSFAC + 22309576 22309585 1.0E-06 AGAGATAATA 10 V_SRF_06_M02916 TRANSFAC + 22308358 22308374 2.0E-06 GTTAAGCAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 22308361 22308377 5.0E-06 AAGCAAAAAAAAAACCT 17 V_SRF_06_M02916 TRANSFAC + 22308362 22308378 6.0E-06 AGCAAAAAAAAAACCTC 17 V_SRF_06_M02916 TRANSFAC + 22308363 22308379 1.0E-06 GCAAAAAAAAAACCTCA 17 V_HFH3_01_M00289 TRANSFAC - 22309472 22309484 9.0E-06 CCTTGTTTGTTTA 13 V_FOXJ2_01_M00422 TRANSFAC + 22309465 22309482 8.0E-06 GTGTCAGTAAACAAACAA 18 V_VDR_Q3_M00444 TRANSFAC - 22310017 22310031 5.0E-06 GGTGGAATGAGGACA 15 V_NMYC_01_M00055 TRANSFAC + 22308726 22308737 6.0E-06 CCCCACGTGTCC 12 V_GSC_01_M01428 TRANSFAC - 22309341 22309357 8.0E-06 AGAGGCTAATCCGGTTC 17 V_FOXO1_01_M00473 TRANSFAC + 22309470 22309479 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC - 22309470 22309478 2.0E-06 TTGTTTACT 9 V_HNF3B_Q6_M02014 TRANSFAC - 22309474 22309482 1.0E-05 TTGTTTGTT 9 V_IRF1_01_M00062 TRANSFAC + 22308412 22308424 1.0E-06 CAAAAGCAAAAGC 13 V_MEF2_01_M00006 TRANSFAC + 22308320 22308335 1.0E-06 TTTTTAAAATAATTCT 16 V_ARP1_01_M00155 TRANSFAC + 22311941 22311956 2.0E-06 TGAGGCCTTGGGCTCT 16 V_FOXO4_01_M00472 TRANSFAC + 22309471 22309481 5.0E-06 GTAAACAAACA 11 V_HMEF2_Q6_M00406 TRANSFAC + 22308320 22308335 9.0E-06 TTTTTAAAATAATTCT 16 V_HMEF2_Q6_M00406 TRANSFAC - 22309494 22309509 1.0E-05 TTCTAAAGCTAACCCA 16 V_SOX5_07_M02909 TRANSFAC - 22308322 22308338 8.0E-06 TATAGAATTATTTTAAA 17 V_GATA1_02_M00126 TRANSFAC + 22309574 22309587 6.0E-06 ATAGAGATAATAGA 14 V_GATA6_04_M02757 TRANSFAC + 22309573 22309589 1.0E-05 AATAGAGATAATAGAAA 17 V_SP1_Q4_01_M00932 TRANSFAC + 22308655 22308667 2.0E-06 AGGGGGCGGAGCC 13 V_EHF_07_M02849 TRANSFAC + 22309584 22309599 9.0E-06 TAGAAATTCCTACCTC 16 V_BRF1_01_M01747 TRANSFAC + 22308520 22308532 0.0E+00 GGGTTCGAATCCC 13 V_BRF1_01_M01747 TRANSFAC - 22309879 22309891 0.0E+00 AGGTTCAAATCCC 13 V_TCF3_05_M02920 TRANSFAC + 22308361 22308375 0.0E+00 AAGCAAAAAAAAAAC 15 V_STAT1_05_M01260 TRANSFAC - 22309934 22309955 8.0E-06 GTTTTCTGATAAACGGCAGTAT 22 V_FOXK1_03_M02752 TRANSFAC + 22309466 22309482 6.0E-06 TGTCAGTAAACAAACAA 17 V_SOX14_03_M02798 TRANSFAC - 22308321 22308336 4.0E-06 TAGAATTATTTTAAAA 16 V_NANOG_02_M01247 TRANSFAC + 22309972 22309991 8.0E-06 TAAGAATAAGAATAAGGATC 20 V_NKX21_01_M01312 TRANSFAC + 22309920 22309935 1.0E-06 TTACCCACTTAACCAT 16 V_OTX3_01_M01403 TRANSFAC + 22309340 22309356 5.0E-06 TGAACCGGATTAGCCTC 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.