Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TOR1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27348 torsin family 1, member B (torsin B) chr9 + 132560431 - 132565931 132565431 Transcription Factor Binding Sites   Download all TFBS in the TOR1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 132566302 132566317 3.0E-06 ATGCATTTTTAAGGTC 16 SP8_C2H2_DBD_monomeric_12_1 SELEX - 132565386 132565397 9.0E-06 GACCCGCCCACT 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 132566302 132566313 6.0E-06 ATGCATTTTTAA 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 132561520 132561537 5.0E-06 GAGGGTCAAAGGAGGTGA 18 En1_MA0027.1 JASPAR + 132566008 132566018 0.0E+00 AAGTAGTTTTC 11 SRY_HMG_DBD_dimeric_13_2 SELEX + 132561366 132561378 6.0E-06 TGAATATCAGTTA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 132561452 132561464 9.0E-06 AGACAACAAACAT 13 SOX9_HMG_full_dimeric_17_3 SELEX + 132561364 132561380 6.0E-06 GATGAATATCAGTTACT 17 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX - 132565622 132565638 8.0E-06 GATGTCATTGTAGGACA 17 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 132561521 132561537 2.0E-06 AGGGTCAAAGGAGGTGA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 132561520 132561537 2.0E-06 GAGGGTCAAAGGAGGTGA 18 SOX7_HMG_full_dimeric_17_2 SELEX + 132561364 132561380 6.0E-06 GATGAATATCAGTTACT 17 EBF1_MA0154.1 JASPAR + 132565377 132565386 5.0E-06 CCCCAAGGGA 10 SOX15_HMG_full_dimeric_15_3 SELEX + 132561365 132561379 2.0E-06 ATGAATATCAGTTAC 15 POU4F3_POU_DBD_monomeric_16_1 SELEX + 132566302 132566317 6.0E-06 ATGCATTTTTAAGGTC 16 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 132565381 132565396 3.0E-06 ACCCGCCCACTCCCTT 16 Sox17_HMG_DBD_dimeric_15_2 SELEX + 132561365 132561379 1.0E-06 ATGAATATCAGTTAC 15 Sox17_HMG_DBD_dimeric_15_2 SELEX - 132561365 132561379 9.0E-06 GTAACTGATATTCAT 15 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 132561453 132561463 7.0E-06 GACAACAAACA 11 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 132561521 132561537 1.0E-06 AGGGTCAAAGGAGGTGA 17 SOX2_HMG_full_dimeric_15_1 SELEX + 132561365 132561379 1.0E-06 ATGAATATCAGTTAC 15 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 132565064 132565073 5.0E-06 ATCACCTGAT 10 POU2F3_POU_DBD_dimeric_12_1 SELEX - 132566302 132566313 9.0E-06 TTAAAAATGCAT 12 ZIC3_C2H2_full_monomeric_15_1 SELEX - 132565719 132565733 7.0E-06 CGCCCCCCGCAGCGC 15 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 132565064 132565073 4.0E-06 ATCACCTGAT 10 SOX14_HMG_DBD_dimeric_15_1 SELEX + 132561365 132561379 1.0E-06 ATGAATATCAGTTAC 15 PBX1_MA0070.1 JASPAR - 132561357 132561368 3.0E-06 TCATCAAGCAAA 12 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 132561521 132561537 3.0E-06 AGGGTCAAAGGAGGTGA 17 POU1F1_POU_DBD_monomeric_17_1 SELEX + 132566299 132566315 1.0E-06 CTGATGCATTTTTAAGG 17 POU3F1_POU_DBD_monomeric_12_2 SELEX + 132566302 132566313 4.0E-06 ATGCATTTTTAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 132566302 132566313 1.0E-05 TTAAAAATGCAT 12 SOX18_HMG_full_dimeric_15_3 SELEX + 132561365 132561379 1.0E-05 ATGAATATCAGTTAC 15 ETS1_ETS_full_dimeric_18_1 SELEX - 132565420 132565437 3.0E-06 GCAGGACGGACTTCCTCT 18 ETV6_ETS_full_monomeric_10_1 SELEX + 132565403 132565412 9.0E-06 GGCGGAAGTG 10 IRF3_IRF_full_trimeric_21_1 SELEX + 132565278 132565298 2.0E-06 TTTAAAAGAAAAGGGAAACAA 21 IRF3_IRF_full_trimeric_21_1 SELEX + 132565283 132565303 6.0E-06 AAGAAAAGGGAAACAAAACAG 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 132561451 132561463 1.0E-06 AAGACAACAAACA 13 TBX1_TBX_DBD_dimeric_20_1 SELEX + 132561520 132561539 8.0E-06 GAGGGTCAAAGGAGGTGATA 20 Sox1_HMG_DBD_dimeric_15_2 SELEX + 132561365 132561379 1.0E-06 ATGAATATCAGTTAC 15 POU4F1_POU_DBD_monomeric_14_1 SELEX + 132566302 132566315 3.0E-06 ATGCATTTTTAAGG 14 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 132565462 132565479 9.0E-06 AGCCCGCAGAAGCCACTG 18 V_HNF3B_01_M00131 TRANSFAC + 132565160 132565174 6.0E-06 TTAGATATTTTTTCA 15 V_DBX1_01_M01483 TRANSFAC - 132565154 132565170 9.0E-06 AAAATATCTAAAAAAAA 17 V_ZFP410_04_M02936 TRANSFAC + 132565349 132565365 7.0E-06 CCTCTCCGCCCCTCACC 17 V_NRSF_Q4_M01028 TRANSFAC + 132565525 132565543 8.0E-06 GCGCTGGCGCTGCTGCTGG 19 V_CEBP_Q3_M00770 TRANSFAC + 132561381 132561392 4.0E-06 GAGTTTTGTAAT 12 V_BCL6_01_M01183 TRANSFAC + 132565154 132565169 8.0E-06 TTTTTTTTAGATATTT 16 V_BCL6_01_M01183 TRANSFAC + 132565156 132565171 0.0E+00 TTTTTTAGATATTTTT 16 V_BCL6_01_M01183 TRANSFAC + 132565157 132565172 0.0E+00 TTTTTAGATATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 132565268 132565283 1.0E-06 TTTAAAAAAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 132565269 132565284 0.0E+00 TTTTAAAAAAATTTTT 16 V_BCL6_01_M01183 TRANSFAC - 132565270 132565285 1.0E-06 CTTTTAAAAAAATTTT 16 V_BCL6_01_M01183 TRANSFAC - 132565271 132565286 8.0E-06 TCTTTTAAAAAAATTT 16 V_ETS_B_M00340 TRANSFAC + 132565419 132565432 2.0E-06 GAGAGGAAGTCCGT 14 V_IK_Q5_M01169 TRANSFAC - 132565219 132565228 3.0E-06 TTTGGGAGGC 10 V_ISL2_01_M01328 TRANSFAC - 132566003 132566018 1.0E-05 GAAAACTACTTAATAG 16 V_IRF_Q6_01_M00972 TRANSFAC + 132565286 132565296 8.0E-06 AAAAGGGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC + 132565284 132565299 2.0E-06 AGAAAAGGGAAACAAA 16 V_IRF3_05_M02767 TRANSFAC + 132565285 132565298 7.0E-06 GAAAAGGGAAACAA 14 V_PITX2_Q6_M02114 TRANSFAC + 132561387 132561396 9.0E-06 TGTAATTCCA 10 V_PITX2_Q6_M02114 TRANSFAC - 132565233 132565242 1.0E-06 TGTAATCCCA 10 V_LYF1_01_M00141 TRANSFAC - 132565220 132565228 9.0E-06 TTTGGGAGG 9 V_BRN2_01_M00145 TRANSFAC - 132561351 132561366 8.0E-06 ATCAAGCAAAATACAC 16 V_TCFAP2E_04_M02926 TRANSFAC - 132565152 132565165 0.0E+00 ATCTAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 132565153 132565166 2.0E-06 TATCTAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 132565165 132565178 3.0E-06 AGAGTGAAAAAATA 14 V_RPC155_01_M01798 TRANSFAC - 132565047 132565062 0.0E+00 TCAGGAGTTCGAGACC 16 V_ELF4_04_M02850 TRANSFAC - 132565149 132565165 2.0E-06 ATCTAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 132565150 132565166 0.0E+00 TATCTAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 132565267 132565283 7.0E-06 TTTAAAAAAATTTTTTC 17 V_ELF4_04_M02850 TRANSFAC - 132565268 132565284 1.0E-06 TTTTAAAAAAATTTTTT 17 V_ELF4_04_M02850 TRANSFAC - 132565269 132565285 2.0E-06 CTTTTAAAAAAATTTTT 17 V_ELF4_04_M02850 TRANSFAC - 132565270 132565286 2.0E-06 TCTTTTAAAAAAATTTT 17 V_ELF4_04_M02850 TRANSFAC - 132565272 132565288 9.0E-06 TTTCTTTTAAAAAAATT 17 V_SOX13_03_M02797 TRANSFAC - 132565268 132565283 3.0E-06 TTTAAAAAAATTTTTT 16 V_GC_01_M00255 TRANSFAC + 132565386 132565399 7.0E-06 AGTGGGCGGGTCTG 14 V_MECP2_01_M01298 TRANSFAC + 132565260 132565274 3.0E-06 CCGGCCCGAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 132565151 132565165 3.0E-06 ATCTAAAAAAAAAAA 15 V_HNF3G_Q4_M02015 TRANSFAC - 132561456 132561463 7.0E-06 TGTTTGTT 8 V_SREBP1_01_M00220 TRANSFAC - 132565064 132565074 2.0E-06 GATCACCTGAT 11 V_NKX26_01_M01322 TRANSFAC + 132561322 132561337 3.0E-06 CAATCCACTTGTGTCT 16 V_ZBTB7B_04_M02930 TRANSFAC + 132561287 132561303 1.0E-06 CTTACGACCACCACAAT 17 V_MRF2_01_M00454 TRANSFAC - 132561350 132561363 2.0E-06 AAGCAAAATACACA 14 Hand1_Tcfe2a_MA0092.1 JASPAR - 132561391 132561400 7.0E-06 GATCTGGAAT 10 V_KROX_Q6_M00982 TRANSFAC - 132565730 132565743 4.0E-06 CGCGCCCCCGCGCC 14 V_KROX_Q6_M00982 TRANSFAC - 132565738 132565751 4.0E-06 CGCGCCCCCGCGCC 14 V_PXRRXR_02_M01153 TRANSFAC - 132561561 132561568 1.0E-05 AGAGTTCA 8 V_IRF3_Q3_M01279 TRANSFAC - 132565287 132565299 0.0E+00 TTTGTTTCCCTTT 13 V_MAZ_Q6_01_M02023 TRANSFAC - 132565345 132565358 8.0E-06 GGCGGAGAGGAGGG 14 V_IRF_Q6_M00772 TRANSFAC - 132565286 132565300 3.0E-06 TTTTGTTTCCCTTTT 15 V_OCT1_04_M00138 TRANSFAC - 132565151 132565173 2.0E-06 GAAAAAATATCTAAAAAAAAAAA 23 V_EBF1_01_M02267 TRANSFAC + 132565377 132565386 5.0E-06 CCCCAAGGGA 10 V_STAT4_Q5_M02117 TRANSFAC + 132565279 132565288 2.0E-06 TTAAAAGAAA 10 V_TBP_06_M02814 TRANSFAC - 132565272 132565287 2.0E-06 TTCTTTTAAAAAAATT 16 V_BCL6B_04_M02844 TRANSFAC + 132565350 132565365 9.0E-06 CTCTCCGCCCCTCACC 16 V_YY1_03_M02044 TRANSFAC - 132565365 132565376 5.0E-06 GCGGCCATGTTG 12 V_CIZ_01_M00734 TRANSFAC - 132565165 132565173 3.0E-06 GAAAAAATA 9 V_CIZ_01_M00734 TRANSFAC + 132565267 132565275 5.0E-06 GAAAAAATT 9 V_MTF1_06_M02882 TRANSFAC - 132565152 132565165 1.0E-06 ATCTAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 132565154 132565167 4.0E-06 ATATCTAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 132565156 132565169 5.0E-06 AAATATCTAAAAAA 14 V_HAND1E47_01_M00222 TRANSFAC - 132561390 132561405 3.0E-06 AGATAGATCTGGAATT 16 V_NKX25_03_M01414 TRANSFAC + 132561322 132561337 5.0E-06 CAATCCACTTGTGTCT 16 V_FOXL1_02_M02857 TRANSFAC - 132565152 132565167 7.0E-06 ATATCTAAAAAAAAAA 16 V_NKX3A_02_M01383 TRANSFAC - 132566003 132566019 4.0E-06 TGAAAACTACTTAATAG 17 V_BDP1_01_M01796 TRANSFAC + 132565047 132565058 2.0E-06 GGTCTCGAACTC 12 V_NKX22_01_M00485 TRANSFAC + 132566006 132566015 0.0E+00 TTAAGTAGTT 10 V_SPIC_02_M02077 TRANSFAC + 132565420 132565429 6.0E-06 AGAGGAAGTC 10 V_STAT1STAT1_Q3_M01212 TRANSFAC + 132565277 132565289 4.0E-06 TTTTAAAAGAAAA 13 V_PITX2_Q2_M00482 TRANSFAC - 132565232 132565242 1.0E-06 TGTAATCCCAG 11 V_ETS1_B_M00339 TRANSFAC + 132565420 132565434 9.0E-06 AGAGGAAGTCCGTCC 15 V_SRF_06_M02916 TRANSFAC - 132565149 132565165 0.0E+00 ATCTAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 132565150 132565166 2.0E-06 TATCTAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 132565151 132565167 9.0E-06 ATATCTAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 132565269 132565285 2.0E-06 CTTTTAAAAAAATTTTT 17 V_FOXJ2_01_M00422 TRANSFAC + 132561451 132561468 2.0E-06 AAGACAACAAACATTTCC 18 V_ARP1_01_M00155 TRANSFAC + 132565052 132565067 4.0E-06 CGAACTCCTGACATCA 16 V_MAFK_04_M02880 TRANSFAC - 132566300 132566314 5.0E-06 CTTAAAAATGCATCA 15 V_PBX1_04_M01357 TRANSFAC - 132561356 132561372 7.0E-06 ATATTCATCAAGCAAAA 17 V_TCF3_05_M02920 TRANSFAC - 132565152 132565166 2.0E-06 TATCTAAAAAAAAAA 15 V_PAX4_04_M00380 TRANSFAC - 132565143 132565172 5.0E-06 AAAAAATATCTAAAAAAAAAAAAAAAAATT 30 V_RFX1_02_M00281 TRANSFAC - 132568655 132568672 9.0E-06 AAGACACTCAAGCAACAA 18 V_SPIB_03_M02076 TRANSFAC + 132565420 132565429 7.0E-06 AGAGGAAGTC 10 V_CEBPA_Q6_M01866 TRANSFAC + 132561381 132561393 4.0E-06 GAGTTTTGTAATT 13 V_NANOG_02_M01247 TRANSFAC - 132561462 132561481 8.0E-06 TTTAGCTCACAAAGGAAATG 20 V_NANOG_02_M01247 TRANSFAC + 132565276 132565295 6.0E-06 TTTTTAAAAGAAAAGGGAAA 20 V_NKX21_01_M01312 TRANSFAC + 132561322 132561337 9.0E-06 CAATCCACTTGTGTCT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.