Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

BTBD17 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 388419 BTB (POZ) domain containing 17 chr17 - 72357458 - 72362958 72357958 Transcription Factor Binding Sites   Download all TFBS in the BTBD17 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 72357784 72357802 1.0E-06 CGGCCAGGAGGGGGCGGTG 19 TBP_MA0108.2 JASPAR - 72358023 72358037 8.0E-06 CTATATAAGGAAGAG 15 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 72358142 72358150 2.0E-06 ACCACTTAA 9 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 72358129 72358144 9.0E-06 GGTTGCCTGGGCAACA 16 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 72358142 72358150 2.0E-06 ACCACTTAA 9 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 72358164 72358176 9.0E-06 AGCCCCGGGGGCT 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 72358164 72358176 8.0E-06 AGCCCCCGGGGCT 13 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 72358142 72358151 2.0E-06 ACCACTTAAG 10 RFX5_RFX_DBD_dimeric_16_3 SELEX + 72358129 72358144 3.0E-06 TGTTGCCCAGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 72358129 72358144 5.0E-06 GGTTGCCTGGGCAACA 16 Hltf_MA0109.1 JASPAR + 72358026 72358035 6.0E-06 TTCCTTATAT 10 Zfx_MA0146.1 JASPAR - 72358363 72358376 3.0E-06 AGGGCCGAGGCCTG 14 V_RUSH1A_02_M01107 TRANSFAC + 72358026 72358035 6.0E-06 TTCCTTATAT 10 V_ZSCAN4_03_M02838 TRANSFAC + 72357443 72357459 7.0E-06 CACATGTGCACGCACAG 17 V_ATF5_01_M01295 TRANSFAC + 72358022 72358032 0.0E+00 CCTCTTCCTTA 11 V_ZFX_01_M01593 TRANSFAC + 72358360 72358375 0.0E+00 CCCCAGGCCTCGGCCC 16 V_ACAAT_B_M00309 TRANSFAC + 72358106 72358114 8.0E-06 GATTGGTGG 9 V_HEN1_01_M00068 TRANSFAC + 72358117 72358138 1.0E-06 ACTGGCCCCAGCTGTTGCCCAG 22 V_HEN1_01_M00068 TRANSFAC - 72358117 72358138 2.0E-06 CTGGGCAACAGCTGGGGCCAGT 22 V_AP4_Q6_02_M01860 TRANSFAC - 72353423 72353435 4.0E-06 CCAGCTGCAGGCG 13 V_AP4_Q6_02_M01860 TRANSFAC - 72358119 72358131 7.0E-06 ACAGCTGGGGCCA 13 V_AP4_Q6_02_M01860 TRANSFAC + 72358124 72358136 7.0E-06 CCAGCTGTTGCCC 13 V_BCL6_02_M01185 TRANSFAC - 72358265 72358278 1.0E-05 AACTTTCCAGGGAG 14 V_CP2_02_M00947 TRANSFAC - 72359570 72359584 0.0E+00 GCTGGGTTGAGCCAG 15 V_TAL1_Q6_M00993 TRANSFAC - 72357774 72357783 3.0E-06 TCCAGCTGCT 10 V_TATA_01_M00252 TRANSFAC - 72358023 72358037 8.0E-06 CTATATAAGGAAGAG 15 V_E12_Q6_M00693 TRANSFAC - 72359412 72359422 6.0E-06 GGCAGGTGCCA 11 V_SP4_03_M02810 TRANSFAC + 72357782 72357798 2.0E-06 GACACCGCCCCCTCCTG 17 V_ZBP89_Q4_M01816 TRANSFAC + 72358080 72358089 4.0E-06 CCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC + 72358221 72358230 2.0E-06 TCCTCCCCCA 10 V_SP1SP3_Q4_M01219 TRANSFAC + 72357786 72357796 1.0E-06 CCGCCCCCTCC 11 V_SRF_Q5_02_M01007 TRANSFAC + 72358023 72358041 2.0E-06 CTCTTCCTTATATAGGATC 19 V_SP1_01_M00008 TRANSFAC - 72357840 72357849 7.0E-06 GGGGCAGGGT 10 V_CTCF_02_M01259 TRANSFAC - 72357786 72357805 5.0E-06 GGCCGGCCAGGAGGGGGCGG 20 V_CTCF_01_M01200 TRANSFAC - 72357784 72357803 0.0E+00 CCGGCCAGGAGGGGGCGGTG 20 V_TFIII_Q6_M00706 TRANSFAC + 72357398 72357406 6.0E-06 AGAGGGAGG 9 V_ATF1_Q6_M00691 TRANSFAC - 72353314 72353324 8.0E-06 CTTCGACGTCA 11 V_MYOD_Q6_01_M00929 TRANSFAC - 72359409 72359426 3.0E-06 ACGAGGCAGGTGCCAGAC 18 V_HEN1_02_M00058 TRANSFAC + 72358117 72358138 1.0E-06 ACTGGCCCCAGCTGTTGCCCAG 22 V_HEN1_02_M00058 TRANSFAC - 72358117 72358138 7.0E-06 CTGGGCAACAGCTGGGGCCAGT 22 V_TFIIA_Q6_M00707 TRANSFAC - 72358025 72358036 1.0E-06 TATATAAGGAAG 12 V_NKX22_01_M00485 TRANSFAC - 72358141 72358150 1.0E-06 TTAAGTGGTT 10 V_FPM315_01_M01587 TRANSFAC - 72358218 72358229 1.0E-06 GGGGGAGGAGGG 12 V_ZFP281_01_M01597 TRANSFAC - 72358079 72358089 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_01_M01597 TRANSFAC - 72358220 72358230 9.0E-06 TGGGGGAGGAG 11 V_SRF_02_M01257 TRANSFAC - 72358022 72358039 2.0E-06 TCCTATATAAGGAAGAGG 18 V_CP2_01_M00072 TRANSFAC + 72359573 72359583 1.0E-06 GCTCAACCCAG 11 V_RFX1_02_M00281 TRANSFAC + 72358128 72358145 2.0E-06 CTGTTGCCCAGGCAACCA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.