Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

APP Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 351 amyloid beta (A4) precursor protein chr21 - 27542638 - 27548446 27543138 Transcription Factor Binding Sites   Download all TFBS in the APP promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 27539306 27539323 7.0E-06 TAAACAAATATTGTATAT 18 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 27539523 27539531 5.0E-06 ATAATAAAA 9 HSF2_HSF_DBD_trimeric_13_1 SELEX - 27541493 27541505 8.0E-06 CTCTCGAACATTC 13 HSF2_HSF_DBD_trimeric_13_1 SELEX + 27546033 27546045 2.0E-06 TACTAGAATGTTC 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 27541457 27541469 1.0E-06 GTAAAGAAAAACA 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 27539522 27539531 6.0E-06 ATAATAAAAC 10 CUX1_CUT_DBD_monomeric_10_1 SELEX - 27540202 27540211 8.0E-06 TAATCGATGA 10 Foxa2_MA0047.2 JASPAR - 27539300 27539311 8.0E-06 TGTTTACATTCC 12 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 27539109 27539122 1.0E-06 GAGGTCAAAGGTAA 14 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 27539116 27539129 6.0E-06 GAGTTGAGAGGTCA 14 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 27539993 27540010 1.0E-06 AAAATTAAAAAGAAATAA 18 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 27543367 27543385 9.0E-06 AAAGGTGAGTCCTAGGACG 19 SPIC_ETS_full_monomeric_14_1 SELEX - 27540867 27540880 0.0E+00 AAAAAGAGGAAGCA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 27539993 27540009 3.0E-06 AAATTAAAAAGAAATAA 17 FOXA1_MA0148.1 JASPAR - 27539301 27539311 4.0E-06 TGTTTACATTC 11 HSF1_HSF_full_trimeric_13_1 SELEX - 27541493 27541505 3.0E-06 CTCTCGAACATTC 13 HSF1_HSF_full_trimeric_13_1 SELEX + 27546033 27546045 1.0E-06 TACTAGAATGTTC 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 27543670 27543681 7.0E-06 TCTAAAGATAGA 12 En1_MA0027.1 JASPAR - 27541301 27541311 8.0E-06 TAGTAATTTTC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 27539302 27539313 0.0E+00 AATGTAAACAAA 12 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 27539112 27539124 3.0E-06 GAGAGGTCAAAGG 13 RFX4_RFX_DBD_dimeric_16_1 SELEX - 27540187 27540202 9.0E-06 AGAAACCATGATAACT 16 FOXL1_forkhead_full_dimeric_13_1 SELEX + 27539304 27539316 0.0E+00 TGTAAACAAATAT 13 FOXO3_MA0157.1 JASPAR + 27539304 27539311 7.0E-06 TGTAAACA 8 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 27539109 27539122 1.0E-06 GAGGTCAAAGGTAA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 27539109 27539122 2.0E-06 GAGGTCAAAGGTAA 14 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 27539302 27539312 1.0E-06 AATGTAAACAA 11 TBP_MA0108.2 JASPAR - 27540870 27540884 1.0E-06 GTATAAAAAGAGGAA 15 EWSR1-FLI1_MA0149.1 JASPAR - 27544227 27544244 5.0E-06 GGAGAGAAGGCAGGCTGC 18 STAT1_MA0137.2 JASPAR - 27541256 27541270 6.0E-06 GTTTTCCTGTAATTC 15 SOX9_HMG_DBD_monomeric_9_1 SELEX - 27539418 27539426 9.0E-06 GAACAATGG 9 FOXO1_forkhead_DBD_monomeric_8_1 SELEX + 27539305 27539312 7.0E-06 GTAAACAA 8 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 27543602 27543616 2.0E-06 TTGTTGAGACAGCAA 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 27543602 27543616 1.0E-06 TTGCTGTCTCAACAA 15 IRF7_IRF_DBD_trimeric_17_1 SELEX + 27540842 27540858 3.0E-06 AAAACTAAATTCGAATC 17 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 27539398 27539406 8.0E-06 AGATAATCC 9 SPIB_ETS_DBD_monomeric_14_1 SELEX + 27539437 27539450 2.0E-06 AAATACAGGAAGTT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 27540867 27540880 0.0E+00 AAAAAGAGGAAGCA 14 TCF7L1_HMG_full_monomeric_12_1 SELEX - 27539112 27539123 2.0E-06 AGAGGTCAAAGG 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 27545811 27545826 8.0E-06 GAAATGGCATTAAATG 16 TEAD1_TEA_full_monomeric_10_1 SELEX - 27539298 27539307 8.0E-06 TACATTCCTC 10 TEAD1_TEA_full_monomeric_10_1 SELEX + 27539509 27539518 6.0E-06 TACATTCCAC 10 LEF1_HMG_DBD_monomeric_15_1 SELEX - 27539109 27539123 7.0E-06 AGAGGTCAAAGGTAA 15 IRF1_MA0050.1 JASPAR - 27542498 27542509 7.0E-06 AAAACCGAAAAC 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 27539523 27539532 1.0E-06 GATAATAAAA 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 27541353 27541366 6.0E-06 TCTTAACATTTGCA 14 Sox17_HMG_DBD_dimeric_15_2 SELEX + 27541460 27541474 4.0E-06 AAGAAAAACAGTCAT 15 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 27539523 27539531 3.0E-06 ATAATAAAA 9 CUX2_CUT_DBD_monomeric_10_1 SELEX - 27540202 27540211 7.0E-06 TAATCGATGA 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 27539305 27539315 0.0E+00 GTAAACAAATA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 27545593 27545606 1.0E-05 ATAATCTATAAAAA 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 27545776 27545789 2.0E-06 AAAGCAAAAAGCCA 14 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX - 27540002 27540011 9.0E-06 AAAAATTAAA 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 27545602 27545611 9.0E-06 AAAAATTAAA 10 HSF4_HSF_DBD_trimeric_13_1 SELEX - 27541493 27541505 4.0E-06 CTCTCGAACATTC 13 HSF4_HSF_DBD_trimeric_13_1 SELEX + 27546033 27546045 1.0E-06 TACTAGAATGTTC 13 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 27541162 27541173 3.0E-06 TTTACCCACAAG 12 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 27539522 27539532 1.0E-05 GATAATAAAAC 11 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 27539108 27539122 1.0E-06 GAGGTCAAAGGTAAG 15 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 27539115 27539129 6.0E-06 GAGTTGAGAGGTCAA 15 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 27539369 27539382 1.0E-06 CTGGAAATTTACTA 14 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 27540079 27540092 2.0E-06 ATGGAATAATACTG 14 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 27541298 27541311 1.0E-06 TTGGAAAATTACTA 14 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 27543601 27543617 1.0E-05 TTTGCTGTCTCAACAAG 17 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 27545710 27545722 3.0E-06 TTCTGACGCAATC 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 27545710 27545723 2.0E-06 ATTCTGACGCAATC 14 NFATC1_NFAT_full_dimeric_20_1 SELEX + 27543579 27543598 8.0E-06 AAAGGAAATAGGATTTTCTT 20 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 27541255 27541271 6.0E-06 TGTTTTCCTGTAATTCC 17 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX - 27541196 27541205 1.0E-05 GCAAGGTCAT 10 SOX14_HMG_DBD_dimeric_15_1 SELEX + 27541460 27541474 4.0E-06 AAGAAAAACAGTCAT 15 NFATC1_NFAT_full_dimeric_15_1 SELEX + 27545635 27545649 0.0E+00 TTTCCACTGTTGAAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 27545635 27545649 0.0E+00 TTTCAACAGTGGAAA 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 27539109 27539122 1.0E-06 GAGGTCAAAGGTAA 14 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 27539116 27539129 4.0E-06 GAGTTGAGAGGTCA 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 27539305 27539315 1.0E-06 GTAAACAAATA 11 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 27540032 27540047 4.0E-06 AAGTTCACGAGGTTAA 16 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 27539522 27539531 8.0E-06 ATAATAAAAC 10 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 27539993 27540010 1.0E-06 AAAATTAAAAAGAAATAA 18 Foxd3_MA0041.1 JASPAR - 27539307 27539318 4.0E-06 CAATATTTGTTT 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 27539510 27539517 1.0E-05 ACATTCCA 8 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 27541196 27541206 4.0E-06 TGCAAGGTCAT 11 FEV_MA0156.1 JASPAR + 27539384 27539391 1.0E-05 CAGGAAAT 8 FEV_MA0156.1 JASPAR - 27545822 27545829 1.0E-05 CAGGAAAT 8 Hltf_MA0109.1 JASPAR + 27541637 27541646 1.0E-05 ATCCTTTTAT 10 MAFG_bZIP_full_dimeric_21_1 SELEX - 27543599 27543619 9.0E-06 GTTTTGCTGTCTCAACAAGCA 21 Pou5f1_MA0142.1 JASPAR + 27541291 27541305 7.0E-06 TTTTCTTTTGGAAAA 15 HNF4A_MA0114.1 JASPAR - 27539109 27539121 3.0E-06 AGGTCAAAGGTAA 13 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 27541195 27541205 6.0E-06 GCAAGGTCATT 11 SOX18_HMG_full_dimeric_15_3 SELEX + 27541460 27541474 4.0E-06 AAGAAAAACAGTCAT 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 27541163 27541173 7.0E-06 TTTACCCACAA 11 ELF3_ETS_DBD_monomeric_12_1 SELEX + 27539381 27539392 8.0E-06 TACCAGGAAATG 12 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 27539109 27539122 1.0E-06 GAGGTCAAAGGTAA 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 27539509 27539518 8.0E-06 TACATTCCAC 10 SOX9_MA0077.1 JASPAR - 27539418 27539426 5.0E-06 GAACAATGG 9 SPI1_ETS_full_monomeric_14_1 SELEX + 27539437 27539450 1.0E-06 AAATACAGGAAGTT 14 SPI1_ETS_full_monomeric_14_1 SELEX - 27540867 27540880 0.0E+00 AAAAAGAGGAAGCA 14 FOXB1_forkhead_full_monomeric_9_1 SELEX + 27539304 27539312 2.0E-06 TGTAAACAA 9 IRF3_IRF_full_trimeric_21_1 SELEX + 27542443 27542463 1.0E-06 AGAGAAAGGAAAGGGCAACGA 21 IRF3_IRF_full_trimeric_21_1 SELEX - 27546246 27546266 5.0E-06 TGTGGAAGGAACCAGAAACCA 21 FOXO3_forkhead_full_monomeric_8_1 SELEX + 27539305 27539312 7.0E-06 GTAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 27545600 27545611 8.0E-06 ATAAAAATTAAA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 27539993 27540010 1.0E-06 AAAATTAAAAAGAAATAA 18 ELF5_MA0136.1 JASPAR - 27543580 27543588 2.0E-06 TATTTCCTT 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 27539522 27539532 7.0E-06 GATAATAAAAC 11 Sox2_MA0143.1 JASPAR + 27541290 27541304 9.0E-06 TTTTTCTTTTGGAAA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 27539303 27539315 0.0E+00 ATGTAAACAAATA 13 DPRX_homeodomain_DBD_monomeric_11_1 SELEX - 27539397 27539407 6.0E-06 TAGATAATCCT 11 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 27539109 27539122 0.0E+00 GAGGTCAAAGGTAA 14 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 27539116 27539129 6.0E-06 GAGTTGAGAGGTCA 14 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 27539523 27539531 3.0E-06 ATAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 27541457 27541469 1.0E-06 GTAAAGAAAAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 27539302 27539312 2.0E-06 AATGTAAACAA 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 27539523 27539531 3.0E-06 ATAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 27539522 27539532 5.0E-06 GATAATAAAAC 11 TEAD1_MA0090.1 JASPAR - 27539296 27539307 2.0E-06 TACATTCCTCTC 12 TEAD1_MA0090.1 JASPAR + 27539509 27539520 2.0E-06 TACATTCCACTT 12 V_ELF5_02_M01980 TRANSFAC + 27541276 27541285 3.0E-06 CCCGGAAATT 10 V_RUSH1A_02_M01107 TRANSFAC + 27541637 27541646 1.0E-05 ATCCTTTTAT 10 V_NFAT_Q4_01_M00935 TRANSFAC + 27541298 27541307 1.0E-06 TTGGAAAATT 10 V_HOXA9_01_M01351 TRANSFAC + 27545594 27545610 6.0E-06 TAATCTATAAAAATTAA 17 V_FOXP1_01_M00987 TRANSFAC + 27539993 27540012 4.0E-06 TTATTTCTTTTTAATTTTTT 20 V_HSF2_01_M00147 TRANSFAC + 27546037 27546046 2.0E-06 AGAATGTTCT 10 V_HSF2_01_M00147 TRANSFAC - 27546037 27546046 1.0E-05 AGAACATTCT 10 RXR_RAR_DR5_MA0159.1 JASPAR + 27543358 27543374 3.0E-06 GGATCAGGGAAAGGTGA 17 V_HNF3B_01_M00131 TRANSFAC - 27539306 27539320 0.0E+00 TACAATATTTGTTTA 15 V_SPI1_01_M01203 TRANSFAC + 27539437 27539453 8.0E-06 AAATACAGGAAGTTTTC 17 V_SPI1_01_M01203 TRANSFAC - 27540864 27540880 1.0E-06 AAAAAGAGGAAGCATGT 17 V_DBX1_01_M01483 TRANSFAC - 27539997 27540013 0.0E+00 AAAAAAATTAAAAAGAA 17 V_DBX1_01_M01483 TRANSFAC + 27545594 27545610 5.0E-06 TAATCTATAAAAATTAA 17 V_ZFP187_03_M02830 TRANSFAC - 27539502 27539515 3.0E-06 GAATGTACTAAAAT 14 V_GEN_INI_B_M00315 TRANSFAC + 27540026 27540033 1.0E-05 CCTCATTT 8 V_GEN_INI_B_M00315 TRANSFAC + 27543619 27543626 1.0E-05 CCTCATTT 8 V_CDX2_Q5_01_M01659 TRANSFAC + 27545597 27545607 1.0E-05 TCTATAAAAAT 11 V_APOLYA_B_M00310 TRANSFAC - 27543584 27543598 9.0E-06 AAGAAAATCCTATTT 15 V_APOLYA_B_M00310 TRANSFAC + 27545812 27545826 5.0E-06 ATTTAATGCCATTTC 15 V_FXR_Q3_M00631 TRANSFAC + 27541188 27541201 7.0E-06 AAAGTTCAATGACC 14 V_FXR_Q3_M00631 TRANSFAC - 27541191 27541204 0.0E+00 CAAGGTCATTGAAC 14 V_HSF1_Q6_M01023 TRANSFAC - 27541490 27541506 6.0E-06 ACTCTCGAACATTCAGC 17 V_FOXO3_02_M02270 TRANSFAC + 27539304 27539311 7.0E-06 TGTAAACA 8 V_AREB6_03_M00414 TRANSFAC - 27543232 27543243 1.0E-05 GTGCACCTGTGG 12 V_SMAD3_Q6_01_M01888 TRANSFAC - 27539265 27539277 1.0E-06 AGACAGACACACA 13 V_SMAD3_Q6_01_M01888 TRANSFAC - 27539269 27539281 1.0E-06 AGACAGACAGACA 13 V_SMAD3_Q6_01_M01888 TRANSFAC - 27539273 27539285 1.0E-06 AGACAGACAGACA 13 V_FOXA2_04_M02749 TRANSFAC + 27539300 27539316 0.0E+00 GGAATGTAAACAAATAT 17 V_SOX30_03_M02804 TRANSFAC - 27539414 27539429 1.0E-06 AAGGAACAATGGGATG 16 V_HMGIY_Q3_M01010 TRANSFAC + 27540000 27540014 3.0E-06 TTTTTAATTTTTTTG 15 V_HMGIY_Q3_M01010 TRANSFAC + 27540001 27540015 2.0E-06 TTTTAATTTTTTTGA 15 V_HMGIY_Q3_M01010 TRANSFAC - 27545599 27545613 3.0E-06 ACTTTAATTTTTATA 15 V_FOXD3_01_M00130 TRANSFAC - 27539307 27539318 2.0E-06 CAATATTTGTTT 12 V_BCL6_01_M01183 TRANSFAC + 27539996 27540011 1.0E-06 TTTCTTTTTAATTTTT 16 V_BCL6_01_M01183 TRANSFAC + 27539997 27540012 3.0E-06 TTCTTTTTAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 27539998 27540013 8.0E-06 TCTTTTTAATTTTTTT 16 V_CREB_Q4_M00178 TRANSFAC - 27545710 27545721 9.0E-06 TCTGACGCAATC 12 V_ETS_B_M00340 TRANSFAC - 27540864 27540877 4.0E-06 AAGAGGAAGCATGT 14 V_FOXO4_02_M00476 TRANSFAC - 27539302 27539315 0.0E+00 TATTTGTTTACATT 14 V_NERF_01_M01976 TRANSFAC + 27541276 27541285 7.0E-06 CCCGGAAATT 10 V_POU5F1_02_M02245 TRANSFAC + 27541291 27541305 7.0E-06 TTTTCTTTTGGAAAA 15 V_HOXA13_02_M01297 TRANSFAC - 27539541 27539549 1.0E-06 AAATAAAAC 9 V_SPDEF_04_M02915 TRANSFAC - 27543583 27543598 3.0E-06 AAGAAAATCCTATTTC 16 V_SPDEF_04_M02915 TRANSFAC - 27546032 27546047 3.0E-06 AAGAACATTCTAGTAA 16 V_FOXJ2_02_M00423 TRANSFAC - 27541354 27541367 3.0E-06 ATCTTAACATTTGC 14 V_ELF1_01_M01975 TRANSFAC + 27541276 27541285 4.0E-06 CCCGGAAATT 10 V_IRF_Q6_01_M00972 TRANSFAC - 27540057 27540067 1.0E-05 GGAAATGAAAA 11 V_IRF_Q6_01_M00972 TRANSFAC - 27545628 27545638 3.0E-06 GAAAGAGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 27540054 27540069 5.0E-06 GAGGAAATGAAAAGGA 16 V_IRF2_Q6_M01882 TRANSFAC - 27545625 27545640 1.0E-06 TGGAAAGAGAAACTGC 16 V_NFAT3_Q3_M01734 TRANSFAC - 27541299 27541308 7.0E-06 TAATTTTCCA 10 V_RP58_01_M00532 TRANSFAC + 27541266 27541277 1.0E-05 AAAACATCTGCC 12 V_GCNF_Q3_M02009 TRANSFAC - 27541195 27541204 9.0E-06 CAAGGTCATT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 27539304 27539315 0.0E+00 TGTAAACAAATA 12 V_ATF3_Q6_01_M01863 TRANSFAC + 27545711 27545721 6.0E-06 ATTGCGTCAGA 11 V_EAR2_Q2_M01728 TRANSFAC + 27539109 27539122 1.0E-06 TTACCTTTGACCTC 14 V_IRF3_05_M02767 TRANSFAC - 27542497 27542510 8.0E-06 GAAAACCGAAAACG 14 V_HNF3_Q6_01_M01012 TRANSFAC - 27539299 27539316 8.0E-06 ATATTTGTTTACATTCCT 18 V_HNF3_Q6_01_M01012 TRANSFAC - 27539303 27539320 6.0E-06 TACAATATTTGTTTACAT 18 V_MAF_Q6_M00648 TRANSFAC + 27539439 27539454 9.0E-06 ATACAGGAAGTTTTCT 16 V_FOXJ1_03_M02750 TRANSFAC + 27539302 27539317 0.0E+00 AATGTAAACAAATATT 16 V_FOXJ1_03_M02750 TRANSFAC - 27539539 27539554 9.0E-06 AGGGTAAATAAAACAT 16 V_HNF4A_03_M02220 TRANSFAC - 27539109 27539121 3.0E-06 AGGTCAAAGGTAA 13 V_HFH4_01_M00742 TRANSFAC - 27539306 27539318 1.0E-06 CAATATTTGTTTA 13 V_OCT_C_M00210 TRANSFAC + 27539524 27539536 8.0E-06 TTTATTATCATGT 13 V_PITX2_Q6_M02114 TRANSFAC - 27541254 27541263 9.0E-06 TGTAATTCCA 10 V_PU1_Q4_M01172 TRANSFAC + 27540861 27540879 1.0E-06 CCTACATGCTTCCTCTTTT 19 V_HOXD13_01_M01404 TRANSFAC - 27545549 27545564 9.0E-06 TGCTCAATAAAAGTTC 16 V_HOXD13_01_M01404 TRANSFAC + 27545594 27545609 1.0E-06 TAATCTATAAAAATTA 16 V_SOX21_03_M02803 TRANSFAC - 27545596 27545611 4.0E-06 TTTAATTTTTATAGAT 16 V_TCFAP2E_04_M02926 TRANSFAC + 27540882 27540895 4.0E-06 TACAGAAAGAAATA 14 V_TCFAP2E_04_M02926 TRANSFAC - 27541287 27541300 5.0E-06 CAAAAGAAAAAAAG 14 V_MEF2A_Q6_M02024 TRANSFAC - 27539432 27539441 4.0E-06 TATTTAAAAA 10 V_CETS1P54_02_M00074 TRANSFAC + 27539439 27539451 1.0E-06 ATACAGGAAGTTT 13 V_TAL1_GATA1_01_M02243 TRANSFAC - 27541642 27541659 4.0E-06 TTTTAGGGTGCAGATAAA 18 V_ELF2_02_M02054 TRANSFAC + 27541276 27541285 4.0E-06 CCCGGAAATT 10 V_ELF4_04_M02850 TRANSFAC - 27540001 27540017 1.0E-06 ATTCAAAAAAATTAAAA 17 V_ELF4_04_M02850 TRANSFAC - 27540002 27540018 7.0E-06 GATTCAAAAAAATTAAA 17 V_ZNF219_01_M01122 TRANSFAC - 27542333 27542344 7.0E-06 CACCCCCATCCC 12 V_SOX7_03_M02807 TRANSFAC - 27539411 27539432 2.0E-06 AGTAAGGAACAATGGGATGAGA 22 V_GEN_INI3_B_M00314 TRANSFAC + 27540026 27540033 1.0E-05 CCTCATTT 8 V_GEN_INI3_B_M00314 TRANSFAC + 27543619 27543626 1.0E-05 CCTCATTT 8 V_HELIOSA_02_M01004 TRANSFAC + 27541296 27541306 4.0E-06 TTTTGGAAAAT 11 V_FREAC3_01_M00291 TRANSFAC + 27539300 27539315 1.0E-06 GGAATGTAAACAAATA 16 V_ZFP105_03_M02827 TRANSFAC - 27539997 27540011 0.0E+00 AAAAATTAAAAAGAA 15 V_HOXB13_01_M01467 TRANSFAC - 27545549 27545564 9.0E-06 TGCTCAATAAAAGTTC 16 V_HOXB13_01_M01467 TRANSFAC + 27545594 27545609 3.0E-06 TAATCTATAAAAATTA 16 V_FOXO1_02_M00474 TRANSFAC - 27539302 27539315 0.0E+00 TATTTGTTTACATT 14 V_RXRA_03_M02791 TRANSFAC + 27539111 27539127 9.0E-06 ACCTTTGACCTCTCAAC 17 V_HNF4_01_B_M00411 TRANSFAC - 27539108 27539122 1.0E-06 GAGGTCAAAGGTAAG 15 V_NFAT_Q6_M00302 TRANSFAC + 27541296 27541307 4.0E-06 TTTTGGAAAATT 12 V_SOX7_04_M02911 TRANSFAC - 27541618 27541639 5.0E-06 GATCGAATTGAGTGAAGATTAA 22 V_TATA_01_M00252 TRANSFAC - 27540870 27540884 1.0E-06 GTATAAAAAGAGGAA 15 V_NKX61_01_M00424 TRANSFAC + 27540000 27540012 0.0E+00 TTTTTAATTTTTT 13 V_XFD3_01_M00269 TRANSFAC + 27539302 27539315 1.0E-06 AATGTAAACAAATA 14 V_IRF2_01_M00063 TRANSFAC - 27542498 27542510 4.0E-06 GAAAACCGAAAAC 13 V_HSF1_01_M00146 TRANSFAC + 27546037 27546046 1.0E-06 AGAATGTTCT 10 V_HSF1_01_M00146 TRANSFAC - 27546037 27546046 7.0E-06 AGAACATTCT 10 V_RSRFC4_Q2_M00407 TRANSFAC - 27543667 27543683 6.0E-06 GTTCTAAAGATAGAAAT 17 V_AMEF2_Q6_M00403 TRANSFAC - 27540003 27540020 8.0E-06 CTGATTCAAAAAAATTAA 18 V_IRF3_Q3_M01279 TRANSFAC + 27545777 27545789 7.0E-06 GGCTTTTTGCTTT 13 V_CDX2_01_M01449 TRANSFAC - 27539520 27539535 1.0E-05 CATGATAATAAAACAA 16 V_HNF3A_01_M01261 TRANSFAC + 27539303 27539312 1.0E-06 ATGTAAACAA 10 V_HNF3A_01_M01261 TRANSFAC + 27541428 27541437 9.0E-06 ATGCAAACAA 10 V_HNF3_Q6_M00791 TRANSFAC + 27539305 27539317 2.0E-06 GTAAACAAATATT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 27539305 27539315 1.0E-05 TATTTGTTTAC 11 V_IRF_Q6_M00772 TRANSFAC + 27540053 27540067 1.0E-06 TTCCTTTTCATTTCC 15 V_STAT5A_02_M00460 TRANSFAC + 27541259 27541282 8.0E-06 TTACAGGAAAACATCTGCCCGGAA 24 V_HNF1_Q6_01_M01011 TRANSFAC - 27539991 27540011 7.0E-06 AAAAATTAAAAAGAAATAACG 21 V_HNF1_Q6_01_M01011 TRANSFAC + 27541200 27541220 9.0E-06 CCTTGCAAATTAGAAACTAAA 21 V_NKX25_Q5_M01043 TRANSFAC - 27539184 27539193 3.0E-06 TCTCACTTGA 10 V_MEF2_03_M00232 TRANSFAC - 27543666 27543687 0.0E+00 GTTCGTTCTAAAGATAGAAATT 22 V_SOX18_03_M02801 TRANSFAC + 27540002 27540017 1.0E-05 TTTAATTTTTTTGAAT 16 V_TATA_C_M00216 TRANSFAC - 27540876 27540885 7.0E-06 TGTATAAAAA 10 V_TATA_C_M00216 TRANSFAC + 27545597 27545606 1.0E-06 TCTATAAAAA 10 V_EHF_02_M01974 TRANSFAC + 27541276 27541285 5.0E-06 CCCGGAAATT 10 V_ISRE_01_M00258 TRANSFAC - 27541204 27541218 2.0E-06 TAGTTTCTAATTTGC 15 V_ISRE_01_M00258 TRANSFAC + 27545626 27545640 0.0E+00 CAGTTTCTCTTTCCA 15 V_ELF5_01_M01197 TRANSFAC + 27543578 27543588 1.0E-06 TAAAGGAAATA 11 V_HOX13_01_M00023 TRANSFAC - 27541212 27541241 4.0E-06 AGACTATCACACCATTAGTTTTTTAGTTTC 30 V_CDX1_01_M01373 TRANSFAC - 27539520 27539535 6.0E-06 CATGATAATAAAACAA 16 V_OCT1_04_M00138 TRANSFAC - 27539313 27539335 3.0E-06 TTAAGTTTCTGCATATACAATAT 23 V_OCT1_04_M00138 TRANSFAC - 27539520 27539542 2.0E-06 ACATGCACATGATAATAAAACAA 23 V_OCT1_04_M00138 TRANSFAC - 27539993 27540015 2.0E-06 TCAAAAAAATTAAAAAGAAATAA 23 V_OCT1_04_M00138 TRANSFAC - 27540003 27540025 9.0E-06 AATGGCTGATTCAAAAAAATTAA 23 V_OCT1_04_M00138 TRANSFAC + 27545598 27545620 7.0E-06 CTATAAAAATTAAAGTTCTTAGA 23 Tal1_Gata1_MA0140.1 JASPAR - 27541642 27541659 4.0E-06 TTTTAGGGTGCAGATAAA 18 V_MEF2_04_M00233 TRANSFAC - 27543666 27543687 6.0E-06 GTTCGTTCTAAAGATAGAAATT 22 V_SPIB_01_M01204 TRANSFAC + 27539437 27539453 0.0E+00 AAATACAGGAAGTTTTC 17 V_SPIB_01_M01204 TRANSFAC - 27540864 27540880 0.0E+00 AAAAAGAGGAAGCATGT 17 V_DAX1_01_M01248 TRANSFAC - 27541191 27541210 3.0E-06 AATTTGCAAGGTCATTGAAC 20 V_TEF_01_M01305 TRANSFAC - 27539296 27539307 2.0E-06 TACATTCCTCTC 12 V_TEF_01_M01305 TRANSFAC + 27539509 27539520 2.0E-06 TACATTCCACTT 12 V_XFD2_01_M00268 TRANSFAC + 27539302 27539315 1.0E-06 AATGTAAACAAATA 14 V_PNR_01_M01650 TRANSFAC - 27539109 27539122 6.0E-06 GAGGTCAAAGGTAA 14 V_NCX_02_M01420 TRANSFAC - 27539997 27540013 1.0E-06 AAAAAAATTAAAAAGAA 17 V_HNF4A_Q6_01_M02016 TRANSFAC - 27539106 27539120 9.0E-06 GGTCAAAGGTAAGGG 15 V_HB24_01_M01399 TRANSFAC - 27539304 27539318 6.0E-06 CAATATTTGTTTACA 15 V_STAT4_Q5_M02117 TRANSFAC + 27541259 27541268 4.0E-06 TTACAGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC + 27543577 27543586 2.0E-06 TTAAAGGAAA 10 V_PPARA_02_M00518 TRANSFAC + 27542329 27542347 1.0E-05 AAGGGGGATGGGGGTGAGA 19 V_SP3_Q3_M00665 TRANSFAC + 27542138 27542151 0.0E+00 AGACTTGGGGAAGG 14 V_TBP_06_M02814 TRANSFAC - 27545595 27545610 5.0E-06 TTAATTTTTATAGATT 16 V_OCT4_02_M01124 TRANSFAC + 27541292 27541306 1.0E-05 TTTCTTTTGGAAAAT 15 V_NR1B1_Q6_M02110 TRANSFAC - 27539114 27539123 4.0E-06 AGAGGTCAAA 10 V_NR1B1_Q6_M02110 TRANSFAC + 27541188 27541197 5.0E-06 AAAGTTCAAT 10 V_SOX9_B1_M00410 TRANSFAC - 27539416 27539429 1.0E-06 AAGGAACAATGGGA 14 V_ELF4_01_M01979 TRANSFAC + 27541276 27541285 6.0E-06 CCCGGAAATT 10 V_ICSBP_Q6_M00699 TRANSFAC - 27545626 27545637 0.0E+00 AAAGAGAAACTG 12 V_ICSBP_Q6_M00699 TRANSFAC - 27546246 27546257 1.0E-05 AACCAGAAACCA 12 V_SOX17_04_M02904 TRANSFAC - 27541505 27541521 5.0E-06 TTCCCCATTCATCCAAC 17 V_ZFP691_04_M02937 TRANSFAC + 27540218 27540234 3.0E-06 ACCGTGACTCCTTACAG 17 V_FREAC2_01_M00290 TRANSFAC + 27539300 27539315 1.0E-06 GGAATGTAAACAAATA 16 V_FREAC2_01_M00290 TRANSFAC - 27539541 27539556 9.0E-06 GCAGGGTAAATAAAAC 16 V_ELF1_Q6_M00746 TRANSFAC + 27539438 27539449 2.0E-06 AATACAGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC - 27540868 27540879 5.0E-06 AAAAGAGGAAGC 12 V_ELF1_Q6_M00746 TRANSFAC + 27541258 27541269 3.0E-06 ATTACAGGAAAA 12 V_HFH8_01_M00294 TRANSFAC - 27539302 27539314 9.0E-06 ATTTGTTTACATT 13 V_LRH1_Q5_M01142 TRANSFAC + 27541196 27541207 1.0E-05 ATGACCTTGCAA 12 V_FXR_IR1_Q6_M00767 TRANSFAC - 27539354 27539366 3.0E-06 AGGTTTATATCCC 13 V_GATA1_05_M00346 TRANSFAC - 27541641 27541650 6.0E-06 GCAGATAAAA 10 V_MTF1_06_M02882 TRANSFAC - 27539996 27540009 3.0E-06 AAATTAAAAAGAAA 14 V_MTF1_06_M02882 TRANSFAC - 27539998 27540011 4.0E-06 AAAAATTAAAAAGA 14 V_HAND1E47_01_M00222 TRANSFAC - 27541816 27541831 4.0E-06 ATGTGCGTCTGGAAAG 16 V_POU6F1_02_M01462 TRANSFAC - 27543615 27543631 9.0E-06 TTAAAAAATGAGGTTTT 17 V_MYF6_04_M02885 TRANSFAC - 27539265 27539279 8.0E-06 ACAGACAGACACACA 15 V_TAL1_01_M01591 TRANSFAC + 27544232 27544244 2.0E-06 CTGCCTTCTCTCC 13 V_IPF1_05_M01255 TRANSFAC - 27540000 27540011 0.0E+00 AAAAATTAAAAA 12 V_AREB6_02_M00413 TRANSFAC - 27543365 27543376 1.0E-05 ACTCACCTTTCC 12 V_DR1_Q3_M00762 TRANSFAC - 27539109 27539121 2.0E-06 AGGTCAAAGGTAA 13 V_FOXL1_02_M02857 TRANSFAC - 27539516 27539531 1.0E-06 ATAATAAAACAAAGTG 16 V_OCT1_Q6_M00195 TRANSFAC + 27541198 27541212 1.0E-05 GACCTTGCAAATTAG 15 V_FOXL1_04_M02753 TRANSFAC + 27539300 27539316 0.0E+00 GGAATGTAAACAAATAT 17 V_FOXJ3_06_M02855 TRANSFAC - 27539516 27539532 7.0E-06 GATAATAAAACAAAGTG 17 NR1H2_RXRA_MA0115.1 JASPAR - 27539107 27539123 0.0E+00 AGAGGTCAAAGGTAAGG 17 V_ERR1_Q2_M00511 TRANSFAC - 27541195 27541208 7.0E-06 TTTGCAAGGTCATT 14 V_TEF1_Q6_03_M01817 TRANSFAC + 27539298 27539306 3.0E-06 GAGGAATGT 9 V_TEF1_Q6_03_M01817 TRANSFAC - 27539510 27539518 6.0E-06 GTGGAATGT 9 V_GEN_INI2_B_M00313 TRANSFAC + 27540026 27540033 1.0E-05 CCTCATTT 8 V_GEN_INI2_B_M00313 TRANSFAC + 27543619 27543626 1.0E-05 CCTCATTT 8 V_PXR_Q2_M00964 TRANSFAC - 27541192 27541203 6.0E-06 AAGGTCATTGAA 12 V_PXR_Q2_M00964 TRANSFAC - 27543624 27543635 6.0E-06 GGGGTTAAAAAA 12 V_ESRRA_04_M02852 TRANSFAC - 27539111 27539127 1.0E-06 GTTGAGAGGTCAAAGGT 17 V_FPM315_01_M01587 TRANSFAC - 27542418 27542429 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 27542421 27542432 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 27542424 27542435 6.0E-06 TGGGGAGGAGGA 12 V_FOXO3_01_M00477 TRANSFAC - 27539302 27539315 0.0E+00 TATTTGTTTACATT 14 V_TBX15_02_M01264 TRANSFAC + 27541356 27541373 6.0E-06 AAATGTTAAGATGCCAAA 18 V_P53_05_M01655 TRANSFAC + 27546282 27546301 4.0E-06 AAATGTGTTCTGGCTTGTCT 20 V_FOXA2_03_M02260 TRANSFAC - 27539300 27539311 8.0E-06 TGTTTACATTCC 12 V_FOX_Q2_M00809 TRANSFAC - 27539306 27539318 1.0E-06 CAATATTTGTTTA 13 V_RSRFC4_01_M00026 TRANSFAC + 27543668 27543683 9.0E-06 TTTCTATCTTTAGAAC 16 V_ESRRA_03_M02748 TRANSFAC - 27541192 27541208 2.0E-06 TTTGCAAGGTCATTGAA 17 V_BBX_03_M02739 TRANSFAC + 27541189 27541203 5.0E-06 AAGTTCAATGACCTT 15 V_BBX_03_M02739 TRANSFAC - 27541189 27541203 8.0E-06 AAGGTCATTGAACTT 15 V_RXR_RAR_01_M02272 TRANSFAC + 27543358 27543374 3.0E-06 GGATCAGGGAAAGGTGA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 27545626 27545639 1.0E-06 CAGTTTCTCTTTCC 14 V_SOX2_01_M02246 TRANSFAC + 27541290 27541304 9.0E-06 TTTTTCTTTTGGAAA 15 V_ZFP281_04_M02831 TRANSFAC - 27542328 27542342 9.0E-06 CCCCCATCCCCCTTC 15 V_SRF_06_M02916 TRANSFAC - 27540001 27540017 5.0E-06 ATTCAAAAAAATTAAAA 17 V_SRF_06_M02916 TRANSFAC - 27541284 27541300 7.0E-06 CAAAAGAAAAAAAGCAA 17 V_SRF_06_M02916 TRANSFAC - 27541285 27541301 1.0E-05 CCAAAAGAAAAAAAGCA 17 V_SRF_06_M02916 TRANSFAC + 27541457 27541473 8.0E-06 GTAAAGAAAAACAGTCA 17 V_HSF2_02_M01244 TRANSFAC + 27541493 27541505 7.0E-06 GAATGTTCGAGAG 13 V_HSF2_02_M01244 TRANSFAC - 27546033 27546045 2.0E-06 GAACATTCTAGTA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 27544227 27544244 5.0E-06 GGAGAGAAGGCAGGCTGC 18 V_FOXJ2_01_M00422 TRANSFAC + 27539303 27539320 0.0E+00 ATGTAAACAAATATTGTA 18 V_ZIC3_04_M02837 TRANSFAC + 27543454 27543468 7.0E-06 GCCTCCCGGGGGTGT 15 V_SOX18_04_M02905 TRANSFAC + 27540843 27540858 8.0E-06 AAACTAAATTCGAATC 16 V_HOXD8_01_M01432 TRANSFAC + 27539306 27539322 8.0E-06 TAAACAAATATTGTATA 17 V_SMAD3_Q6_M00701 TRANSFAC + 27539269 27539277 3.0E-06 TGTCTGTCT 9 V_SMAD3_Q6_M00701 TRANSFAC + 27539273 27539281 3.0E-06 TGTCTGTCT 9 V_SMAD3_Q6_M00701 TRANSFAC + 27539277 27539285 3.0E-06 TGTCTGTCT 9 V_IRF1_01_M00062 TRANSFAC - 27542498 27542510 1.0E-06 GAAAACCGAAAAC 13 V_IRF1_01_M00062 TRANSFAC - 27545779 27545791 5.0E-06 GAAAAGCAAAAAG 13 V_PAX4_02_M00377 TRANSFAC - 27540002 27540012 5.0E-06 AAAAAATTAAA 11 V_ELF_02_M02053 TRANSFAC + 27541276 27541285 6.0E-06 CCCGGAAATT 10 V_PIT1_Q6_M00802 TRANSFAC - 27545553 27545570 6.0E-06 ATTTCATGCTCAATAAAA 18 V_FOXO4_01_M00472 TRANSFAC + 27539305 27539315 5.0E-06 GTAAACAAATA 11 V_RXRLXRB_01_M01198 TRANSFAC - 27539109 27539121 0.0E+00 AGGTCAAAGGTAA 13 V_ELF5_04_M02241 TRANSFAC - 27543580 27543588 2.0E-06 TATTTCCTT 9 V_HOXA10_01_M01464 TRANSFAC - 27539519 27539534 2.0E-06 ATGATAATAAAACAAA 16 V_MAFK_04_M02880 TRANSFAC + 27541184 27541198 2.0E-06 GAAAAAAGTTCAATG 15 V_CMAF_01_M01070 TRANSFAC - 27543602 27543620 7.0E-06 GGTTTTGCTGTCTCAACAA 19 V_HOXD10_01_M01375 TRANSFAC - 27539518 27539534 1.0E-06 ATGATAATAAAACAAAG 17 V_HOXD10_01_M01375 TRANSFAC - 27540002 27540018 6.0E-06 GATTCAAAAAAATTAAA 17 V_TCF3_05_M02920 TRANSFAC + 27541651 27541665 3.0E-06 ACCCTAAAAAAAAGA 15 V_FEV_01_M02269 TRANSFAC + 27539384 27539391 1.0E-05 CAGGAAAT 8 V_FEV_01_M02269 TRANSFAC - 27545822 27545829 1.0E-05 CAGGAAAT 8 V_ZIC2_04_M02836 TRANSFAC + 27543454 27543468 6.0E-06 GCCTCCCGGGGGTGT 15 V_CDPCR3_01_M00105 TRANSFAC + 27540884 27540898 4.0E-06 CAGAAAGAAATATTG 15 V_STAT1_Q6_M01823 TRANSFAC + 27541259 27541268 4.0E-06 TTACAGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 27541256 27541277 5.0E-06 GAATTACAGGAAAACATCTGCC 22 V_STAT1_05_M01260 TRANSFAC + 27543574 27543595 9.0E-06 AGCTTAAAGGAAATAGGATTTT 22 V_FOXK1_03_M02752 TRANSFAC + 27539300 27539316 0.0E+00 GGAATGTAAACAAATAT 17 V_PAX4_04_M00380 TRANSFAC + 27540841 27540870 6.0E-06 AAAAACTAAATTCGAATCTGCCTACATGCT 30 V_SMAD1_01_M01590 TRANSFAC - 27541289 27541300 7.0E-06 CAAAAGAAAAAA 12 V_SMAD1_01_M01590 TRANSFAC + 27542441 27542452 7.0E-06 CAAGAGAAAGGA 12 V_SPI1_02_M02043 TRANSFAC + 27543579 27543588 8.0E-06 AAAGGAAATA 10 V_TR4_03_M01782 TRANSFAC - 27539109 27539121 0.0E+00 AGGTCAAAGGTAA 13 V_TR4_03_M01782 TRANSFAC - 27539116 27539128 5.0E-06 AGTTGAGAGGTCA 13 V_NANOG_02_M01247 TRANSFAC - 27541285 27541304 0.0E+00 TTTCCAAAAGAAAAAAAGCA 20 V_ELF4_02_M02056 TRANSFAC + 27541276 27541285 4.0E-06 CCCGGAAATT 10 V_OCT4_01_M01125 TRANSFAC + 27541291 27541305 6.0E-06 TTTTCTTTTGGAAAA 15 V_HSF1_Q6_01_M02017 TRANSFAC - 27546032 27546045 1.0E-06 GAACATTCTAGTAA 14 V_PPARG_01_M00512 TRANSFAC - 27539105 27539125 1.0E-06 TGAGAGGTCAAAGGTAAGGGG 21 V_PPARG_01_M00512 TRANSFAC - 27539112 27539132 8.0E-06 AAGGAGTTGAGAGGTCAAAGG 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.