Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OR4E2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 26686 chr14 + 22128296 - 22138296 0 Transcription Factor Binding Sites   Download all TFBS in the OR4E2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 22136754 22136766 2.0E-06 GTAAACATGAATA 13 CUX1_CUT_DBD_monomeric_10_1 SELEX - 22136642 22136651 3.0E-06 TGATCAATAA 10 Foxa2_MA0047.2 JASPAR + 22137727 22137738 1.0E-06 TGTTTACATAAG 12 POU2F1_POU_DBD_dimeric_14_1 SELEX + 22137729 22137742 9.0E-06 TTTACATAAGCATC 14 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 22136932 22136943 7.0E-06 AGTCATAAATAC 12 FOXA1_MA0148.1 JASPAR + 22137727 22137737 5.0E-06 TGTTTACATAA 11 En1_MA0027.1 JASPAR + 22136918 22136928 2.0E-06 AAGTTGTTTTC 11 FOXO3_MA0157.1 JASPAR + 22136753 22136760 7.0E-06 TGTAAACA 8 FOXO3_MA0157.1 JASPAR - 22137727 22137734 7.0E-06 TGTAAACA 8 FOXD1_MA0031.1 JASPAR + 22136754 22136761 7.0E-06 GTAAACAT 8 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 22136751 22136761 6.0E-06 TTTGTAAACAT 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 22137726 22137736 9.0E-06 TATGTAAACAG 11 TEAD1_TEA_full_monomeric_10_1 SELEX + 22136815 22136824 1.0E-06 CACATTCCAT 10 REL_MA0101.1 JASPAR - 22136671 22136680 3.0E-06 TGGGATTTCC 10 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 22136933 22136942 5.0E-06 GTCATAAATA 10 CUX2_CUT_DBD_monomeric_10_1 SELEX - 22136642 22136651 3.0E-06 TGATCAATAA 10 RELA_MA0107.1 JASPAR - 22136671 22136680 7.0E-06 TGGGATTTCC 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 22136933 22136943 8.0E-06 AGTCATAAATA 11 POU2F3_POU_DBD_dimeric_12_1 SELEX - 22137730 22137741 9.0E-06 ATGCTTATGTAA 12 ONECUT2_CUT_DBD_monomeric_14_1 SELEX - 22136641 22136654 1.0E-05 GTATGATCAATAAA 14 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 22136933 22136943 5.0E-06 AGTCATAAATA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 22136757 22136773 1.0E-05 AACATGAATATGAGATG 17 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 22136816 22136823 1.0E-05 ACATTCCA 8 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 22136933 22136942 8.0E-06 GTCATAAATA 10 FOXO3_forkhead_full_dimeric_14_1 SELEX - 22136754 22136767 9.0E-06 ATATTCATGTTTAC 14 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 22136933 22136943 8.0E-06 AGTCATAAATA 11 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 22136815 22136824 1.0E-06 CACATTCCAT 10 FOXB1_forkhead_full_monomeric_9_1 SELEX + 22136753 22136761 3.0E-06 TGTAAACAT 9 POU3F3_POU_DBD_dimeric_12_1 SELEX + 22137730 22137741 7.0E-06 TTACATAAGCAT 12 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 22136754 22136767 2.0E-06 ATATTCATGTTTAC 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 22136754 22136766 3.0E-06 GTAAACATGAATA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 22136751 22136761 4.0E-06 TTTGTAAACAT 11 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 22137726 22137736 4.0E-06 TATGTAAACAG 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 22136641 22136654 8.0E-06 GTATGATCAATAAA 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 22136754 22136767 3.0E-06 ATATTCATGTTTAC 14 V_NFKAPPAB65_01_M00052 TRANSFAC - 22136671 22136680 4.0E-06 TGGGATTTCC 10 V_FREAC7_01_M00293 TRANSFAC - 22136929 22136944 6.0E-06 TAGTCATAAATACTTA 16 V_CDX2_Q5_01_M01659 TRANSFAC - 22136932 22136942 3.0E-06 GTCATAAATAC 11 V_POU3F3_01_M03090 TRANSFAC + 22136755 22136771 5.0E-06 TAAACATGAATATGAGA 17 V_FOXO3_02_M02270 TRANSFAC + 22136753 22136760 7.0E-06 TGTAAACA 8 V_FOXO3_02_M02270 TRANSFAC - 22137727 22137734 7.0E-06 TGTAAACA 8 V_SOX14_05_M02902 TRANSFAC + 22136870 22136884 7.0E-06 TATAGACAATGGTTT 15 V_FOXA2_04_M02749 TRANSFAC + 22136749 22136765 8.0E-06 CTTTTGTAAACATGAAT 17 V_NKX29_01_M01352 TRANSFAC + 22136940 22136956 9.0E-06 GACTAAGTACTTAACAG 17 V_FOXO4_02_M00476 TRANSFAC + 22136918 22136931 8.0E-06 AAGTTGTTTTCTAA 14 V_OCTAMER_01_M01324 TRANSFAC + 22136755 22136771 5.0E-06 TAAACATGAATATGAGA 17 V_FOXO3A_Q1_M01137 TRANSFAC + 22136753 22136764 9.0E-06 TGTAAACATGAA 12 V_FOXO3A_Q1_M01137 TRANSFAC - 22136918 22136929 6.0E-06 AGAAAACAACTT 12 V_FOXO3A_Q1_M01137 TRANSFAC - 22137723 22137734 9.0E-06 TGTAAACAGCTT 12 V_BRN2_01_M00145 TRANSFAC - 22136726 22136741 7.0E-06 CACATTGGAAATCATC 16 V_SOX13_03_M02797 TRANSFAC + 22136969 22136984 6.0E-06 CTAAGAACAATATTGG 16 V_POU3F2_01_M00463 TRANSFAC + 22136682 22136695 6.0E-06 CTGCATTTAAGCAT 14 V_DBP_Q6_01_M01872 TRANSFAC - 22137730 22137737 5.0E-06 TTATGTAA 8 V_TEF_Q6_M00672 TRANSFAC - 22137730 22137741 2.0E-06 ATGCTTATGTAA 12 V_XFD3_01_M00269 TRANSFAC + 22136751 22136764 8.0E-06 TTTGTAAACATGAA 14 V_CREL_01_M00053 TRANSFAC - 22136671 22136680 3.0E-06 TGGGATTTCC 10 V_HES1_Q2_M01009 TRANSFAC + 22136622 22136636 9.0E-06 AGACCTTGTGGCTCA 15 V_HOXD12_01_M01380 TRANSFAC - 22136930 22136946 2.0E-06 CTTAGTCATAAATACTT 17 V_HNF3A_01_M01261 TRANSFAC - 22137726 22137735 3.0E-06 ATGTAAACAG 10 V_HOXC11_01_M01329 TRANSFAC - 22136931 22136946 7.0E-06 CTTAGTCATAAATACT 16 V_SOX18_03_M02801 TRANSFAC - 22136968 22136983 6.0E-06 CAATATTGTTCTTAGA 16 V_HOXD11_01_M01434 TRANSFAC - 22136930 22136946 2.0E-06 CTTAGTCATAAATACTT 17 V_CLOX_01_M00103 TRANSFAC + 22136641 22136655 6.0E-06 TTTATTGATCATACA 15 V_PBX1_01_M00096 TRANSFAC - 22136641 22136649 5.0E-06 ATCAATAAA 9 V_HOXC12_01_M01437 TRANSFAC - 22136930 22136946 7.0E-06 CTTAGTCATAAATACTT 17 V_PAX8_01_M00717 TRANSFAC + 22136994 22137008 1.0E-05 CTTAGTTGAGTGAAT 15 V_XFD2_01_M00268 TRANSFAC + 22136751 22136764 3.0E-06 TTTGTAAACATGAA 14 V_CDP_02_M00102 TRANSFAC + 22136641 22136655 6.0E-06 TTTATTGATCATACA 15 V_NKX3A_01_M00451 TRANSFAC + 22136926 22136937 4.0E-06 TTCTAAGTATTT 12 V_HOXA11_01_M01378 TRANSFAC - 22136931 22136946 5.0E-06 CTTAGTCATAAATACT 16 V_ISGF4G_04_M02875 TRANSFAC + 22136753 22136766 8.0E-06 TGTAAACATGAATA 14 V_NKX23_01_M01457 TRANSFAC + 22136940 22136955 4.0E-06 GACTAAGTACTTAACA 16 V_NKX23_01_M01457 TRANSFAC - 22136940 22136955 0.0E+00 TGTTAAGTACTTAGTC 16 V_NKX32_02_M01482 TRANSFAC + 22136941 22136957 5.0E-06 ACTAAGTACTTAACAGT 17 V_GR_Q6_02_M01836 TRANSFAC - 22136714 22136726 3.0E-06 CAGTTTGTTCTCA 13 V_FOXL1_04_M02753 TRANSFAC + 22136749 22136765 5.0E-06 CTTTTGTAAACATGAAT 17 V_NKX3A_02_M01383 TRANSFAC - 22136939 22136955 3.0E-06 TGTTAAGTACTTAGTCA 17 V_NKX3A_02_M01383 TRANSFAC + 22136940 22136956 0.0E+00 GACTAAGTACTTAACAG 17 V_CDP_01_M00095 TRANSFAC + 22136975 22136986 1.0E-05 ACAATATTGGAT 12 V_NKX22_01_M00485 TRANSFAC - 22136944 22136953 1.0E-06 TTAAGTACTT 10 V_FOXO3_01_M00477 TRANSFAC + 22136918 22136931 4.0E-06 AAGTTGTTTTCTAA 14 V_FOXA2_03_M02260 TRANSFAC + 22137727 22137738 1.0E-06 TGTTTACATAAG 12 V_STAT6_02_M00500 TRANSFAC - 22136670 22136677 1.0E-05 GATTTCCT 8 V_LMO2COM_02_M00278 TRANSFAC - 22136775 22136783 1.0E-05 CAGATAACG 9 V_TITF1_Q3_M00432 TRANSFAC - 22137624 22137633 4.0E-06 TCTCAAGTAT 10 V_FOXO1_04_M01969 TRANSFAC + 22136606 22136625 1.0E-06 CTAAAAATCATGATGTAGAC 20 V_HOXC10_01_M01361 TRANSFAC - 22136931 22136946 2.0E-06 CTTAGTCATAAATACT 16 V_SOX12_03_M02796 TRANSFAC - 22136968 22136981 5.0E-06 ATATTGTTCTTAGA 14 V_SRY_05_M02917 TRANSFAC + 22136968 22136984 3.0E-06 TCTAAGAACAATATTGG 17 V_FREAC4_01_M00292 TRANSFAC - 22137723 22137738 1.0E-06 CTTATGTAAACAGCTT 16 V_TCF11MAFG_01_M00284 TRANSFAC + 22136933 22136954 2.0E-06 TATTTATGACTAAGTACTTAAC 22 V_ATATA_B_M00311 TRANSFAC + 22137730 22137739 1.0E-05 TTACATAAGC 10 V_FOXK1_03_M02752 TRANSFAC + 22136749 22136765 8.0E-06 CTTTTGTAAACATGAAT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.