Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GRIA3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
2892 glutamate receptor, ionotropic, AMPA 3 chrX +122313095 - 122318595 122318095

Transcription Factor Binding Sites

 
Download all TFBS in the GRIA3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX + 122318051 122318061 9.0E-06 TTGGTGTGAAG 11
CUX1_CUT_DBD_monomeric_10_1 SELEX + 122317714 122317723 5.0E-06 TGATCAATAT 10
NEUROD2_bHLH_full_dimeric_10_1 SELEX + 122320795 122320804 4.0E-06 GACATATGGT 10
NEUROD2_bHLH_full_dimeric_10_1 SELEX - 122320795 122320804 5.0E-06 ACCATATGTC 10
SPIC_ETS_full_monomeric_14_1 SELEX + 122318196 122318209 2.0E-06 AAGAAGAGGAAGAA 14
POU3F3_POU_DBD_monomeric_12_1 SELEX - 122320901 122320912 2.0E-06 AAGCATATTTTA 12
POU3F2_POU_DBD_monomeric_13_1 SELEX - 122320901 122320913 4.0E-06 AAAGCATATTTTA 13
EWSR1-FLI1_MA0149.1 JASPAR + 122318121 122318138 5.0E-06 GAGAGGGAGCAAGAAAGG 18
EWSR1-FLI1_MA0149.1 JASPAR + 122318125 122318142 4.0E-06 GGGAGCAAGAAAGGAAGA 18
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 122315333 122315344 9.0E-06 GCTAAAAATTGA 12
POU2F2_POU_DBD_monomeric_11_1 SELEX - 122315219 122315229 3.0E-06 ACATGCAAATT 11
Sox1_HMG_DBD_dimeric_13_1 SELEX + 122322101 122322113 2.0E-06 TCACAATCATTGA 13
SPIB_ETS_DBD_monomeric_14_1 SELEX + 122318196 122318209 1.0E-05 AAGAAGAGGAAGAA 14
TEAD1_TEA_full_monomeric_10_1 SELEX - 122320814 122320823 5.0E-06 AACATTCCAT 10
MEF2B_MADS_full_dimeric_12_1 SELEX + 122315333 122315344 7.0E-06 GCTAAAAATTGA 12
HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 122320916 122320925 6.0E-06 AGCCATAAAA 10
BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 122320795 122320804 4.0E-06 ACCATATGTC 10
CUX2_CUT_DBD_monomeric_10_1 SELEX + 122317714 122317723 7.0E-06 TGATCAATAT 10
Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 122317703 122317720 6.0E-06 CAGATCAACTTTGATCAA 18
HOXC11_homeodomain_full_monomeric_11_2 SELEX - 122320915 122320925 3.0E-06 AGCCATAAAAG 11
XBP1_bZIP_DBD_dimeric_14_1 SELEX + 122317693 122317706 2.0E-06 AATTCCACGTCAGA 14
BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 122320794 122320805 6.0E-06 GGACATATGGTT 12
BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 122320794 122320805 5.0E-06 AACCATATGTCC 12
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 122315316 122315325 5.0E-06 AACAGCTGCC 10
OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 122320795 122320804 7.0E-06 GACATATGGT 10
OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 122320795 122320804 6.0E-06 ACCATATGTC 10
TEAD3_TEA_DBD_monomeric_8_1 SELEX - 122320815 122320822 1.0E-05 ACATTCCA 8
Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 122320795 122320804 5.0E-06 GACATATGGT 10
Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 122320795 122320804 5.0E-06 ACCATATGTC 10
Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 122320916 122320924 4.0E-06 GCCATAAAA 9
POU3F1_POU_DBD_monomeric_12_2 SELEX - 122320901 122320912 4.0E-06 AAGCATATTTTA 12
DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 122320243 122320255 2.0E-06 TTGACTCAATCAA 13
POU2F1_POU_DBD_monomeric_12_1 SELEX - 122315219 122315230 4.0E-06 TACATGCAAATT 12
Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 122317362 122317370 4.0E-06 TGCTGTAAA 9
SOX18_HMG_full_dimeric_15_3 SELEX - 122320810 122320824 6.0E-06 AAACATTCCATTCAA 15
NEUROG2_bHLH_full_dimeric_10_1 SELEX - 122320795 122320804 4.0E-06 ACCATATGTC 10
TEAD4_TEA_DBD_monomeric_10_1 SELEX - 122320814 122320823 1.0E-06 AACATTCCAT 10
Sox2_MA0143.1 JASPAR - 122320872 122320886 4.0E-06 TCATTGTTGTGAAAA 15
CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 122320916 122320924 8.0E-06 GCCATAAAA 9
BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 122320795 122320804 4.0E-06 ACCATATGTC 10
TBX1_TBX_DBD_dimeric_20_1 SELEX + 122318052 122318071 0.0E+00 TGGTGTGAAGACAGAAGTGA 20
OLIG2_bHLH_full_dimeric_10_1 SELEX - 122320795 122320804 4.0E-06 ACCATATGTC 10
CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 122320916 122320924 8.0E-06 GCCATAAAA 9
POU4F1_POU_DBD_monomeric_14_1 SELEX - 122320899 122320912 9.0E-06 AAGCATATTTTATA 14
OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 122320795 122320804 4.0E-06 ACCATATGTC 10
V_HOXA9_01_M01351 TRANSFAC - 122320911 122320927 3.0E-06 TCAGCCATAAAAGCAAA 17
V_SPI1_01_M01203 TRANSFAC + 122318196 122318212 8.0E-06 AAGAAGAGGAAGAAGAG 17
V_TGIF_01_M00418 TRANSFAC - 122315325 122315335 9.0E-06 AGCTGTCAGTG 11
V_TCF3_01_M01594 TRANSFAC - 122315336 122315348 6.0E-06 TCTTTCAATTTTT 13
V_DUXL_01_M01390 TRANSFAC - 122320238 122320254 1.0E-06 TGACTCAATCAAGAAGC 17
V_ATF5_01_M01295 TRANSFAC - 122318134 122318144 3.0E-06 TCTCTTCCTTT 11
V_ATF5_01_M01295 TRANSFAC - 122318256 122318266 3.0E-06 ACTCTTCCTTT 11
V_ZFP410_04_M02936 TRANSFAC - 122317290 122317306 7.0E-06 GTGTCCCTCCCCTTAAA 17
V_PAX4_03_M00378 TRANSFAC - 122317329 122317340 3.0E-06 AACCCCCACCCC 12
V_SIX6_02_M01398 TRANSFAC + 122320892 122320908 9.0E-06 AATATGGTATAAAATAT 17
V_STAT3STAT3_Q3_M01220 TRANSFAC + 122317417 122317430 2.0E-06 GTGATGGGAACTGC 14
V_NF1A_Q6_M02103 TRANSFAC - 122320776 122320791 7.0E-06 CAGGCTATTAGCCATT 16
V_HOXA13_02_M01297 TRANSFAC - 122320803 122320811 8.0E-06 AAGTAAAAC 9
V_IK_Q5_M01169 TRANSFAC - 122317307 122317316 3.0E-06 TTTGGGAGGC 10
V_FOXJ1_04_M02854 TRANSFAC + 122320872 122320886 6.0E-06 TTTTCACAACAATGA 15
V_IRF_Q6_01_M00972 TRANSFAC + 122315337 122315347 2.0E-06 AAAATTGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC + 122315335 122315350 5.0E-06 TAAAAATTGAAAGAGT 16
V_OCT1_01_M00135 TRANSFAC - 122315215 122315233 3.0E-06 TAATACATGCAAATTCTTT 19
V_POU2F3_01_M01476 TRANSFAC - 122315216 122315231 4.0E-06 ATACATGCAAATTCTT 16
V_OCT_C_M00210 TRANSFAC + 122315217 122315229 5.0E-06 AGAATTTGCATGT 13
V_HTF_01_M00538 TRANSFAC + 122317689 122317712 1.0E-06 CTTTAATTCCACGTCAGATCAACT 24
V_AP4_Q6_02_M01860 TRANSFAC - 122315312 122315324 1.0E-05 GCAGCTGTTGGCA 13
V_PU1_Q4_M01172 TRANSFAC - 122318131 122318149 4.0E-06 CGCTCTCTCTTCCTTTCTT 19
V_PU1_Q4_M01172 TRANSFAC - 122318191 122318209 5.0E-06 TTCTTCCTCTTCTTCTCTC 19
V_PU1_Q4_M01172 TRANSFAC - 122318197 122318215 0.0E+00 CTCCTCTTCTTCCTCTTCT 19
V_LYF1_01_M00141 TRANSFAC - 122317308 122317316 9.0E-06 TTTGGGAGG 9
V_AP4_Q6_01_M00927 TRANSFAC + 122315316 122315324 1.0E-05 AACAGCTGC 9
V_PAX3_B_M00327 TRANSFAC - 122319821 122319841 6.0E-06 AGCATTTGTCACGGAAAAACT 21
V_STAT4_Q4_M01666 TRANSFAC - 122320801 122320814 8.0E-06 TTCAAGTAAAACCA 14
V_REX1_01_M01695 TRANSFAC - 122320775 122320784 8.0E-06 TTAGCCATTT 10
V_ZNF219_01_M01122 TRANSFAC - 122317323 122317334 7.0E-06 CACCCCCATCCC 12
V_TCF3_04_M02816 TRANSFAC - 122317706 122317722 3.0E-06 TATTGATCAAAGTTGAT 17
V_DOBOX4_01_M01359 TRANSFAC - 122320892 122320908 5.0E-06 ATATTTTATACCATATT 17
V_RSRFC4_Q2_M00407 TRANSFAC + 122315331 122315347 7.0E-06 CAGCTAAAAATTGAAAG 17
V_IRX4_01_M01410 TRANSFAC + 122315219 122315235 9.0E-06 AATTTGCATGTATTATA 17
V_IRF4_04_M02872 TRANSFAC - 122320832 122320846 3.0E-06 AGTATTCTCAGTCTT 15
V_ARID3A_02_M02839 TRANSFAC + 122320894 122320908 9.0E-06 TATGGTATAAAATAT 15
V_MAZ_Q6_01_M02023 TRANSFAC + 122318076 122318089 9.0E-06 GGGGGAAGGGAGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 122318248 122318261 7.0E-06 TGGGGTGGAAAGGA 14
V_IRF_Q6_M00772 TRANSFAC - 122315337 122315351 3.0E-06 CACTCTTTCAATTTT 15
V_MEF2_03_M00232 TRANSFAC + 122315327 122315348 4.0E-06 CTGACAGCTAAAAATTGAAAGA 22
V_SOX18_03_M02801 TRANSFAC - 122320873 122320888 6.0E-06 CCTCATTGTTGTGAAA 16
V_ASCL2_03_M02737 TRANSFAC + 122315313 122315329 2.0E-06 GCCAACAGCTGCCACTG 17
V_ASCL2_03_M02737 TRANSFAC + 122322140 122322156 1.0E-06 CTAGGCAGCTGCTGCTT 17
V_CLOX_01_M00103 TRANSFAC - 122317710 122317724 7.0E-06 GATATTGATCAAAGT 15
V_DUXBL_01_M02968 TRANSFAC - 122320238 122320254 1.0E-06 TGACTCAATCAAGAAGC 17
V_PAX6_Q2_M00979 TRANSFAC - 122317692 122317705 1.0E-06 CTGACGTGGAATTA 14
V_OCT1_04_M00138 TRANSFAC - 122315213 122315235 1.0E-06 TATAATACATGCAAATTCTTTAG 23
V_CDP_02_M00102 TRANSFAC - 122317710 122317724 8.0E-06 GATATTGATCAAAGT 15
V_IRX3_01_M01318 TRANSFAC + 122315219 122315235 6.0E-06 AATTTGCATGTATTATA 17
V_OCT4_02_M01124 TRANSFAC - 122319688 122319702 6.0E-06 TTTCTCATGAAAAGT 15
V_IRX5_01_M01472 TRANSFAC + 122315219 122315235 9.0E-06 AATTTGCATGTATTATA 17
V_HNF4A_02_M02868 TRANSFAC - 122319681 122319696 4.0E-06 ATGAAAAGTCCACCTA 16
V_SOX17_04_M02904 TRANSFAC - 122320805 122320821 1.0E-05 CATTCCATTCAAGTAAA 17
V_HOXD9_Q2_M01834 TRANSFAC - 122320916 122320925 6.0E-06 AGCCATAAAA 10
V_BCL6B_04_M02844 TRANSFAC - 122317290 122317305 2.0E-06 TGTCCCTCCCCTTAAA 16
V_BCL6B_04_M02844 TRANSFAC - 122318279 122318294 4.0E-06 ACCCCCTCCCCTTAAC 16
V_ELF1_Q6_M00746 TRANSFAC + 122318197 122318208 2.0E-06 AGAAGAGGAAGA 12
V_IRX3_02_M01485 TRANSFAC - 122320841 122320857 7.0E-06 AGCTTACATGAAGTATT 17
V_CAAT_01_M00254 TRANSFAC + 122318025 122318036 7.0E-06 TGCAGCCAATGA 12
V_ATF1_Q6_M00691 TRANSFAC + 122322038 122322048 8.0E-06 CTCTGAAGACA 11
V_ALPHACP1_01_M00687 TRANSFAC + 122318027 122318037 1.0E-05 CAGCCAATGAA 11
V_TAL1_01_M01591 TRANSFAC - 122318190 122318202 7.0E-06 TCTTCTTCTCTCT 13
V_TAL1_01_M01591 TRANSFAC - 122322046 122322058 8.0E-06 TTTCCTCCTCTGT 13
V_OCT2_01_M01368 TRANSFAC - 122315216 122315231 7.0E-06 ATACATGCAAATTCTT 16
V_OCT1_Q6_M00195 TRANSFAC - 122315217 122315231 1.0E-06 ATACATGCAAATTCT 15
V_LUN1_01_M00480 TRANSFAC - 122317310 122317326 4.0E-06 TCCCCGCAGCTTTGGGA 17
V_HDX_01_M01333 TRANSFAC + 122322098 122322114 3.0E-06 ATGTCACAATCATTGAA 17
V_CPHX_01_M01478 TRANSFAC + 122320243 122320256 1.0E-05 TTGATTGAGTCAAT 14
V_FPM315_01_M01587 TRANSFAC + 122318227 122318238 3.0E-06 GGAGGAGGAGGA 12
V_FPM315_01_M01587 TRANSFAC + 122318230 122318241 3.0E-06 GGAGGAGGAGGA 12
V_PLZF_02_M01075 TRANSFAC + 122317695 122317723 9.0E-06 TTCCACGTCAGATCAACTTTGATCAATAT 29
V_ZFP281_01_M01597 TRANSFAC + 122317327 122317337 1.0E-06 TGGGGGTGGGG 11
V_IRX2_01_M01405 TRANSFAC + 122315219 122315235 9.0E-06 AATTTGCATGTATTATA 17
V_OCT1_07_M00248 TRANSFAC - 122315219 122315230 3.0E-06 TACATGCAAATT 12
V_IRF1_Q6_01_M01881 TRANSFAC - 122315336 122315349 2.0E-06 CTCTTTCAATTTTT 14
V_SOX2_01_M02246 TRANSFAC - 122320872 122320886 4.0E-06 TCATTGTTGTGAAAA 15
V_ZFP281_04_M02831 TRANSFAC - 122317325 122317339 2.0E-06 ACCCCCACCCCCATC 15
V_EWSR1FLI1_01_M02252 TRANSFAC + 122318121 122318138 5.0E-06 GAGAGGGAGCAAGAAAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC + 122318125 122318142 4.0E-06 GGGAGCAAGAAAGGAAGA 18
V_SOX12_03_M02796 TRANSFAC - 122320873 122320886 1.0E-06 TCATTGTTGTGAAA 14
V_MAFK_04_M02880 TRANSFAC + 122315334 122315348 1.0E-06 CTAAAAATTGAAAGA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL