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NKX3-1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
4824 NK3 homeobox 1 chr8 -23539902 - 23545450 23540402 NKX3-1_homeodomain_full_monomeric_9_1
V_NKX31_02_M02782
V_NKX3A_01_M00451
V_NKX3A_02_M01383

Transcription Factor Binding Sites

 
Download all TFBS in the NKX3-1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 23539326 23539343 2.0E-06 TGAGTAAATATGTTTATT 18
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 23539326 23539343 3.0E-06 AATAAACATATTTACTCA 18
MYBL2_MYB_DBD_dimeric_16_1 SELEX + 23539377 23539392 9.0E-06 AAAGTTAGAGACGTTT 16
IRF7_IRF_DBD_dimeric_14_1 SELEX - 23540449 23540462 3.0E-06 CGGAAAGTGAAAGC 14
IRF8_IRF_full_dimeric_14_1 SELEX - 23540449 23540462 8.0E-06 CGGAAAGTGAAAGC 14
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 23539326 23539336 2.0E-06 TGAGTAAATAT 11
EWSR1-FLI1_MA0149.1 JASPAR - 23540616 23540633 9.0E-06 GGAACTGGGGAAGGAATC 18
IRF1_MA0050.1 JASPAR - 23540449 23540460 0.0E+00 GAAAGTGAAAGC 12
Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 23540550 23540566 9.0E-06 GGGTCACCTGGGGCTCA 17
Gata1_MA0035.2 JASPAR - 23539231 23539241 6.0E-06 AGAGATAAGGG 11
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 23540447 23540461 0.0E+00 GGAAAGTGAAAGCGG 15
Pou5f1_MA0142.1 JASPAR + 23539347 23539361 6.0E-06 CATTCATTTGCTAAG 15
IRF3_IRF_full_trimeric_21_1 SELEX - 23540448 23540468 3.0E-06 GGGAGGCGGAAAGTGAAAGCG 21
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 23539326 23539336 2.0E-06 TGAGTAAATAT 11
IRF2_MA0051.1 JASPAR - 23540444 23540461 0.0E+00 GGAAAGTGAAAGCGGTGC 18
V_POU3F3_01_M03090 TRANSFAC - 23539338 23539354 6.0E-06 AATGAATGCGTAATAAA 17
V_XFD1_01_M00267 TRANSFAC + 23539326 23539339 5.0E-06 TGAGTAAATATGTT 14
V_GATA2_02_M00348 TRANSFAC - 23539232 23539241 7.0E-06 AGAGATAAGG 10
V_ZFX_01_M01593 TRANSFAC + 23540489 23540504 8.0E-06 GAGCGGGCCGCGCCGC 16
V_COE1_Q6_M01871 TRANSFAC + 23540607 23540620 5.0E-06 TCCCTAGGGGATTC 14
V_POU5F1_02_M02245 TRANSFAC + 23539347 23539361 6.0E-06 CATTCATTTGCTAAG 15
V_OCTAMER_01_M01324 TRANSFAC - 23539338 23539354 6.0E-06 AATGAATGCGTAATAAA 17
V_IRF_Q6_01_M00972 TRANSFAC - 23539281 23539291 1.0E-06 AAAAGTGAAAT 11
V_IRF_Q6_01_M00972 TRANSFAC - 23540450 23540460 0.0E+00 GAAAGTGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 23539278 23539293 1.0E-06 AAAAAAGTGAAATGTA 16
V_IRF2_Q6_M01882 TRANSFAC - 23540447 23540462 1.0E-06 CGGAAAGTGAAAGCGG 16
V_AP4_Q6_M00176 TRANSFAC + 23540173 23540182 2.0E-06 CTCAGCTGGT 10
V_PPAR_DR1_Q2_M00763 TRANSFAC + 23539399 23539411 7.0E-06 TGAACTTTCTCCC 13
V_BRN2_01_M00145 TRANSFAC - 23539337 23539352 6.0E-06 TGAATGCGTAATAAAC 16
V_HNF3G_Q4_M02015 TRANSFAC - 23539252 23539259 7.0E-06 TGTTTGTT 8
V_XFD3_01_M00269 TRANSFAC + 23539246 23539259 6.0E-06 TGAGTGAACAAACA 14
V_IRF2_01_M00063 TRANSFAC - 23540449 23540461 2.0E-06 GGAAAGTGAAAGC 13
V_IRX4_01_M01410 TRANSFAC - 23539190 23539206 6.0E-06 TGCTAACATGTAACTTT 17
V_AP2BETA_Q3_M01858 TRANSFAC - 23540370 23540385 4.0E-06 GCCGCGGCCCGGGGAG 16
V_AP4_Q5_M00175 TRANSFAC + 23540173 23540182 1.0E-06 CTCAGCTGGT 10
V_PPARG_03_M00528 TRANSFAC - 23539399 23539415 9.0E-06 AGTAGGGAGAAAGTTCA 17
V_GATA1_09_M02254 TRANSFAC - 23539231 23539241 6.0E-06 AGAGATAAGGG 11
V_PAX8_01_M00717 TRANSFAC + 23539316 23539330 8.0E-06 GAGTGAAGAGTGAGT 15
V_IRX3_01_M01318 TRANSFAC - 23539190 23539206 4.0E-06 TGCTAACATGTAACTTT 17
V_IRX3_01_M01318 TRANSFAC + 23539191 23539207 9.0E-06 AAGTTACATGTTAGCAG 17
V_OCT4_02_M01124 TRANSFAC + 23539348 23539362 5.0E-06 ATTCATTTGCTAAGA 15
V_IRX5_01_M01472 TRANSFAC - 23539190 23539206 4.0E-06 TGCTAACATGTAACTTT 17
V_ICSBP_Q6_M00699 TRANSFAC - 23540448 23540459 3.0E-06 AAAGTGAAAGCG 12
V_GR_Q6_02_M01836 TRANSFAC - 23539211 23539223 4.0E-06 AATTCTGTTCTCT 13
V_PTF1BETA_Q6_M00657 TRANSFAC - 23539397 23539410 1.0E-05 GGAGAAAGTTCAAC 14
V_ZFP105_04_M02931 TRANSFAC + 23539325 23539341 6.0E-06 GTGAGTAAATATGTTTA 17
V_IRX3_02_M01485 TRANSFAC - 23539190 23539206 5.0E-06 TGCTAACATGTAACTTT 17
V_TAL1_01_M01591 TRANSFAC + 23539229 23539241 4.0E-06 CACCCTTATCTCT 13
V_CNOT3_01_M01253 TRANSFAC + 23540494 23540503 4.0E-06 GGCCGCGCCG 10
V_CNOT3_01_M01253 TRANSFAC + 23540526 23540535 4.0E-06 GGCCGCGCCG 10
V_FPM315_01_M01587 TRANSFAC - 23540205 23540216 7.0E-06 GAGGGAGGACGC 12
V_NRF2_Q4_M00821 TRANSFAC - 23539296 23539308 5.0E-06 CTCCTTAGTCATG 13
V_MEF3_B_M00319 TRANSFAC + 23539972 23539984 6.0E-06 GGCTCAGGGTTCA 13
V_IRX2_01_M01405 TRANSFAC - 23539190 23539206 3.0E-06 TGCTAACATGTAACTTT 17
V_IRF1_Q6_01_M01881 TRANSFAC + 23539279 23539292 1.0E-06 ACATTTCACTTTTT 14
V_IRF1_Q6_01_M01881 TRANSFAC + 23540448 23540461 0.0E+00 CGCTTTCACTTTCC 14
V_EWSR1FLI1_01_M02252 TRANSFAC - 23540616 23540633 9.0E-06 GGAACTGGGGAAGGAATC 18
V_IRF1_01_M00062 TRANSFAC - 23540449 23540461 9.0E-06 GGAAAGTGAAAGC 13
V_TFE_Q6_M01029 TRANSFAC - 23539293 23539300 1.0E-05 TCATGTGA 8
V_HOXA10_01_M01464 TRANSFAC - 23539333 23539348 9.0E-06 TGCGTAATAAACATAT 16
V_MAFK_04_M02880 TRANSFAC - 23539280 23539294 3.0E-06 GAAAAAAGTGAAATG 15
V_GATA1_02_M00126 TRANSFAC - 23539230 23539243 2.0E-06 AAAGAGATAAGGGT 14
V_GATA6_04_M02757 TRANSFAC - 23539228 23539244 1.0E-06 TAAAGAGATAAGGGTGG 17
V_NFYA_Q5_M02106 TRANSFAC - 23540505 23540518 3.0E-06 CGGCCAATGGGAGG 14
V_NFYA_Q5_M02106 TRANSFAC - 23540533 23540546 1.0E-05 CGGCCAATCCGCGG 14
V_IRXB3_01_M01377 TRANSFAC - 23539190 23539206 5.0E-06 TGCTAACATGTAACTTT 17
V_PPARG_01_M00512 TRANSFAC - 23539395 23539415 5.0E-06 AGTAGGGAGAAAGTTCAACCA 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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