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TRAPPC4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51399 trafficking protein particle complex 4 chr11 + 118884240 - 118889740 118889240 Transcription Factor Binding Sites   Download all TFBS in the TRAPPC4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 118892066 118892076 2.0E-06 AAGGTGTTAAG 11 IRF7_IRF_DBD_dimeric_14_1 SELEX + 118892083 118892096 2.0E-06 TCCAAAATGAAATT 14 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 118893902 118893919 9.0E-06 GCGGATCAGCTGAGGTCA 18 ELF4_ETS_full_monomeric_12_1 SELEX - 118889100 118889111 6.0E-06 GCCCCGGAAGTA 12 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 118889162 118889172 5.0E-06 AGCCTGAGGCG 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 118889162 118889172 4.0E-06 CGCCTCAGGCT 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 118889162 118889172 9.0E-06 AGCCTGAGGCG 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 118889162 118889172 2.0E-06 CGCCTCAGGCT 11 MEF2B_MADS_full_dimeric_12_1 SELEX - 118889509 118889520 6.0E-06 ACTAAAAATCGC 12 ETV2_ETS_DBD_monomeric_11_1 SELEX - 118892042 118892052 2.0E-06 AACAGGAAATA 11 HMX3_homeodomain_DBD_monomeric_11_1 SELEX - 118892070 118892080 4.0E-06 AACACTTAACA 11 NKX3-1_homeodomain_full_monomeric_9_1 SELEX - 118893971 118893979 5.0E-06 CCCACTTAA 9 SOX14_HMG_DBD_dimeric_15_1 SELEX + 118889474 118889488 9.0E-06 CTGAATACCAGTTTC 15 NFATC1_NFAT_full_dimeric_15_1 SELEX + 118892081 118892095 6.0E-06 TTTCCAAAATGAAAT 15 TBX21_TBX_full_monomeric_10_1 SELEX + 118892066 118892075 4.0E-06 AAGGTGTTAA 10 TBX2_TBX_full_monomeric_11_1 SELEX + 118892066 118892076 3.0E-06 AAGGTGTTAAG 11 ERF_ETS_DBD_monomeric_10_1 SELEX + 118889177 118889186 9.0E-06 ACAGGAAGTG 10 FEV_MA0156.1 JASPAR - 118892043 118892050 1.0E-05 CAGGAAAT 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 118889162 118889172 8.0E-06 AGCCTGAGGCG 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 118889162 118889172 5.0E-06 CGCCTCAGGCT 11 ELF5_ETS_full_monomeric_11_1 SELEX - 118892042 118892052 9.0E-06 AACAGGAAATA 11 TBX20_TBX_DBD_monomeric_15_1 SELEX + 118892063 118892077 3.0E-06 TGGAAGGTGTTAAGT 15 GABPA_ETS_full_monomeric_10_1 SELEX - 118889100 118889109 7.0E-06 CCCGGAAGTA 10 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 118892070 118892080 3.0E-06 AACACTTAACA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 118889162 118889172 7.0E-06 AGCCTGAGGCG 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 118889162 118889172 2.0E-06 CGCCTCAGGCT 11 Sox1_HMG_DBD_dimeric_15_2 SELEX + 118889474 118889488 8.0E-06 CTGAATACCAGTTTC 15 IRF2_MA0051.1 JASPAR + 118890102 118890119 8.0E-06 GAAAAACGCAACCGATCC 18 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 118892070 118892080 8.0E-06 AACACTTAACA 11 V_ELF5_02_M01980 TRANSFAC - 118889100 118889109 2.0E-06 CCCGGAAGTA 10 V_ELF5_03_M02057 TRANSFAC - 118889100 118889109 5.0E-06 CCCGGAAGTA 10 V_MEQ_01_M02049 TRANSFAC - 118886152 118886160 2.0E-06 AACACACAT 9 V_CEBPG_Q6_M00622 TRANSFAC - 118890075 118890087 7.0E-06 ACGATTTAAGAAA 13 V_E2A_Q6_01_M02088 TRANSFAC - 118889359 118889371 3.0E-06 AGCCACCTGCTGC 13 V_TEL1_02_M02070 TRANSFAC - 118889100 118889109 8.0E-06 CCCGGAAGTA 10 V_HMGIY_Q3_M01010 TRANSFAC + 118892037 118892051 3.0E-06 AATGCTATTTCCTGT 15 V_ETS_B_M00340 TRANSFAC - 118892039 118892052 7.0E-06 AACAGGAAATAGCA 14 V_NERF_01_M01976 TRANSFAC - 118889100 118889109 3.0E-06 CCCGGAAGTA 10 V_ESE1_01_M01977 TRANSFAC - 118889100 118889109 3.0E-06 CCCGGAAGTA 10 V_ESE1_01_M01977 TRANSFAC - 118892042 118892051 8.0E-06 ACAGGAAATA 10 V_AR_Q6_01_M01996 TRANSFAC + 118893938 118893952 4.0E-06 ATATATGTTGTTCTT 15 V_GABP_B_M00341 TRANSFAC + 118889177 118889188 4.0E-06 ACAGGAAGTGGA 12 V_ELF1_01_M01975 TRANSFAC - 118889100 118889109 3.0E-06 CCCGGAAGTA 10 V_IRF3_05_M02767 TRANSFAC + 118890102 118890115 5.0E-06 GAAAAACGCAACCG 14 V_GABPA_04_M02858 TRANSFAC - 118889165 118889180 2.0E-06 CTGTCTTCCGCCTCAG 16 V_NKX24_01_M01350 TRANSFAC - 118892068 118892083 4.0E-06 AAAAACACTTAACACC 16 V_PU1_Q4_M01172 TRANSFAC - 118889174 118889192 1.0E-06 AGAATCCACTTCCTGTCTT 19 V_CETS1P54_02_M00074 TRANSFAC - 118892041 118892053 9.0E-06 CAACAGGAAATAG 13 V_ELF2_02_M02054 TRANSFAC - 118889100 118889109 2.0E-06 CCCGGAAGTA 10 V_ETS_Q4_M00771 TRANSFAC - 118889178 118889189 0.0E+00 ATCCACTTCCTG 12 V_SOX13_03_M02797 TRANSFAC - 118893939 118893954 5.0E-06 TGAAGAACAACATATA 16 V_HELIOSA_02_M01004 TRANSFAC - 118892079 118892089 2.0E-06 TTTTGGAAAAA 11 V_FKLF_Q5_M01837 TRANSFAC + 118889712 118889721 2.0E-06 GGGGTGGGAG 10 V_NKX26_01_M01322 TRANSFAC - 118892068 118892083 9.0E-06 AAAAACACTTAACACC 16 V_IRF2_01_M00063 TRANSFAC - 118889596 118889608 0.0E+00 GATAACTGAAAGT 13 V_KROX_Q6_M00982 TRANSFAC - 118889706 118889719 5.0E-06 CCCACCCCCGCACC 14 V_AMEF2_Q6_M00403 TRANSFAC - 118889506 118889523 2.0E-06 CACACTAAAAATCGCCAT 18 V_HOXA3_07_M02869 TRANSFAC - 118892033 118892046 5.0E-06 AAATAGCATTAAGG 14 V_NKX52_01_M01315 TRANSFAC - 118892067 118892083 4.0E-06 AAAAACACTTAACACCT 17 V_EHF_02_M01974 TRANSFAC - 118889100 118889109 2.0E-06 CCCGGAAGTA 10 V_ELF5_01_M01197 TRANSFAC - 118892042 118892052 3.0E-06 AACAGGAAATA 11 V_GADP_01_M01258 TRANSFAC + 118889100 118889111 7.0E-06 TACTTCCGGGGC 12 V_TEL2_Q6_M00678 TRANSFAC - 118889178 118889187 6.0E-06 CCACTTCCTG 10 V_CETS1P54_01_M00032 TRANSFAC + 118889177 118889186 9.0E-06 ACAGGAAGTG 10 V_CETS1P54_01_M00032 TRANSFAC - 118892042 118892051 1.0E-05 ACAGGAAATA 10 V_TEL1_01_M01993 TRANSFAC - 118889100 118889109 8.0E-06 CCCGGAAGTA 10 V_TBX5_01_M01019 TRANSFAC + 118892065 118892076 5.0E-06 GAAGGTGTTAAG 12 V_ELF4_01_M01979 TRANSFAC - 118889100 118889109 6.0E-06 CCCGGAAGTA 10 V_NKX32_02_M01482 TRANSFAC - 118892068 118892084 4.0E-06 GAAAAACACTTAACACC 17 V_IRF7_01_M00453 TRANSFAC + 118892082 118892099 3.0E-06 TTCCAAAATGAAATTTGA 18 V_SP4_Q5_M01273 TRANSFAC - 118889450 118889460 7.0E-06 GCCCCTCCCCG 11 V_ELF1_Q6_M00746 TRANSFAC - 118892043 118892054 5.0E-06 GCAACAGGAAAT 12 V_EHF_03_M02052 TRANSFAC - 118889100 118889109 1.0E-06 CCCGGAAGTA 10 V_GABPBETA_Q3_M01876 TRANSFAC + 118889177 118889187 5.0E-06 ACAGGAAGTGG 11 V_FAC1_01_M00456 TRANSFAC - 118893939 118893952 2.0E-06 AAGAACAACATATA 14 V_CEBPA_01_M00116 TRANSFAC - 118890128 118890141 4.0E-06 TTATTACCTAAAAT 14 V_CAAT_C_M00200 TRANSFAC - 118889627 118889651 9.0E-06 ACCAACACACGCTCATCGTGTAGCT 25 V_TFIIA_Q6_M00707 TRANSFAC - 118888792 118888803 4.0E-06 TATTTGAGGACC 12 V_NKX22_01_M00485 TRANSFAC + 118892072 118892081 2.0E-06 TTAAGTGTTT 10 V_FPM315_01_M01587 TRANSFAC + 118889383 118889394 6.0E-06 GCGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 118889386 118889397 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 118889389 118889400 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 118889392 118889403 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 118889395 118889406 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 118889398 118889409 3.0E-06 GGAGGAGGAGGA 12 V_E47_01_M00002 TRANSFAC + 118889359 118889373 8.0E-06 GCAGCAGGTGGCTGC 15 V_ESE1_02_M02055 TRANSFAC - 118889100 118889109 2.0E-06 CCCGGAAGTA 10 V_T3RBETA_Q6_01_M02119 TRANSFAC - 118893901 118893917 0.0E+00 GGATCAGCTGAGGTCAG 17 V_ETS1_B_M00339 TRANSFAC + 118889177 118889191 6.0E-06 ACAGGAAGTGGATTC 15 V_EGR1_06_M02744 TRANSFAC - 118889706 118889719 9.0E-06 CCCACCCCCGCACC 14 V_HSF_Q6_M00641 TRANSFAC + 118893951 118893963 3.0E-06 TTCAAGCAGTTTC 13 V_IRF1_Q6_01_M01881 TRANSFAC + 118889595 118889608 3.0E-06 AACTTTCAGTTATC 14 V_PR_02_M00957 TRANSFAC + 118893931 118893957 8.0E-06 TTCCATGATATATGTTGTTCTTCAAGC 27 V_ELF_02_M02053 TRANSFAC - 118889100 118889109 3.0E-06 CCCGGAAGTA 10 V_BARHL2_01_M01446 TRANSFAC - 118892069 118892084 8.0E-06 GAAAAACACTTAACAC 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 118889410 118889423 4.0E-06 GGCTGGGGTGGGGC 14 V_AP2ALPHA_03_M01047 TRANSFAC + 118889160 118889174 7.0E-06 CTAGCCTGAGGCGGA 15 V_AP2ALPHA_03_M01047 TRANSFAC - 118889160 118889174 7.0E-06 TCCGCCTCAGGCTAG 15 V_TCFAP2E_03_M02822 TRANSFAC - 118889160 118889174 4.0E-06 TCCGCCTCAGGCTAG 15 V_FEV_01_M02269 TRANSFAC - 118892043 118892050 1.0E-05 CAGGAAAT 8 V_ELF4_02_M02056 TRANSFAC - 118889100 118889109 7.0E-06 CCCGGAAGTA 10 V_ESE1_Q3_M01214 TRANSFAC - 118889100 118889109 2.0E-06 CCCGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.