Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF446 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55663 zinc finger protein 446 chr19 + 58982794 - 58988294 58987794 Transcription Factor Binding Sites   Download all TFBS in the ZNF446 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 58987419 58987432 7.0E-06 TAGTTCAAAGGGCA 14 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 5.0E-06 TGAGAGCTGTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 3.0E-06 TGACAGCTCTCA 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 58986055 58986065 3.0E-06 TCAAAAGGTCA 11 ESR2_MA0258.1 JASPAR + 58986058 58986075 9.0E-06 AAAGGTCAGACTGAACAC 18 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 58986902 58986914 5.0E-06 CAGAGGTCAAAGA 13 RFX4_RFX_DBD_dimeric_16_1 SELEX - 58987082 58987097 6.0E-06 TGTTCCCGTGGCAACG 16 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 58987419 58987432 3.0E-06 TAGTTCAAAGGGCA 14 Tp53_p53l_DBD_dimeric_18_2 SELEX + 58985006 58985023 5.0E-06 AACATACCCTGACATGCC 18 STAT1_MA0137.2 JASPAR + 58988300 58988314 2.0E-06 AATTTCCAGGAAGCT 15 STAT1_MA0137.2 JASPAR - 58988300 58988314 6.0E-06 AGCTTCCTGGAAATT 15 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 3.0E-06 TGAGAGCTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 4.0E-06 TGACAGCTCTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 4.0E-06 TGAGAGCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 4.0E-06 TGACAGCTCTCA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 58986051 58986068 8.0E-06 TATGTCAAAAGGTCAGAC 18 TCF7L1_HMG_full_monomeric_12_1 SELEX + 58986903 58986914 5.0E-06 AGAGGTCAAAGA 12 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 58986047 58986065 8.0E-06 CTTCTATGTCAAAAGGTCA 19 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 58987364 58987382 1.0E-06 AATGCGGGTCAGCGGGTCA 19 RUNX3_RUNX_full_monomeric_10_1 SELEX + 58986106 58986115 1.0E-05 AAACCACAGA 10 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 1.0E-06 TGAGAGCTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 4.0E-06 TGACAGCTCTCA 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 58987082 58987097 6.0E-06 CGTTGCCACGGGAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 58987082 58987097 5.0E-06 TGTTCCCGTGGCAACG 16 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 58987415 58987432 1.0E-05 AATGTAGTTCAAAGGGCA 18 RUNX2_RUNX_DBD_dimeric_18_1 SELEX + 58986097 58986114 7.0E-06 AATCCACTGAAACCACAG 18 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 58986052 58986065 1.0E-06 ATGTCAAAAGGTCA 14 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 58987419 58987433 6.0E-06 TAGTTCAAAGGGCAT 15 SOX15_HMG_full_dimeric_15_1 SELEX - 58986173 58986187 8.0E-06 AGGAATGCCATTGCT 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 58987419 58987432 2.0E-06 TAGTTCAAAGGGCA 14 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 58987419 58987433 3.0E-06 TAGTTCAAAGGGCAT 15 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 58986051 58986066 1.0E-06 TATGTCAAAAGGTCAG 16 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 58987368 58987383 9.0E-06 CGGGTCAGCGGGTCAC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 58987082 58987097 5.0E-06 CGTTGCCACGGGAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 58987082 58987097 7.0E-06 TGTTCCCGTGGCAACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 58987082 58987097 4.0E-06 CGTTGCCACGGGAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 58987082 58987097 2.0E-06 TGTTCCCGTGGCAACG 16 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 58986202 58986213 2.0E-06 TGAGAGCTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 58986202 58986213 3.0E-06 TGACAGCTCTCA 12 HNF4A_MA0114.1 JASPAR + 58987420 58987432 2.0E-06 AGTTCAAAGGGCA 13 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 9.0E-06 TGAGAGCTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 4.0E-06 TGACAGCTCTCA 12 MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 58986201 58986214 3.0E-06 GTGAGAGCTGTCAC 14 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 58986201 58986214 1.0E-06 GTGACAGCTCTCAC 14 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 58987419 58987432 4.0E-06 TAGTTCAAAGGGCA 14 SPDEF_ETS_full_monomeric_11_1 SELEX - 58987522 58987532 6.0E-06 TCCCGGATGTG 11 RUNX1_MA0002.2 JASPAR - 58986106 58986116 1.0E-06 CTCTGTGGTTT 11 TP53_MA0106.1 JASPAR + 58985003 58985022 4.0E-06 TTGAACATACCCTGACATGC 20 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 58986051 58986065 7.0E-06 TATGTCAAAAGGTCA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 58986051 58986066 0.0E+00 TATGTCAAAAGGTCAG 16 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 58987419 58987432 3.0E-06 TAGTTCAAAGGGCA 14 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 58986051 58986065 1.0E-06 TATGTCAAAAGGTCA 15 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 58986202 58986213 2.0E-06 TGAGAGCTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 58986202 58986213 1.0E-06 TGACAGCTCTCA 12 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 58986097 58986114 5.0E-06 AATCCACTGAAACCACAG 18 V_MEQ_01_M02049 TRANSFAC + 58986127 58986135 4.0E-06 AAAACACAT 9 V_TGIF_01_M00418 TRANSFAC + 58986206 58986216 1.0E-06 AGCTGTCACTA 11 V_MEIS1_02_M01419 TRANSFAC + 58986202 58986217 8.0E-06 TGAGAGCTGTCACTAA 16 V_PREP1_01_M01459 TRANSFAC + 58986202 58986217 2.0E-06 TGAGAGCTGTCACTAA 16 V_LEF1_04_M02774 TRANSFAC - 58987417 58987433 4.0E-06 ATGCCCTTTGAACTACA 17 V_ATF_01_M00017 TRANSFAC - 58986848 58986861 7.0E-06 CTCTGACGTCTTCA 14 V_E2F4_Q6_M02090 TRANSFAC + 58986934 58986943 1.0E-05 GCGGGAGAAA 10 V_GCM_Q2_M00634 TRANSFAC - 58987364 58987375 4.0E-06 CTGACCCGCATT 12 V_PAX4_03_M00378 TRANSFAC + 58986815 58986826 3.0E-06 AACCTCCACCCC 12 V_DEAF1_01_M01001 TRANSFAC - 58987084 58987108 6.0E-06 CCGCCTCCAGCTGTTCCCGTGGCAA 25 V_EGR_Q6_M00807 TRANSFAC + 58987154 58987164 3.0E-06 GTGGGGGCGGC 11 V_IRF2_Q6_M01882 TRANSFAC - 58987969 58987984 6.0E-06 GTGAAAACGAAAAGCA 16 V_RFX4_03_M02789 TRANSFAC - 58987080 58987094 1.0E-05 TCCCGTGGCAACGTT 15 V_EAR2_Q2_M01728 TRANSFAC + 58987962 58987975 1.0E-05 TGGCCTTTGCTTTT 14 V_STAT5B_01_M00459 TRANSFAC + 58988300 58988314 2.0E-06 AATTTCCAGGAAGCT 15 V_STAT5B_01_M00459 TRANSFAC - 58988300 58988314 5.0E-06 AGCTTCCTGGAAATT 15 V_HNF4A_03_M02220 TRANSFAC + 58987420 58987432 2.0E-06 AGTTCAAAGGGCA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 58987420 58987432 7.0E-06 TGCCCTTTGAACT 13 V_PU1_Q4_M01172 TRANSFAC + 58987780 58987798 4.0E-06 CCTCTTGCCTTCCCCTTTT 19 V_MEF2A_Q6_M02024 TRANSFAC + 58986122 58986131 5.0E-06 TATTTAAAAC 10 V_TGIF2_01_M01407 TRANSFAC + 58986202 58986217 9.0E-06 TGAGAGCTGTCACTAA 16 V_PPARGRXRA_01_M02262 TRANSFAC + 58987418 58987432 3.0E-06 GTAGTTCAAAGGGCA 15 V_TAL1_Q6_M00993 TRANSFAC - 58987094 58987103 7.0E-06 TCCAGCTGTT 10 V_TCF3_04_M02816 TRANSFAC + 58987417 58987433 2.0E-06 TGTAGTTCAAAGGGCAT 17 V_MEIS2_01_M01488 TRANSFAC + 58986202 58986217 5.0E-06 TGAGAGCTGTCACTAA 16 V_TGIF_02_M01346 TRANSFAC - 58986202 58986218 8.0E-06 CTTAGTGACAGCTCTCA 17 V_RUNX1_01_M02257 TRANSFAC - 58986106 58986116 1.0E-06 CTCTGTGGTTT 11 V_HNF4_01_B_M00411 TRANSFAC + 58987419 58987433 6.0E-06 TAGTTCAAAGGGCAT 15 V_SP4_03_M02810 TRANSFAC + 58987665 58987681 7.0E-06 GGGCCCGCCCACTTCCC 17 V_KROX_Q6_M00982 TRANSFAC - 58987151 58987164 5.0E-06 GCCGCCCCCACGCC 14 V_KROX_Q6_M00982 TRANSFAC + 58987668 58987681 7.0E-06 CCCGCCCACTTCCC 14 V_P53_03_M01651 TRANSFAC + 58985005 58985024 5.0E-06 GAACATACCCTGACATGCCA 20 V_P53_03_M01651 TRANSFAC - 58985005 58985024 4.0E-06 TGGCATGTCAGGGTATGTTC 20 V_CDX2_Q5_M00729 TRANSFAC - 58986026 58986039 1.0E-05 ATACTTTTACAGTC 14 V_SZF11_01_M01109 TRANSFAC + 58987087 58987101 4.0E-06 CCACGGGAACAGCTG 15 V_ERR1_Q3_M01841 TRANSFAC - 58987421 58987435 9.0E-06 CCATGCCCTTTGAAC 15 V_TCF7_03_M02817 TRANSFAC + 58987417 58987433 2.0E-06 TGTAGTTCAAAGGGCAT 17 V_TGIF1_01_M03111 TRANSFAC - 58986202 58986218 8.0E-06 CTTAGTGACAGCTCTCA 17 V_NR1B1_Q6_M02110 TRANSFAC + 58986058 58986067 2.0E-06 AAAGGTCAGA 10 V_NR1B1_Q6_M02110 TRANSFAC + 58986903 58986912 4.0E-06 AGAGGTCAAA 10 V_TFIII_Q6_M00706 TRANSFAC - 58987776 58987784 6.0E-06 AGAGGGAGG 9 V_NEUROD_02_M01288 TRANSFAC - 58987093 58987104 9.0E-06 CTCCAGCTGTTC 12 V_FXR_IR1_Q6_M00767 TRANSFAC + 58987249 58987261 3.0E-06 AAGTTTATAACCC 13 V_ATF1_Q6_M00691 TRANSFAC - 58986851 58986861 6.0E-06 CTCTGACGTCT 11 V_MRG2_01_M01395 TRANSFAC + 58986202 58986217 8.0E-06 TGAGAGCTGTCACTAA 16 V_PKNOX2_01_M01411 TRANSFAC + 58986202 58986217 6.0E-06 TGAGAGCTGTCACTAA 16 V_PDEF_01_M02040 TRANSFAC - 58987522 58987531 1.0E-05 CCCGGATGTG 10 V_HNF4_Q6_01_M01031 TRANSFAC + 58987420 58987433 4.0E-06 AGTTCAAAGGGCAT 14 V_TCF4_Q5_M00671 TRANSFAC - 58987422 58987429 1.0E-05 CCTTTGAA 8 V_P53_05_M01655 TRANSFAC + 58985005 58985024 1.0E-05 GAACATACCCTGACATGCCA 20 V_P53_05_M01655 TRANSFAC - 58985005 58985024 1.0E-06 TGGCATGTCAGGGTATGTTC 20 V_STAT1STAT1_Q3_M01212 TRANSFAC + 58988301 58988313 2.0E-06 ATTTCCAGGAAGC 13 V_P53_04_M01652 TRANSFAC - 58985005 58985024 1.0E-05 TGGCATGTCAGGGTATGTTC 20 V_GZF1_01_M01069 TRANSFAC - 58987238 58987249 4.0E-06 TGCGCGTCTGTA 12 V_P53_01_M00034 TRANSFAC + 58985005 58985024 2.0E-06 GAACATACCCTGACATGCCA 20 V_P53_01_M00034 TRANSFAC - 58985005 58985024 2.0E-06 TGGCATGTCAGGGTATGTTC 20 V_STAT5A_01_M00457 TRANSFAC + 58988300 58988314 1.0E-06 AATTTCCAGGAAGCT 15 V_STAT5A_01_M00457 TRANSFAC - 58988300 58988314 2.0E-06 AGCTTCCTGGAAATT 15 V_NUR77_Q5_M01217 TRANSFAC - 58986057 58986066 9.0E-06 CTGACCTTTT 10 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 58986106 58986113 1.0E-05 TGTGGTTT 8 V_MEF2_01_M00006 TRANSFAC + 58986028 58986043 7.0E-06 CTGTAAAAGTATCCCT 16 V_RXRLXRB_01_M01198 TRANSFAC + 58987420 58987432 2.0E-06 AGTTCAAAGGGCA 13 V_HNF4_01_M00134 TRANSFAC + 58987417 58987435 1.0E-06 TGTAGTTCAAAGGGCATGG 19 V_SOX5_04_M02910 TRANSFAC - 58986004 58986018 1.0E-06 ATTCAAAATTAAGAG 15 V_STAT1_05_M01260 TRANSFAC - 58988293 58988314 3.0E-06 AGCTTCCTGGAAATTGCAAACA 22 V_STAT1_05_M01260 TRANSFAC + 58988300 58988321 3.0E-06 AATTTCCAGGAAGCTCCCTGGA 22 V_RORA2_01_M00157 TRANSFAC + 58987414 58987426 8.0E-06 AAATGTAGTTCAA 13 PPARG_RXRA_MA0065.2 JASPAR + 58987418 58987432 3.0E-06 GTAGTTCAAAGGGCA 15 V_ESR2_01_M02377 TRANSFAC + 58986058 58986075 9.0E-06 AAAGGTCAGACTGAACAC 18 V_PPARA_01_M00242 TRANSFAC + 58987413 58987432 4.0E-06 GAAATGTAGTTCAAAGGGCA 20 V_TR4_03_M01782 TRANSFAC + 58987420 58987432 2.0E-06 AGTTCAAAGGGCA 13 V_PPARG_01_M00512 TRANSFAC + 58986901 58986921 4.0E-06 ACAGAGGTCAAAGATGGCCCT 21 V_PPARG_01_M00512 TRANSFAC + 58987416 58987436 5.0E-06 ATGTAGTTCAAAGGGCATGGG 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.