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RC3H2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54542 ring finger and CCCH-type domains 2 chr9 - 125667062 - 125672562 125667562 Transcription Factor Binding Sites   Download all TFBS in the RC3H2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 125668077 125668090 9.0E-06 GAAAACATGTATTT 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 125668077 125668090 9.0E-06 AAATACATGTTTTC 14 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 125663184 125663191 5.0E-06 ATAAACAA 8 NF-kappaB_MA0061.1 JASPAR + 125667857 125667866 9.0E-06 GGGAAATTCC 10 NF-kappaB_MA0061.1 JASPAR - 125667858 125667867 1.0E-06 GGGAATTTCC 10 SOX10_HMG_full_dimeric_14_1 SELEX - 125667864 125667877 4.0E-06 TGAATGTGCAGGGA 14 IRF7_IRF_DBD_dimeric_14_1 SELEX - 125663321 125663334 1.0E-06 GAGAAAATGAAAGT 14 SPIC_ETS_full_monomeric_14_1 SELEX + 125663248 125663261 1.0E-06 TAAAACAGGAAGCA 14 FOXF2_MA0030.1 JASPAR + 125663179 125663192 2.0E-06 GGACCATAAACAAT 14 IRF8_IRF_full_dimeric_14_1 SELEX - 125663321 125663334 9.0E-06 GAGAAAATGAAAGT 14 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 6.0E-06 GTCACGTGAT 10 POU1F1_POU_DBD_monomeric_14_1 SELEX + 125663279 125663292 7.0E-06 ATGATTCAAATTAC 14 NFKB1_MA0105.1 JASPAR - 125667857 125667867 9.0E-06 GGGAATTTCCC 11 SOX8_HMG_DBD_dimeric_14_1 SELEX - 125667864 125667877 2.0E-06 TGAATGTGCAGGGA 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 125663183 125663196 7.0E-06 AAAAATTGTTTATG 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 125663248 125663261 4.0E-06 TAAAACAGGAAGCA 14 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 125667856 125667868 5.0E-06 TGGGAAATTCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 125667856 125667868 6.0E-06 AGGGAATTTCCCA 13 IRF1_MA0050.1 JASPAR - 125663321 125663332 1.0E-06 GAAAATGAAAGT 12 USF1_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 USF1_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 2.0E-06 GTCACGTGAT 10 REL_MA0101.1 JASPAR - 125667858 125667867 2.0E-06 GGGAATTTCC 10 POU3F3_POU_DBD_monomeric_13_1 SELEX + 125663279 125663291 6.0E-06 ATGATTCAAATTA 13 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 125667668 125667676 5.0E-06 CCCACTTAA 9 Foxq1_MA0040.1 JASPAR - 125663183 125663193 1.0E-06 AATTGTTTATG 11 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 125667110 125667126 9.0E-06 GGGTTCGTTAGGGGTCA 17 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 125667783 125667792 2.0E-06 ATCACGTGAC 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 125667783 125667792 3.0E-06 GTCACGTGAT 10 RELA_MA0107.1 JASPAR - 125667858 125667867 1.0E-06 GGGAATTTCC 10 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 125663380 125663395 9.0E-06 TGGCATTTTAAAATCA 16 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 2.0E-06 GTCACGTGAT 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 SRY_MA0084.1 JASPAR + 125663184 125663192 5.0E-06 ATAAACAAT 9 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 2.0E-06 GTCACGTGAT 10 TFEB_bHLH_full_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 125667783 125667792 5.0E-06 GTCACGTGAT 10 SOX9_HMG_full_dimeric_16_3 SELEX - 125667863 125667878 2.0E-06 ATGAATGTGCAGGGAA 16 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 125667803 125667818 3.0E-06 CTCCCACAGTGCTCCG 16 IRF9_IRF_full_trimeric_15_1 SELEX - 125663321 125663335 4.0E-06 AGAGAAAATGAAAGT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 125667075 125667089 1.0E-06 GAAAAGGGAGAGTGA 15 MLXIPL_bHLH_full_dimeric_10_1 SELEX + 125667783 125667792 5.0E-06 ATCACGTGAC 10 MLXIPL_bHLH_full_dimeric_10_1 SELEX - 125667783 125667792 1.0E-06 GTCACGTGAT 10 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 125663244 125663252 9.0E-06 CACATAAAA 9 MAX_MA0058.1 JASPAR + 125667782 125667791 8.0E-06 GATCACGTGA 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 1.0E-06 ATCACGTGAC 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 9.0E-06 GTCACGTGAT 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 2.0E-06 ATCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 4.0E-06 GTCACGTGAT 10 Tp53_p53l_DBD_dimeric_17_1 SELEX + 125668070 125668086 3.0E-06 ACAAGAAGAAAACATGT 17 Tp53_p53l_DBD_dimeric_17_1 SELEX + 125668081 125668097 6.0E-06 ACATGTATTTGGCAGGC 17 SPI1_ETS_full_monomeric_14_1 SELEX + 125663248 125663261 4.0E-06 TAAAACAGGAAGCA 14 IRF3_IRF_full_trimeric_21_1 SELEX - 125663320 125663340 9.0E-06 TAATAAGAGAAAATGAAAGTA 21 MLX_bHLH_full_dimeric_10_1 SELEX + 125667783 125667792 2.0E-06 ATCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX - 125667783 125667792 1.0E-06 GTCACGTGAT 10 Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 125663184 125663191 5.0E-06 ATAAACAA 8 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 125668077 125668090 5.0E-06 GAAAACATGTATTT 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 125668077 125668090 3.0E-06 AAATACATGTTTTC 14 ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 125667783 125667792 3.0E-06 ATCACGTGAC 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 125667783 125667792 2.0E-06 GTCACGTGAT 10 TBX1_TBX_DBD_dimeric_20_1 SELEX - 125667980 125667999 1.0E-06 GAGTGTGAAGAAGAATGTGA 20 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 125667783 125667792 3.0E-06 ATCACGTGAC 10 IRF2_MA0051.1 JASPAR - 125663316 125663333 2.0E-06 AGAAAATGAAAGTATTTA 18 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 125668077 125668090 7.0E-06 GAAAACATGTATTT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 125668077 125668090 3.0E-06 AAATACATGTTTTC 14 V_DMRT4_01_M01149 TRANSFAC - 125667963 125667975 4.0E-06 GATGTATCAGATT 13 V_NFAT_Q4_01_M00935 TRANSFAC - 125663206 125663215 2.0E-06 CTGGAAAATT 10 V_FOXP1_01_M00987 TRANSFAC + 125663319 125663338 6.0E-06 ATACTTTCATTTTCTCTTAT 20 V_CEBPG_Q6_M00622 TRANSFAC + 125668058 125668070 1.0E-06 CCCATTACAAAAA 13 V_NFKAPPAB65_01_M00052 TRANSFAC - 125667858 125667867 1.0E-06 GGGAATTTCC 10 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 125668035 125668048 3.0E-06 TGACATCTTTGTAA 14 V_NFKB_C_M00208 TRANSFAC - 125667857 125667868 2.0E-06 AGGGAATTTCCC 12 V_SPI1_01_M01203 TRANSFAC + 125663248 125663264 5.0E-06 TAAAACAGGAAGCACAA 17 V_USF_Q6_M00187 TRANSFAC - 125667783 125667792 7.0E-06 GTCACGTGAT 10 V_NFKB_Q6_01_M00774 TRANSFAC + 125667853 125667868 0.0E+00 TGATGGGAAATTCCCT 16 V_ATF5_01_M01295 TRANSFAC - 125667077 125667087 6.0E-06 ACTCTCCCTTT 11 V_STAT3STAT3_Q3_M01220 TRANSFAC + 125667852 125667865 5.0E-06 TTGATGGGAAATTC 14 V_ARNT_02_M00539 TRANSFAC + 125667778 125667797 2.0E-06 CCCCGATCACGTGACAAGGG 20 V_ARNT_02_M00539 TRANSFAC - 125667778 125667797 2.0E-06 CCCTTGTCACGTGATCGGGG 20 V_HOXA13_02_M01297 TRANSFAC + 125663245 125663253 7.0E-06 ACATAAAAC 9 V_SATB1_Q3_M01723 TRANSFAC + 125668116 125668131 9.0E-06 TTTATTAAAGAGAAAA 16 V_RELBP52_01_M01239 TRANSFAC - 125667858 125667867 7.0E-06 GGGAATTTCC 10 V_IRF_Q6_01_M00972 TRANSFAC - 125663322 125663332 2.0E-06 GAAAATGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 125663319 125663334 0.0E+00 GAGAAAATGAAAGTAT 16 V_NFAT3_Q3_M01734 TRANSFAC + 125663205 125663214 7.0E-06 TAATTTTCCA 10 V_POU2F3_01_M01476 TRANSFAC + 125663278 125663293 1.0E-05 TATGATTCAAATTACA 16 V_FOXO3A_Q1_M01137 TRANSFAC + 125663183 125663194 9.0E-06 CATAAACAATTT 12 V_P50P50_Q3_M01223 TRANSFAC - 125667857 125667869 2.0E-06 CAGGGAATTTCCC 13 V_ARNT_01_M00236 TRANSFAC - 125667780 125667795 2.0E-06 CTTGTCACGTGATCGG 16 V_SOX11_04_M02899 TRANSFAC - 125663182 125663195 3.0E-06 AAAATTGTTTATGG 14 V_FOXJ1_03_M02750 TRANSFAC + 125663181 125663196 2.0E-06 ACCATAAACAATTTTT 16 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 125667855 125667866 0.0E+00 GGAATTTCCCAT 12 V_AREB6_04_M00415 TRANSFAC + 125668134 125668142 8.0E-06 CTGTTTCTA 9 V_PU1_Q4_M01172 TRANSFAC - 125663249 125663267 3.0E-06 CTATTGTGCTTCCTGTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 125668067 125668085 3.0E-06 CATGTTTTCTTCTTGTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 125668104 125668122 7.0E-06 ACATCTCACTTCTTTATTA 19 V_FOXP3_01_M01599 TRANSFAC + 125663184 125663191 5.0E-06 ATAAACAA 8 V_WT1_Q6_01_M02036 TRANSFAC + 125667375 125667384 4.0E-06 CGCCCCCGCC 10 V_CP2_02_M00947 TRANSFAC + 125667905 125667919 1.0E-06 GCTGGTTTGAGCGAG 15 V_POU3F2_01_M00463 TRANSFAC + 125663315 125663328 8.0E-06 CTAAATACTTTCAT 14 V_ZFP105_03_M02827 TRANSFAC + 125668062 125668076 8.0E-06 TTACAAAAACAAGAA 15 V_SREBP1_01_M00220 TRANSFAC + 125667782 125667792 1.0E-06 GATCACGTGAC 11 V_SREBP1_01_M00220 TRANSFAC - 125667783 125667793 6.0E-06 TGTCACGTGAT 11 V_TEF_Q6_M00672 TRANSFAC - 125668062 125668073 6.0E-06 TTGTTTTTGTAA 12 V_CREL_01_M00053 TRANSFAC - 125667858 125667867 2.0E-06 GGGAATTTCC 10 V_KROX_Q6_M00982 TRANSFAC + 125667373 125667386 3.0E-06 CCCGCCCCCGCCCT 14 V_IRX4_01_M01410 TRANSFAC + 125668076 125668092 5.0E-06 AGAAAACATGTATTTGG 17 V_NFKB_Q6_M00194 TRANSFAC + 125667855 125667868 6.0E-06 ATGGGAAATTCCCT 14 V_NFKB_Q6_M00194 TRANSFAC - 125667856 125667869 6.0E-06 CAGGGAATTTCCCA 14 V_EGR1_Q6_M01873 TRANSFAC - 125667374 125667383 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC + 125663324 125663338 3.0E-06 TTCATTTTCTCTTAT 15 V_ISRE_01_M00258 TRANSFAC + 125663320 125663334 8.0E-06 TACTTTCATTTTCTC 15 V_USF_02_M00122 TRANSFAC + 125667781 125667794 6.0E-06 CGATCACGTGACAA 14 V_USF_02_M00122 TRANSFAC - 125667781 125667794 6.0E-06 TTGTCACGTGATCG 14 V_SP1SP3_Q4_M01219 TRANSFAC + 125667589 125667599 5.0E-06 CCGCCTCCTCC 11 V_USF_01_M00121 TRANSFAC + 125667781 125667794 5.0E-06 CGATCACGTGACAA 14 V_USF_01_M00121 TRANSFAC - 125667781 125667794 5.0E-06 TTGTCACGTGATCG 14 V_SPIB_01_M01204 TRANSFAC + 125663248 125663264 9.0E-06 TAAAACAGGAAGCACAA 17 V_MEF2_Q6_01_M00941 TRANSFAC + 125663297 125663308 7.0E-06 TGCTTTATTAAG 12 V_IRX3_01_M01318 TRANSFAC - 125668075 125668091 4.0E-06 CAAATACATGTTTTCTT 17 V_IRX3_01_M01318 TRANSFAC + 125668076 125668092 4.0E-06 AGAAAACATGTATTTGG 17 V_IRX5_01_M01472 TRANSFAC - 125668075 125668091 3.0E-06 CAAATACATGTTTTCTT 17 V_IRX5_01_M01472 TRANSFAC + 125668076 125668092 4.0E-06 AGAAAACATGTATTTGG 17 V_ICSBP_Q6_M00699 TRANSFAC - 125663320 125663331 1.0E-06 AAAATGAAAGTA 12 V_FOXO1_Q5_M01216 TRANSFAC + 125668066 125668074 8.0E-06 AAAAACAAG 9 V_ELK1_01_M00007 TRANSFAC + 125663249 125663264 0.0E+00 AAAACAGGAAGCACAA 16 V_HOXD9_Q2_M01834 TRANSFAC + 125663243 125663252 1.0E-06 ACACATAAAA 10 V_FREAC2_01_M00290 TRANSFAC + 125663179 125663194 6.0E-06 GGACCATAAACAATTT 16 V_USF_Q6_01_M00796 TRANSFAC + 125667782 125667793 5.0E-06 GATCACGTGACA 12 V_ZFP105_04_M02931 TRANSFAC + 125663196 125663212 6.0E-06 TCGCTCAAATAATTTTC 17 V_IRX3_02_M01485 TRANSFAC - 125668075 125668091 1.0E-05 CAAATACATGTTTTCTT 17 V_IRX3_02_M01485 TRANSFAC + 125668076 125668092 4.0E-06 AGAAAACATGTATTTGG 17 V_CEBPA_01_M00116 TRANSFAC + 125668059 125668072 3.0E-06 CCATTACAAAAACA 14 V_STRA13_01_M00985 TRANSFAC + 125667781 125667794 9.0E-06 CGATCACGTGACAA 14 V_STRA13_01_M00985 TRANSFAC - 125667781 125667794 1.0E-06 TTGTCACGTGATCG 14 V_TFEB_01_M01768 TRANSFAC + 125667783 125667792 2.0E-06 ATCACGTGAC 10 V_TFEB_01_M01768 TRANSFAC - 125667783 125667792 2.0E-06 GTCACGTGAT 10 V_ESRRA_04_M02852 TRANSFAC + 125667115 125667131 4.0E-06 CGTTAGGGGTCAGAGGC 17 V_FPM315_01_M01587 TRANSFAC - 125667569 125667580 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 125667572 125667583 0.0E+00 GAGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 125667594 125667605 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 125667597 125667608 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 125667600 125667611 3.0E-06 GGAGGAGGAGGA 12 V_FOXO3_01_M00477 TRANSFAC - 125668063 125668076 4.0E-06 TTCTTGTTTTTGTA 14 V_EGR1_06_M02744 TRANSFAC + 125667373 125667386 8.0E-06 CCCGCCCCCGCCCT 14 V_IRX2_01_M01405 TRANSFAC - 125668075 125668091 3.0E-06 CAAATACATGTTTTCTT 17 V_IRX2_01_M01405 TRANSFAC + 125668076 125668092 6.0E-06 AGAAAACATGTATTTGG 17 V_IRF1_Q6_01_M01881 TRANSFAC + 125663320 125663333 0.0E+00 TACTTTCATTTTCT 14 V_IRF1_Q6_01_M01881 TRANSFAC + 125663326 125663339 6.0E-06 CATTTTCTCTTATT 14 V_PBX_Q3_M00998 TRANSFAC + 125667850 125667861 5.0E-06 GATTGATGGGAA 12 V_NFKAPPAB_01_M00054 TRANSFAC + 125667857 125667866 7.0E-06 GGGAAATTCC 10 V_NFKAPPAB_01_M00054 TRANSFAC - 125667858 125667867 1.0E-06 GGGAATTTCC 10 V_NFE2_Q6_M02104 TRANSFAC - 125663234 125663249 6.0E-06 TATGTGTCAGCACTCA 16 V_FOXO1_01_M00473 TRANSFAC + 125663183 125663192 1.0E-06 CATAAACAAT 10 V_FOXO1_01_M00473 TRANSFAC + 125668065 125668074 9.0E-06 CAAAAACAAG 10 V_PIT1_Q6_M00802 TRANSFAC + 125668111 125668128 2.0E-06 ACTTCTTTATTAAAGAGA 18 V_FOXO4_01_M00472 TRANSFAC + 125663184 125663194 1.0E-06 ATAAACAATTT 11 V_CP2_01_M00072 TRANSFAC - 125667906 125667916 2.0E-06 GCTCAAACCAG 11 V_CMAF_01_M01070 TRANSFAC + 125663233 125663251 4.0E-06 ATGAGTGCTGACACATAAA 19 V_SOX5_07_M02909 TRANSFAC - 125663182 125663198 1.0E-06 CGAAAAATTGTTTATGG 17 V_TAACC_B_M00331 TRANSFAC - 125663192 125663214 8.0E-06 TGGAAAATTATTTGAGCGAAAAA 23 V_IRXB3_01_M01377 TRANSFAC - 125668075 125668091 1.0E-06 CAAATACATGTTTTCTT 17 V_NANOG_02_M01247 TRANSFAC + 125668062 125668081 7.0E-06 TTACAAAAACAAGAAGAAAA 20

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