Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ATAD3A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55210 ATPase family, AAA domain containing 3A chr1 + 1442522 - 1448409 1447909 Transcription Factor Binding Sites   Download all TFBS in the ATAD3A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EBF1_EBF_full_dimeric_14_1 SELEX - 1447341 1447354 9.0E-06 ATTCCCGAGGGACG 14 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 1446567 1446583 6.0E-06 CAGGTAACTAAAGGTGA 17 NFIX_NFI_full_dimeric_15_2 SELEX + 1447219 1447233 9.0E-06 CTGGAAACTTGCCAC 15 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 1446566 1446583 7.0E-06 ACAGGTAACTAAAGGTGA 18 NFYA_MA0060.1 JASPAR - 1446483 1446498 5.0E-06 AATAGCCAATGGGCAC 16 E2F7_E2F_DBD_dimeric_14_1 SELEX - 1446541 1446554 0.0E+00 TTTTCCCGCCAAAC 14 E2F8_E2F_DBD_dimeric_12_1 SELEX - 1446542 1446553 0.0E+00 TTTCCCGCCAAA 12 E2F3_E2F_DBD_dimeric_18_3 SELEX - 1446539 1446556 1.0E-05 ATTTTTCCCGCCAAACCA 18 V_E2F4_Q6_M02090 TRANSFAC + 1446546 1446555 3.0E-06 GCGGGAAAAA 10 V_COE1_Q6_M01871 TRANSFAC + 1447343 1447356 9.0E-06 TCCCTCGGGAATTT 14 V_RP58_01_M00532 TRANSFAC - 1447378 1447389 8.0E-06 GAAGCATCTGGC 12 V_RFX4_03_M02789 TRANSFAC + 1447264 1447278 1.0E-06 GCCCCTAGCAACGGA 15 V_RFX4_03_M02789 TRANSFAC + 1447279 1447293 1.0E-06 GCCCCTAGCAACGGA 15 V_NERF_Q2_M00531 TRANSFAC - 1449910 1449927 1.0E-06 TTTCAGGAAGCGCCTTGG 18 V_RFXDC2_03_M02790 TRANSFAC + 1447264 1447278 1.0E-06 GCCCCTAGCAACGGA 15 V_RFXDC2_03_M02790 TRANSFAC + 1447279 1447293 1.0E-06 GCCCCTAGCAACGGA 15 V_MEF2_Q6_01_M00941 TRANSFAC + 1446492 1446503 0.0E+00 GGCTATTTTAAA 12 V_HIC1_02_M01072 TRANSFAC - 1446919 1446933 4.0E-06 CCGGGGTGCCCGGGC 15 V_HBP1_04_M02866 TRANSFAC + 1446482 1446498 4.0E-06 AGTGCCCATTGGCTATT 17 V_E2F_03_M00516 TRANSFAC + 1446542 1446553 1.0E-06 TTTGGCGGGAAA 12 V_CAAT_01_M00254 TRANSFAC - 1446487 1446498 9.0E-06 AATAGCCAATGG 12 V_E2F_Q6_01_M00920 TRANSFAC - 1446541 1446552 2.0E-06 TTCCCGCCAAAC 12 V_SMAD4_04_M02898 TRANSFAC - 1446522 1446538 1.0E-06 CTCACCCCGCCACTCTG 17 V_CAAT_C_M00200 TRANSFAC - 1446523 1446547 2.0E-06 GCCAAACCACTCACCCCGCCACTCT 25 V_ZFP206_01_M01742 TRANSFAC - 1447532 1447542 1.0E-06 TGCGCAGGCGC 11 V_NFY_01_M00287 TRANSFAC - 1446483 1446498 7.0E-06 AATAGCCAATGGGCAC 16 V_E2F_Q4_01_M00919 TRANSFAC - 1446541 1446551 4.0E-06 TCCCGCCAAAC 11 V_E2F_01_M00024 TRANSFAC + 1446543 1446557 0.0E+00 TTGGCGGGAAAAATG 15 V_MEF2A_05_M01301 TRANSFAC + 1446492 1446503 0.0E+00 GGCTATTTTAAA 12 V_NFYA_Q5_M02106 TRANSFAC - 1446483 1446496 8.0E-06 TAGCCAATGGGCAC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.