Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GRIK3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
2899 glutamate receptor, ionotropic, kainate 3 chr1 -37499344 - 37504844 37499844

Transcription Factor Binding Sites

 
Download all TFBS in the GRIK3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX8_HMG_DBD_dimeric_16_1 SELEX - 37501684 37501699 6.0E-06 AACATTTTCCAGTGGC 16
EWSR1-FLI1_MA0149.1 JASPAR + 37501798 37501815 8.0E-06 GGAGGAAGTGCAGGAGAG 18
SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 37501905 37501917 5.0E-06 CCGCAACAGGTTT 13
ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 37500760 37500774 0.0E+00 GACCCCCTGCTGTGG 15
Tcfcp2l1_MA0145.1 JASPAR - 37501837 37501850 6.0E-06 CCAGCTATATCCGG 14
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 37495078 37495087 6.0E-06 AGCAGCTGCC 10
ZIC3_C2H2_full_monomeric_15_1 SELEX + 37500760 37500774 0.0E+00 GACCCCCTGCTGTGG 15
SOX14_HMG_DBD_dimeric_13_1 SELEX + 37503901 37503913 7.0E-06 ACAATCGCAGTGA 13
SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 37501905 37501919 9.0E-06 CCGCAACAGGTTTGG 15
SPDEF_ETS_full_monomeric_11_1 SELEX + 37501835 37501845 7.0E-06 TCCCGGATATA 11
ZIC1_C2H2_full_monomeric_14_1 SELEX + 37500760 37500773 0.0E+00 GACCCCCTGCTGTG 14
V_SPI1_01_M01203 TRANSFAC + 37501794 37501810 5.0E-06 GTAAGGAGGAAGTGCAG 17
V_GAF_Q6_M01209 TRANSFAC + 37504002 37504012 9.0E-06 CAGATTCCTAG 11
V_ATF5_01_M01295 TRANSFAC - 37501954 37501964 1.0E-06 TTTCTTCCTTA 11
V_ZFP410_04_M02936 TRANSFAC - 37502203 37502219 5.0E-06 GCTCCCCTCCCCTTATC 17
V_HOXA13_02_M01297 TRANSFAC + 37503586 37503594 9.0E-06 AAATAAAAG 9
V_IRF_Q6_01_M00972 TRANSFAC - 37495008 37495018 8.0E-06 GGAACTGAAAC 11
V_NFAT3_Q3_M01734 TRANSFAC - 37501689 37501698 1.0E-05 ACATTTTCCA 10
V_NKX25_Q6_M02108 TRANSFAC - 37502112 37502122 1.0E-05 GCCACTTGCAG 11
V_E2A_Q2_M00804 TRANSFAC + 37500020 37500033 9.0E-06 CCACCTGCCCCGGC 14
V_PU1_Q4_M01172 TRANSFAC - 37501795 37501813 2.0E-06 CTCCTGCACTTCCTCCTTA 19
V_NKX62_Q2_M00489 TRANSFAC - 37495778 37495789 7.0E-06 GAAGTAAATAGC 12
V_PDEF_02_M02075 TRANSFAC + 37501836 37501845 2.0E-06 CCCGGATATA 10
V_NFAT_Q6_M00302 TRANSFAC + 37501686 37501697 6.0E-06 CACTGGAAAATG 12
V_KROX_Q6_M00982 TRANSFAC + 37500158 37500171 8.0E-06 CCAGCCCCCTCCCC 14
V_MAZ_Q6_01_M02023 TRANSFAC + 37502207 37502220 9.0E-06 AGGGGAGGGGAGCA 14
V_IRF_Q6_M00772 TRANSFAC + 37495004 37495018 7.0E-06 CGCTGTTTCAGTTCC 15
V_PAX5_01_M00143 TRANSFAC - 37504147 37504174 1.0E-06 CCCAGGTGCAGGCTTGTAGAGCAGCCTG 28
V_ASCL2_03_M02737 TRANSFAC - 37495074 37495090 1.0E-06 CACAGCAGCTGCCCCTG 17
V_IK2_01_M00087 TRANSFAC - 37503578 37503589 2.0E-06 ATTTGGGAATGA 12
V_HNF4_DR1_Q3_M00764 TRANSFAC - 37502007 37502019 9.0E-06 TGTCCTTTGCCTC 13
V_LMO2COM_01_M00277 TRANSFAC - 37504164 37504175 1.0E-06 CCCCAGGTGCAG 12
V_CTCF_02_M01259 TRANSFAC + 37501811 37501830 1.0E-05 GAGAGGGCAGCAGAGGGCGC 20
V_BCL6B_04_M02844 TRANSFAC - 37502203 37502218 5.0E-06 CTCCCCTCCCCTTATC 16
V_CNOT3_01_M01253 TRANSFAC - 37501825 37501834 8.0E-06 GGCCGCGCCC 10
V_PDEF_01_M02040 TRANSFAC + 37501836 37501845 3.0E-06 CCCGGATATA 10
V_TCF4_Q5_M00671 TRANSFAC + 37495454 37495461 1.0E-05 CCTTTGAA 8
V_IRF6_04_M02874 TRANSFAC - 37503935 37503949 2.0E-06 ATGAATCTCGGTAAC 15
V_EWSR1FLI1_01_M02252 TRANSFAC + 37501798 37501815 8.0E-06 GGAGGAAGTGCAGGAGAG 18
V_ELF_02_M02053 TRANSFAC + 37501836 37501845 8.0E-06 CCCGGATATA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL