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RNF223 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 401934 ring finger protein 223 chr1 - 1009187 - 1014687 1009687 Transcription Factor Binding Sites   Download all TFBS in the RNF223 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 1004739 1004750 3.0E-06 GCCACGCCCCCA 12 SP3_C2H2_DBD_monomeric_11_1 SELEX - 1004740 1004750 3.0E-06 GCCACGCCCCC 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 1005572 1005582 5.0E-06 GCCACACCCAC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 1004740 1004750 1.0E-06 GCCACGCCCCC 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 1009709 1009720 1.0E-05 GGTATAAATAGA 12 ESR2_MA0258.1 JASPAR + 1009195 1009212 2.0E-06 ACAGGTCACTGTGACCAC 18 RFX4_RFX_DBD_dimeric_16_1 SELEX + 1004775 1004790 1.0E-06 CGTCGCCATGGTGACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 1004775 1004790 1.0E-06 GGTCACCATGGCGACG 16 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 1004738 1004751 2.0E-06 GGCCACGCCCCCAC 14 TBP_MA0108.2 JASPAR - 1009705 1009719 2.0E-06 GTATAAATAGACCTG 15 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 1009709 1009720 6.0E-06 GGTATAAATAGA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 1009191 1009202 7.0E-06 TGACCTGTGTCA 12 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 1009246 1009256 8.0E-06 TGCCCCAGGCA 11 KLF13_C2H2_full_monomeric_18_1 SELEX - 1004735 1004752 5.0E-06 GGGCCACGCCCCCACCTG 18 Klf4_MA0039.2 JASPAR + 1005573 1005582 2.0E-06 TGGGTGTGGC 10 Klf4_MA0039.2 JASPAR - 1009341 1009350 1.0E-05 AGGGTGGGGC 10 Klf4_MA0039.2 JASPAR + 1009731 1009740 3.0E-06 AGGGTGTGGC 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 1004775 1004790 1.0E-06 CGTCGCCATGGTGACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 1004775 1004790 1.0E-06 GGTCACCATGGCGACG 16 ESR1_MA0112.2 JASPAR + 1009192 1009211 0.0E+00 GACACAGGTCACTGTGACCA 20 SP1_MA0079.2 JASPAR + 1004796 1004805 3.0E-06 CCCCTCCCCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 1009188 1009201 8.0E-06 GGATGACACAGGTC 14 SP4_C2H2_full_monomeric_17_1 SELEX - 1004737 1004753 6.0E-06 AGGGCCACGCCCCCACC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 1004740 1004750 5.0E-06 GCCACGCCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 1005572 1005582 7.0E-06 GCCACACCCAC 11 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 1009196 1009212 9.0E-06 CAGGTCACTGTGACCAC 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 1009196 1009212 2.0E-06 GTGGTCACAGTGACCTG 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 1004775 1004790 1.0E-06 CGTCGCCATGGTGACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 1004775 1004790 1.0E-06 GGTCACCATGGCGACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 1004775 1004790 5.0E-06 CGTCGCCATGGTGACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 1004775 1004790 2.0E-06 GGTCACCATGGCGACG 16 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 1004737 1004751 7.0E-06 GGCCACGCCCCCACC 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 1005569 1005583 6.0E-06 GGCCACACCCACCCT 15 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 1009191 1009202 6.0E-06 TGACCTGTGTCA 12 TBX21_TBX_full_dimeric_19_1 SELEX - 1009218 1009236 7.0E-06 TCACAGTGACGGCGTGTGA 19 EGR2_C2H2_DBD_monomeric_11_1 SELEX - 1005431 1005441 6.0E-06 ATGCCCACGCA 11 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 1009191 1009202 7.0E-06 TGACCTGTGTCA 12 V_ER_Q6_02_M00959 TRANSFAC + 1009196 1009206 5.0E-06 CAGGTCACTGT 11 V_KLF15_Q2_M01714 TRANSFAC - 1005486 1005499 7.0E-06 GATGTGGGGAGTGC 14 V_ESR1_01_M02261 TRANSFAC + 1009192 1009211 0.0E+00 GACACAGGTCACTGTGACCA 20 V_SP1_Q6_01_M00931 TRANSFAC - 1009141 1009150 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC - 1009705 1009726 3.0E-06 CCATAGGGTATAAATAGACCTG 22 V_SP1_03_M02281 TRANSFAC + 1004796 1004805 3.0E-06 CCCCTCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 1005571 1005582 1.0E-06 GCCACACCCACC 12 V_GKLF_02_M01588 TRANSFAC - 1009729 1009740 4.0E-06 GCCACACCCTTG 12 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 1009342 1009357 2.0E-06 CAGGCTCAGGGTGGGG 16 V_MEF2A_Q6_M02024 TRANSFAC + 1009711 1009720 8.0E-06 TATTTATACC 10 V_PAX_Q6_M00808 TRANSFAC - 1009166 1009176 2.0E-06 CTGGGACTCAC 11 V_SRF_C_M00215 TRANSFAC + 1006011 1006025 6.0E-06 GCCTAGTATGGCCAC 15 V_MYCMAX_02_M00123 TRANSFAC + 1005194 1005205 6.0E-06 GACCACGTGTGA 12 V_TATA_01_M00252 TRANSFAC - 1009705 1009719 2.0E-06 GTATAAATAGACCTG 15 V_DOBOX4_01_M01359 TRANSFAC + 1009709 1009725 7.0E-06 TCTATTTATACCCTATG 17 V_RSRFC4_Q2_M00407 TRANSFAC - 1009706 1009722 0.0E+00 AGGGTATAAATAGACCT 17 V_SP1_Q6_M00196 TRANSFAC - 1004794 1004806 4.0E-06 GGGGGGAGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 1005622 1005635 6.0E-06 CAGGGTGGGGAGGG 14 V_MEF2_04_M00233 TRANSFAC - 1009705 1009726 3.0E-06 CCATAGGGTATAAATAGACCTG 22 V_ERBETA_Q5_M01875 TRANSFAC - 1009195 1009209 6.0E-06 GTCACAGTGACCTGT 15 V_ERALPHA_01_M01801 TRANSFAC + 1009197 1009211 0.0E+00 AGGTCACTGTGACCA 15 V_ERALPHA_01_M01801 TRANSFAC - 1009197 1009211 0.0E+00 TGGTCACAGTGACCT 15 V_ZFP691_04_M02937 TRANSFAC + 1009123 1009139 7.0E-06 GAAGTGACTCCTGGCAC 17 V_SP4_Q5_M01273 TRANSFAC + 1004795 1004805 5.0E-06 GCCCCTCCCCC 11 V_TBP_01_M00471 TRANSFAC - 1009711 1009718 4.0E-06 TATAAATA 8 V_SMAD4_04_M02898 TRANSFAC - 1009178 1009194 1.0E-05 GTCATCCCGCCAGCCTG 17 V_PDEF_01_M02040 TRANSFAC - 1004702 1004711 1.0E-05 CCCGGATGTG 10 V_ZFP206_01_M01742 TRANSFAC + 1004721 1004731 8.0E-06 TGCGCCTGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 1004722 1004732 4.0E-06 CGCGCAGGCGC 11 V_RSRFC4_01_M00026 TRANSFAC + 1009707 1009722 1.0E-06 GGTCTATTTATACCCT 16 V_ZFP281_01_M01597 TRANSFAC - 1004796 1004806 2.0E-06 GGGGGGAGGGG 11 V_EKLF_Q5_M01874 TRANSFAC - 1005572 1005581 9.0E-06 CCACACCCAC 10 V_EKLF_Q5_M01874 TRANSFAC + 1005626 1005635 9.0E-06 CCCCACCCTG 10 V_EKLF_Q5_M01874 TRANSFAC + 1009342 1009351 9.0E-06 CCCCACCCTG 10 V_EKLF_Q5_M01874 TRANSFAC - 1009686 1009695 5.0E-06 CCACACCCAG 10 V_MEF2A_05_M01301 TRANSFAC - 1009710 1009721 1.0E-05 GGGTATAAATAG 12 V_SP1_Q4_01_M00932 TRANSFAC - 1004794 1004806 5.0E-06 GGGGGGAGGGGCC 13 V_COUP_DR1_Q6_M00765 TRANSFAC - 1009190 1009202 7.0E-06 TGACCTGTGTCAT 13 V_ESR2_01_M02377 TRANSFAC + 1009195 1009212 2.0E-06 ACAGGTCACTGTGACCAC 18 V_ER_Q6_M00191 TRANSFAC + 1005463 1005481 9.0E-06 TGATGTTGCTGTGACCCGT 19 V_ER_Q6_M00191 TRANSFAC + 1009195 1009213 1.0E-06 ACAGGTCACTGTGACCACC 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.